Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm29484-201ENSMUST00000186067 324 ntBASIC4.38□□□□□ -1.71
Sox1P53783 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC4.38□□□□□ -1.71
Sox1P53783 Gm17811-201ENSMUST00000206193 387 ntBASIC4.38□□□□□ -1.71
Sox1P53783 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC4.38□□□□□ -1.71
Sox1P53783 AC153646.2-201ENSMUST00000220516 109 ntBASIC4.38□□□□□ -1.71
Sox1P53783 Gm25818-201ENSMUST00000083282 164 ntBASIC4.38□□□□□ -1.71
Sox1P53783 Gm36944-201ENSMUST00000192257 2759 ntBASIC4.38□□□□□ -1.71
Sox1P53783 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Sox1P53783 AC153964.1-201ENSMUST00000219677 3142 ntBASIC4.38□□□□□ -1.71
Sox1P53783 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC4.38□□□□□ -1.71
Sox1P53783 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Sox1P53783 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC4.38□□□□□ -1.71
Sox1P53783 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Sox1P53783 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
Sox1P53783 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Sox1P53783 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
Sox1P53783 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
Sox1P53783 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Sox1P53783 Gm8935-202ENSMUST00000105727 1959 ntBASIC4.37□□□□□ -1.71
Sox1P53783 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
Sox1P53783 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Sox1P53783 Gm26500-201ENSMUST00000101867 106 ntBASIC4.37□□□□□ -1.71
Sox1P53783 Gm12683-201ENSMUST00000117528 415 ntBASIC4.37□□□□□ -1.71
Sox1P53783 Gm26279-201ENSMUST00000157095 102 ntBASIC4.37□□□□□ -1.71
Sox1P53783 Gm28020-201ENSMUST00000157739 67 ntBASIC4.37□□□□□ -1.71
Sox1P53783 Gm24552-201ENSMUST00000158646 103 ntBASIC4.37□□□□□ -1.71
Sox1P53783 Gm25834-201ENSMUST00000158916 101 ntBASIC4.37□□□□□ -1.71
Sox1P53783 Gm17100-201ENSMUST00000168963 272 ntBASIC4.37□□□□□ -1.71
Sox1P53783 Gm22308-201ENSMUST00000177609 107 ntBASIC4.37□□□□□ -1.71
Sox1P53783 Mir7k-201ENSMUST00000184115 110 ntBASIC4.37□□□□□ -1.71
Sox1P53783 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC4.37□□□□□ -1.71
Sox1P53783 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC4.37□□□□□ -1.71
Sox1P53783 Igkv13-76-201ENSMUST00000197621 347 ntBASIC4.37□□□□□ -1.71
Sox1P53783 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC4.37□□□□□ -1.71
Sox1P53783 Gm44010-201ENSMUST00000204432 331 ntBASIC4.37□□□□□ -1.71
Sox1P53783 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC4.37□□□□□ -1.71
Sox1P53783 AC133598.4-202ENSMUST00000225267 469 ntBASIC4.37□□□□□ -1.71
Sox1P53783 AC154276.2-201ENSMUST00000227707 309 ntBASIC4.37□□□□□ -1.71
Sox1P53783 AC123860.1-201ENSMUST00000228033 481 ntBASIC4.37□□□□□ -1.71
Sox1P53783 Gm23518-201ENSMUST00000082835 153 ntBASIC4.37□□□□□ -1.71
Sox1P53783 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Sox1P53783 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Sox1P53783 Gm44518-201ENSMUST00000208080 4370 ntBASIC4.37□□□□□ -1.71
Sox1P53783 Gm43259-201ENSMUST00000198446 3277 ntBASIC4.37□□□□□ -1.71
Sox1P53783 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Sox1P53783 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Sox1P53783 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
Sox1P53783 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Sox1P53783 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Sox1P53783 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Sox1P53783 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Sox1P53783 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Sox1P53783 Gm22750-201ENSMUST00000102076 103 ntBASIC4.36□□□□□ -1.71
Sox1P53783 Mir465b-1-201ENSMUST00000103940 79 ntBASIC4.36□□□□□ -1.71
Sox1P53783 Gm25915-201ENSMUST00000104265 126 ntBASIC4.36□□□□□ -1.71
Sox1P53783 Mir465b-2-201ENSMUST00000104662 79 ntBASIC4.36□□□□□ -1.71
Sox1P53783 Gm13714-201ENSMUST00000117313 221 ntBASIC4.36□□□□□ -1.71
Sox1P53783 Gm6897-201ENSMUST00000117714 138 ntBASIC4.36□□□□□ -1.71
Sox1P53783 Gm14758-201ENSMUST00000119104 138 ntBASIC4.36□□□□□ -1.71
Sox1P53783 Gm5391-201ENSMUST00000121155 613 ntBASIC4.36□□□□□ -1.71
Sox1P53783 Gm25720-201ENSMUST00000157503 105 ntBASIC4.36□□□□□ -1.71
Sox1P53783 Gm22766-201ENSMUST00000158372 99 ntBASIC4.36□□□□□ -1.71
Sox1P53783 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Sox1P53783 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Sox1P53783 Gm29104-201ENSMUST00000186304 222 ntBASIC4.36□□□□□ -1.71
Sox1P53783 Gm42428-201ENSMUST00000198677 302 ntBASIC4.36□□□□□ -1.71
Sox1P53783 AC155715.1-201ENSMUST00000213575 463 ntBASIC4.36□□□□□ -1.71
Sox1P53783 Gm17829-201ENSMUST00000219782 344 ntBASIC4.36□□□□□ -1.71
Sox1P53783 Mir21a-201ENSMUST00000083521 92 ntBASIC4.36□□□□□ -1.71
Sox1P53783 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Sox1P53783 Gm21032-201ENSMUST00000208108 2578 ntBASIC4.36□□□□□ -1.71
Sox1P53783 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Sox1P53783 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC4.36□□□□□ -1.71
Sox1P53783 Gm43329-201ENSMUST00000200120 3232 ntBASIC4.36□□□□□ -1.71
Sox1P53783 Olfr1016-203ENSMUST00000217410 2738 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
Sox1P53783 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Sox1P53783 Gm42616-201ENSMUST00000198989 4184 ntBASIC4.35□□□□□ -1.71
Sox1P53783 AC165106.3-201ENSMUST00000228191 3843 ntBASIC4.35□□□□□ -1.71
Sox1P53783 Gm38106-201ENSMUST00000194107 2534 ntBASIC4.35□□□□□ -1.71
Sox1P53783 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC4.35□□□□□ -1.71
Sox1P53783 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Sox1P53783 Gm22784-201ENSMUST00000104088 132 ntBASIC4.35□□□□□ -1.71
Sox1P53783 Gm11456-201ENSMUST00000121070 256 ntBASIC4.35□□□□□ -1.71
Sox1P53783 Gm22380-201ENSMUST00000157479 95 ntBASIC4.35□□□□□ -1.71
Sox1P53783 Gm22889-201ENSMUST00000158639 58 ntBASIC4.35□□□□□ -1.71
Sox1P53783 Ear-ps8-201ENSMUST00000161935 354 ntBASIC4.35□□□□□ -1.71
Sox1P53783 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Sox1P53783 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Sox1P53783 Gm20651-201ENSMUST00000177219 329 ntBASIC4.35□□□□□ -1.71
Sox1P53783 Gm27392-201ENSMUST00000185041 101 ntBASIC4.35□□□□□ -1.71
Sox1P53783 Gm45080-201ENSMUST00000206648 283 ntBASIC4.35□□□□□ -1.71
Sox1P53783 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC4.35□□□□□ -1.71
Sox1P53783 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Sox1P53783 n-R5s3-201ENSMUST00000083879 112 ntBASIC4.35□□□□□ -1.71
Sox1P53783 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC4.35□□□□□ -1.71
Sox1P53783 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Sox1P53783 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC4.35□□□□□ -1.71
Sox1P53783 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Sox1P53783 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Sox1P53783 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 90.4 ms