Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
Rfx1P48377 Gm24788-201ENSMUST00000104283 156 ntBASIC4.82□□□□□ -1.64
Rfx1P48377 Gm8666-201ENSMUST00000117517 292 ntBASIC4.82□□□□□ -1.64
Rfx1P48377 Gm15936-201ENSMUST00000118706 460 ntBASIC4.82□□□□□ -1.64
Rfx1P48377 Gm14629-201ENSMUST00000122428 144 ntBASIC4.82□□□□□ -1.64
Rfx1P48377 Gm24630-201ENSMUST00000122768 106 ntBASIC4.82□□□□□ -1.64
Rfx1P48377 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Rfx1P48377 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
Rfx1P48377 Gm27723-201ENSMUST00000157398 63 ntBASIC4.82□□□□□ -1.64
Rfx1P48377 Gm24666-201ENSMUST00000158937 167 ntBASIC4.82□□□□□ -1.64
Rfx1P48377 Mir6938-201ENSMUST00000184173 63 ntBASIC4.82□□□□□ -1.64
Rfx1P48377 Mir6410-201ENSMUST00000184204 104 ntBASIC4.82□□□□□ -1.64
Rfx1P48377 n-TSaga9-201ENSMUST00000197675 107 ntBASIC4.82□□□□□ -1.64
Rfx1P48377 Gm32222-201ENSMUST00000203296 298 ntBASIC4.82□□□□□ -1.64
Rfx1P48377 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Rfx1P48377 AC123803.1-201ENSMUST00000216093 189 ntBASIC4.82□□□□□ -1.64
Rfx1P48377 Gm46997-201ENSMUST00000222108 217 ntBASIC4.82□□□□□ -1.64
Rfx1P48377 Gm10088-201ENSMUST00000074116 423 ntBASIC4.82□□□□□ -1.64
Rfx1P48377 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Rfx1P48377 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Rfx1P48377 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
Rfx1P48377 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Rfx1P48377 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Rfx1P48377 AC124346.2-201ENSMUST00000217986 5083 ntBASIC4.81□□□□□ -1.64
Rfx1P48377 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
Rfx1P48377 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC4.81□□□□□ -1.64
Rfx1P48377 Gm15377-201ENSMUST00000119594 246 ntBASIC4.81□□□□□ -1.64
Rfx1P48377 Gm14593-201ENSMUST00000119948 294 ntBASIC4.81□□□□□ -1.64
Rfx1P48377 Gm22957-201ENSMUST00000122511 123 ntBASIC4.81□□□□□ -1.64
Rfx1P48377 Gm14562-201ENSMUST00000129885 543 ntBASIC4.81□□□□□ -1.64
Rfx1P48377 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Rfx1P48377 Gm24086-201ENSMUST00000175171 98 ntBASIC4.81□□□□□ -1.64
Rfx1P48377 Gm13249-201ENSMUST00000177803 345 ntBASIC4.81□□□□□ -1.64
Rfx1P48377 Gm13144-201ENSMUST00000179385 345 ntBASIC4.81□□□□□ -1.64
Rfx1P48377 Gm27568-201ENSMUST00000184220 99 ntBASIC4.81□□□□□ -1.64
Rfx1P48377 Gm27899-201ENSMUST00000184715 64 ntBASIC4.81□□□□□ -1.64
Rfx1P48377 Gm27308-201ENSMUST00000184807 233 ntBASIC4.81□□□□□ -1.64
Rfx1P48377 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC4.81□□□□□ -1.64
Rfx1P48377 AC165157.3-201ENSMUST00000220815 103 ntBASIC4.81□□□□□ -1.64
Rfx1P48377 AC162934.1-201ENSMUST00000222880 309 ntBASIC4.81□□□□□ -1.64
Rfx1P48377 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC4.81□□□□□ -1.64
Rfx1P48377 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Rfx1P48377 Gm14416-201ENSMUST00000118630 2308 ntBASIC4.81□□□□□ -1.64
Rfx1P48377 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Rfx1P48377 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Rfx1P48377 Gm44434-201ENSMUST00000203918 3745 ntBASIC4.81□□□□□ -1.64
Rfx1P48377 Gm44525-201ENSMUST00000183129 2634 ntBASIC4.8□□□□□ -1.64
Rfx1P48377 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Rfx1P48377 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
Rfx1P48377 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC4.8□□□□□ -1.64
Rfx1P48377 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Rfx1P48377 Gm26367-201ENSMUST00000104165 132 ntBASIC4.8□□□□□ -1.64
Rfx1P48377 Gm22453-201ENSMUST00000122801 318 ntBASIC4.8□□□□□ -1.64
Rfx1P48377 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC4.8□□□□□ -1.64
Rfx1P48377 Gm23960-201ENSMUST00000157206 131 ntBASIC4.8□□□□□ -1.64
Rfx1P48377 Gm24348-201ENSMUST00000158710 130 ntBASIC4.8□□□□□ -1.64
Rfx1P48377 Gm23196-201ENSMUST00000158806 107 ntBASIC4.8□□□□□ -1.64
Rfx1P48377 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC4.8□□□□□ -1.64
Rfx1P48377 Gm27875-201ENSMUST00000184425 123 ntBASIC4.8□□□□□ -1.64
Rfx1P48377 Gm27286-201ENSMUST00000184934 179 ntBASIC4.8□□□□□ -1.64
Rfx1P48377 Gm29428-201ENSMUST00000190086 409 ntBASIC4.8□□□□□ -1.64
Rfx1P48377 Gm44376-201ENSMUST00000197570 128 ntBASIC4.8□□□□□ -1.64
Rfx1P48377 Gm42672-201ENSMUST00000197821 352 ntBASIC4.8□□□□□ -1.64
Rfx1P48377 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC4.8□□□□□ -1.64
Rfx1P48377 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC4.8□□□□□ -1.64
Rfx1P48377 Gm26449-201ENSMUST00000082452 104 ntBASIC4.8□□□□□ -1.64
Rfx1P48377 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
Rfx1P48377 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Rfx1P48377 Gm37498-201ENSMUST00000193524 4002 ntBASIC4.8□□□□□ -1.64
Rfx1P48377 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Rfx1P48377 AC154481.2-201ENSMUST00000222526 3175 ntBASIC4.79□□□□□ -1.64
Rfx1P48377 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Rfx1P48377 Gm7853-201ENSMUST00000100708 478 ntBASIC4.79□□□□□ -1.64
Rfx1P48377 Gm24125-201ENSMUST00000104105 137 ntBASIC4.79□□□□□ -1.64
Rfx1P48377 Gm12328-201ENSMUST00000118611 197 ntBASIC4.79□□□□□ -1.64
Rfx1P48377 Gm13424-201ENSMUST00000122301 354 ntBASIC4.79□□□□□ -1.64
Rfx1P48377 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC4.79□□□□□ -1.64
Rfx1P48377 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Rfx1P48377 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC4.79□□□□□ -1.64
Rfx1P48377 Mir7661-201ENSMUST00000197023 61 ntBASIC4.79□□□□□ -1.64
Rfx1P48377 Gm44520-201ENSMUST00000205447 802 ntBASIC4.79□□□□□ -1.64
Rfx1P48377 AC158955.1-201ENSMUST00000227140 385 ntBASIC4.79□□□□□ -1.64
Rfx1P48377 Gm24316-201ENSMUST00000083041 107 ntBASIC4.79□□□□□ -1.64
Rfx1P48377 Gm26166-201ENSMUST00000083788 107 ntBASIC4.79□□□□□ -1.64
Rfx1P48377 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Rfx1P48377 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Rfx1P48377 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Rfx1P48377 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Rfx1P48377 Gm37941-201ENSMUST00000192170 2309 ntBASIC4.79□□□□□ -1.64
Rfx1P48377 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Rfx1P48377 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Rfx1P48377 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Rfx1P48377 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Rfx1P48377 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Rfx1P48377 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Rfx1P48377 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Rfx1P48377 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Rfx1P48377 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Rfx1P48377 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Rfx1P48377 Gm23753-201ENSMUST00000157575 149 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 112.6 ms