Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
NcanP55066 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
NcanP55066 Mir5123-201ENSMUST00000177794 83 ntBASIC3.05□□□□□ -1.92
NcanP55066 Gm27161-201ENSMUST00000183960 562 ntBASIC3.05□□□□□ -1.92
NcanP55066 Gm28002-201ENSMUST00000184832 100 ntBASIC3.05□□□□□ -1.92
NcanP55066 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC3.05□□□□□ -1.92
NcanP55066 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC3.05□□□□□ -1.92
NcanP55066 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.05□□□□□ -1.92
NcanP55066 Gm18956-201ENSMUST00000192857 480 ntBASIC3.05□□□□□ -1.92
NcanP55066 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.05□□□□□ -1.92
NcanP55066 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
NcanP55066 Gm5322-201ENSMUST00000206142 699 ntBASIC3.05□□□□□ -1.92
NcanP55066 Gm45232-201ENSMUST00000207811 162 ntBASIC3.05□□□□□ -1.92
NcanP55066 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC3.05□□□□□ -1.92
NcanP55066 AC147101.1-201ENSMUST00000217964 312 ntBASIC3.05□□□□□ -1.92
NcanP55066 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC3.05□□□□□ -1.92
NcanP55066 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC3.05□□□□□ -1.92
NcanP55066 AC102291.2-201ENSMUST00000228083 367 ntBASIC3.05□□□□□ -1.92
NcanP55066 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
NcanP55066 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
NcanP55066 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
NcanP55066 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
NcanP55066 Gm43404-201ENSMUST00000200424 2534 ntBASIC3.05□□□□□ -1.92
NcanP55066 AC117199.1-201ENSMUST00000219940 3132 ntBASIC3.05□□□□□ -1.92
NcanP55066 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
NcanP55066 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
NcanP55066 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
NcanP55066 Gm8935-201ENSMUST00000066794 2798 ntBASIC3.05□□□□□ -1.92
NcanP55066 Gm37387-201ENSMUST00000192201 1806 ntBASIC3.05□□□□□ -1.92
NcanP55066 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
NcanP55066 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
NcanP55066 Gm15975-201ENSMUST00000122385 1402 ntBASIC3.04□□□□□ -1.92
NcanP55066 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
NcanP55066 Gm14594-201ENSMUST00000118052 537 ntBASIC3.04□□□□□ -1.92
NcanP55066 Gm14590-201ENSMUST00000118934 537 ntBASIC3.04□□□□□ -1.92
NcanP55066 Gm6806-201ENSMUST00000120092 1006 ntBASIC3.04□□□□□ -1.92
NcanP55066 Gm12640-201ENSMUST00000120097 310 ntBASIC3.04□□□□□ -1.92
NcanP55066 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC3.04□□□□□ -1.92
NcanP55066 Gm11834-201ENSMUST00000122257 585 ntBASIC3.04□□□□□ -1.92
NcanP55066 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC3.04□□□□□ -1.92
NcanP55066 Gm23325-201ENSMUST00000157422 129 ntBASIC3.04□□□□□ -1.92
NcanP55066 Gm22841-201ENSMUST00000158443 62 ntBASIC3.04□□□□□ -1.92
NcanP55066 Gm17119-201ENSMUST00000163943 280 ntBASIC3.04□□□□□ -1.92
NcanP55066 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC3.04□□□□□ -1.92
NcanP55066 Gm24315-201ENSMUST00000177835 127 ntBASIC3.04□□□□□ -1.92
NcanP55066 Gm14596-201ENSMUST00000180268 537 ntBASIC3.04□□□□□ -1.92
NcanP55066 Gm14595-201ENSMUST00000180335 537 ntBASIC3.04□□□□□ -1.92
NcanP55066 Mir496b-201ENSMUST00000184935 113 ntBASIC3.04□□□□□ -1.92
NcanP55066 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC3.04□□□□□ -1.92
NcanP55066 Gm18296-201ENSMUST00000192475 783 ntBASIC3.04□□□□□ -1.92
NcanP55066 Gm42164-201ENSMUST00000198881 379 ntBASIC3.04□□□□□ -1.92
NcanP55066 Gm42475-201ENSMUST00000201212 295 ntBASIC3.04□□□□□ -1.92
NcanP55066 Gm19244-201ENSMUST00000204340 253 ntBASIC3.04□□□□□ -1.92
NcanP55066 AC134334.1-201ENSMUST00000214277 255 ntBASIC3.04□□□□□ -1.92
NcanP55066 Gm18160-201ENSMUST00000214279 827 ntBASIC3.04□□□□□ -1.92
NcanP55066 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC3.04□□□□□ -1.92
NcanP55066 AC116589.4-201ENSMUST00000222390 216 ntBASIC3.04□□□□□ -1.92
NcanP55066 CT030238.4-201ENSMUST00000228579 801 ntBASIC3.04□□□□□ -1.92
NcanP55066 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
NcanP55066 Mir200b-201ENSMUST00000083615 70 ntBASIC3.04□□□□□ -1.92
NcanP55066 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC3.04□□□□□ -1.92
NcanP55066 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.04□□□□□ -1.92
NcanP55066 AC115047.2-201ENSMUST00000214421 1848 ntBASIC3.04□□□□□ -1.92
NcanP55066 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
NcanP55066 BC022960-201ENSMUST00000119987 1815 ntBASIC3.03□□□□□ -1.92
NcanP55066 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
NcanP55066 Gm24889-201ENSMUST00000104388 132 ntBASIC3.03□□□□□ -1.92
NcanP55066 Gm12433-201ENSMUST00000119659 255 ntBASIC3.03□□□□□ -1.92
NcanP55066 Gm12825-201ENSMUST00000120249 563 ntBASIC3.03□□□□□ -1.92
NcanP55066 Gm23889-201ENSMUST00000122689 104 ntBASIC3.03□□□□□ -1.92
NcanP55066 Gm16355-201ENSMUST00000128606 231 ntBASIC3.03□□□□□ -1.92
NcanP55066 Gm22516-201ENSMUST00000158266 124 ntBASIC3.03□□□□□ -1.92
NcanP55066 Gm24498-201ENSMUST00000158445 102 ntBASIC3.03□□□□□ -1.92
NcanP55066 Mir3964-201ENSMUST00000174898 74 ntBASIC3.03□□□□□ -1.92
NcanP55066 Gm24082-201ENSMUST00000175175 83 ntBASIC3.03□□□□□ -1.92
NcanP55066 Gm4076-201ENSMUST00000179230 965 ntBASIC3.03□□□□□ -1.92
NcanP55066 Gm27236-201ENSMUST00000184147 442 ntBASIC3.03□□□□□ -1.92
NcanP55066 Gm28489-201ENSMUST00000186655 316 ntBASIC3.03□□□□□ -1.92
NcanP55066 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
NcanP55066 Gm37377-201ENSMUST00000191733 304 ntBASIC3.03□□□□□ -1.92
NcanP55066 Gm37550-201ENSMUST00000193230 463 ntBASIC3.03□□□□□ -1.92
NcanP55066 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC3.03□□□□□ -1.92
NcanP55066 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC3.03□□□□□ -1.92
NcanP55066 CT030135.1-201ENSMUST00000223760 570 ntBASIC3.03□□□□□ -1.92
NcanP55066 AC154603.1-201ENSMUST00000224355 313 ntBASIC3.03□□□□□ -1.92
NcanP55066 AC156790.3-201ENSMUST00000226200 254 ntBASIC3.03□□□□□ -1.92
NcanP55066 Gm26108-201ENSMUST00000083973 191 ntBASIC3.03□□□□□ -1.92
NcanP55066 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
NcanP55066 Gm38382-201ENSMUST00000193790 2499 ntBASIC3.03□□□□□ -1.92
NcanP55066 Gm14415-201ENSMUST00000118260 1578 ntBASIC3.03□□□□□ -1.92
NcanP55066 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
NcanP55066 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
NcanP55066 Mir682-201ENSMUST00000102281 96 ntBASIC3.02□□□□□ -1.93
NcanP55066 Mir669l-201ENSMUST00000103771 98 ntBASIC3.02□□□□□ -1.93
NcanP55066 Gm23803-201ENSMUST00000104610 132 ntBASIC3.02□□□□□ -1.93
NcanP55066 Gm25507-201ENSMUST00000116981 144 ntBASIC3.02□□□□□ -1.93
NcanP55066 Gm12878-201ENSMUST00000118744 332 ntBASIC3.02□□□□□ -1.93
NcanP55066 Gm14848-201ENSMUST00000121850 467 ntBASIC3.02□□□□□ -1.93
NcanP55066 Gm23183-201ENSMUST00000122595 323 ntBASIC3.02□□□□□ -1.93
NcanP55066 Gm8338-201ENSMUST00000163928 363 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 100.5 ms