Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm45315-201ENSMUST00000209283 333 ntBASIC3.6□□□□□ -1.83
Col8a1Q00780 AC155712.1-201ENSMUST00000219704 160 ntBASIC3.6□□□□□ -1.83
Col8a1Q00780 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
Col8a1Q00780 AC160130.1-201ENSMUST00000220734 2735 ntBASIC3.6□□□□□ -1.83
Col8a1Q00780 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Col8a1Q00780 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC3.6□□□□□ -1.83
Col8a1Q00780 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Col8a1Q00780 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
Col8a1Q00780 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Col8a1Q00780 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
Col8a1Q00780 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Col8a1Q00780 Olfr646-202ENSMUST00000214099 3778 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Col8a1Q00780 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Col8a1Q00780 Gm23271-201ENSMUST00000104052 124 ntBASIC3.59□□□□□ -1.83
Col8a1Q00780 Gm6274-201ENSMUST00000118173 797 ntBASIC3.59□□□□□ -1.83
Col8a1Q00780 Defa-ps9-201ENSMUST00000118264 276 ntBASIC3.59□□□□□ -1.83
Col8a1Q00780 Gm13541-201ENSMUST00000119519 283 ntBASIC3.59□□□□□ -1.83
Col8a1Q00780 Gm14008-201ENSMUST00000120483 274 ntBASIC3.59□□□□□ -1.83
Col8a1Q00780 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC3.59□□□□□ -1.83
Col8a1Q00780 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC3.59□□□□□ -1.83
Col8a1Q00780 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Col8a1Q00780 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Col8a1Q00780 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC3.59□□□□□ -1.83
Col8a1Q00780 Gm25720-201ENSMUST00000157503 105 ntBASIC3.59□□□□□ -1.83
Col8a1Q00780 Gm25908-201ENSMUST00000157624 98 ntBASIC3.59□□□□□ -1.83
Col8a1Q00780 Gm25664-201ENSMUST00000157697 107 ntBASIC3.59□□□□□ -1.83
Col8a1Q00780 Nron-204ENSMUST00000158971 370 ntBASIC3.59□□□□□ -1.83
Col8a1Q00780 Gm16545-201ENSMUST00000161968 463 ntBASIC3.59□□□□□ -1.83
Col8a1Q00780 Gm17052-201ENSMUST00000165496 289 ntBASIC3.59□□□□□ -1.83
Col8a1Q00780 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Col8a1Q00780 Gm28453-203ENSMUST00000187041 189 ntBASIC3.59□□□□□ -1.83
Col8a1Q00780 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC3.59□□□□□ -1.83
Col8a1Q00780 Gm37763-201ENSMUST00000193445 120 ntBASIC3.59□□□□□ -1.83
Col8a1Q00780 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC3.59□□□□□ -1.83
Col8a1Q00780 Gm44844-201ENSMUST00000207242 336 ntBASIC3.59□□□□□ -1.83
Col8a1Q00780 AC188459.1-201ENSMUST00000216651 300 ntBASIC3.59□□□□□ -1.83
Col8a1Q00780 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC3.59□□□□□ -1.83
Col8a1Q00780 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Col8a1Q00780 Gm24147-201ENSMUST00000082763 144 ntBASIC3.59□□□□□ -1.83
Col8a1Q00780 Mir181b-2-201ENSMUST00000083644 89 ntBASIC3.59□□□□□ -1.83
Col8a1Q00780 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Col8a1Q00780 Gm43705-201ENSMUST00000195958 3717 ntBASIC3.59□□□□□ -1.84
Col8a1Q00780 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Col8a1Q00780 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
Col8a1Q00780 Gm43888-201ENSMUST00000204405 2587 ntBASIC3.58□□□□□ -1.84
Col8a1Q00780 Gm37412-201ENSMUST00000194866 4321 ntBASIC3.58□□□□□ -1.84
Col8a1Q00780 Gm37718-201ENSMUST00000191655 2631 ntBASIC3.58□□□□□ -1.84
Col8a1Q00780 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Col8a1Q00780 Mir687-201ENSMUST00000102166 89 ntBASIC3.58□□□□□ -1.84
Col8a1Q00780 Gm23319-201ENSMUST00000104467 131 ntBASIC3.58□□□□□ -1.84
Col8a1Q00780 Gm12568-201ENSMUST00000117362 624 ntBASIC3.58□□□□□ -1.84
Col8a1Q00780 Gm14299-201ENSMUST00000117586 397 ntBASIC3.58□□□□□ -1.84
Col8a1Q00780 Gm8200-201ENSMUST00000122390 222 ntBASIC3.58□□□□□ -1.84
Col8a1Q00780 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC3.58□□□□□ -1.84
Col8a1Q00780 Hba-ps4-201ENSMUST00000128900 447 ntBASIC3.58□□□□□ -1.84
Col8a1Q00780 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Col8a1Q00780 Gm26347-201ENSMUST00000157526 131 ntBASIC3.58□□□□□ -1.84
Col8a1Q00780 Gm23084-201ENSMUST00000157850 114 ntBASIC3.58□□□□□ -1.84
Col8a1Q00780 Gm22968-201ENSMUST00000157955 118 ntBASIC3.58□□□□□ -1.84
Col8a1Q00780 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Col8a1Q00780 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Col8a1Q00780 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Col8a1Q00780 Gm20534-201ENSMUST00000172957 172 ntBASIC3.58□□□□□ -1.84
Col8a1Q00780 Gm4479-201ENSMUST00000178807 171 ntBASIC3.58□□□□□ -1.84
Col8a1Q00780 Gm25450-201ENSMUST00000179144 107 ntBASIC3.58□□□□□ -1.84
Col8a1Q00780 Gm27476-201ENSMUST00000183366 104 ntBASIC3.58□□□□□ -1.84
Col8a1Q00780 Gm19427-201ENSMUST00000183619 208 ntBASIC3.58□□□□□ -1.84
Col8a1Q00780 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC3.58□□□□□ -1.84
Col8a1Q00780 Gm43250-201ENSMUST00000196536 273 ntBASIC3.58□□□□□ -1.84
Col8a1Q00780 Gm9379-201ENSMUST00000196790 646 ntBASIC3.58□□□□□ -1.84
Col8a1Q00780 Gm43583-201ENSMUST00000199235 303 ntBASIC3.58□□□□□ -1.84
Col8a1Q00780 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Col8a1Q00780 Gm42578-201ENSMUST00000199960 194 ntBASIC3.58□□□□□ -1.84
Col8a1Q00780 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC3.58□□□□□ -1.84
Col8a1Q00780 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC3.58□□□□□ -1.84
Col8a1Q00780 Gm45513-201ENSMUST00000210228 376 ntBASIC3.58□□□□□ -1.84
Col8a1Q00780 AC159896.1-201ENSMUST00000215264 215 ntBASIC3.58□□□□□ -1.84
Col8a1Q00780 AC157772.2-201ENSMUST00000228202 259 ntBASIC3.58□□□□□ -1.84
Col8a1Q00780 Gm23736-201ENSMUST00000082553 75 ntBASIC3.58□□□□□ -1.84
Col8a1Q00780 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Col8a1Q00780 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
Col8a1Q00780 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Col8a1Q00780 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Col8a1Q00780 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
Col8a1Q00780 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Col8a1Q00780 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Col8a1Q00780 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Col8a1Q00780 Gm24788-201ENSMUST00000104283 156 ntBASIC3.57□□□□□ -1.84
Col8a1Q00780 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC3.57□□□□□ -1.84
Col8a1Q00780 Gm14803-201ENSMUST00000117163 361 ntBASIC3.57□□□□□ -1.84
Col8a1Q00780 Gm14880-201ENSMUST00000117581 292 ntBASIC3.57□□□□□ -1.84
Col8a1Q00780 Gm13457-201ENSMUST00000117885 267 ntBASIC3.57□□□□□ -1.84
Col8a1Q00780 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
Col8a1Q00780 Gm11448-201ENSMUST00000120427 450 ntBASIC3.57□□□□□ -1.84
Col8a1Q00780 n-R5s192-201ENSMUST00000122577 119 ntBASIC3.57□□□□□ -1.84
Col8a1Q00780 Gm22984-201ENSMUST00000122751 122 ntBASIC3.57□□□□□ -1.84
Col8a1Q00780 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Col8a1Q00780 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC3.57□□□□□ -1.84
Col8a1Q00780 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC3.57□□□□□ -1.84
Col8a1Q00780 Gm22320-201ENSMUST00000157149 312 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 171.1 ms