Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Snord93-201ENSMUST00000175580 71 ntBASIC3.19□□□□□ -1.9
Traf1P39428 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC3.19□□□□□ -1.9
Traf1P39428 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC3.19□□□□□ -1.9
Traf1P39428 Gm6060-201ENSMUST00000188671 251 ntBASIC3.19□□□□□ -1.9
Traf1P39428 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC3.19□□□□□ -1.9
Traf1P39428 AC112935.1-201ENSMUST00000227603 250 ntBASIC3.19□□□□□ -1.9
Traf1P39428 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Traf1P39428 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Traf1P39428 Olfr895-201ENSMUST00000093864 951 ntBASIC3.19□□□□□ -1.9
Traf1P39428 Gm26384-201ENSMUST00000102183 110 ntBASIC3.18□□□□□ -1.9
Traf1P39428 Gm24068-201ENSMUST00000104513 132 ntBASIC3.18□□□□□ -1.9
Traf1P39428 Gm14775-201ENSMUST00000122089 310 ntBASIC3.18□□□□□ -1.9
Traf1P39428 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC3.18□□□□□ -1.9
Traf1P39428 Gm25220-201ENSMUST00000157546 95 ntBASIC3.18□□□□□ -1.9
Traf1P39428 Gm22098-201ENSMUST00000157930 85 ntBASIC3.18□□□□□ -1.9
Traf1P39428 Gm24736-201ENSMUST00000158862 130 ntBASIC3.18□□□□□ -1.9
Traf1P39428 Gm25670-201ENSMUST00000178423 107 ntBASIC3.18□□□□□ -1.9
Traf1P39428 Gm26239-201ENSMUST00000178842 107 ntBASIC3.18□□□□□ -1.9
Traf1P39428 Gm25361-201ENSMUST00000179358 76 ntBASIC3.18□□□□□ -1.9
Traf1P39428 Gm24267-201ENSMUST00000179841 107 ntBASIC3.18□□□□□ -1.9
Traf1P39428 Gm37757-201ENSMUST00000193072 210 ntBASIC3.18□□□□□ -1.9
Traf1P39428 Gm17771-201ENSMUST00000194477 1147 ntBASIC3.18□□□□□ -1.9
Traf1P39428 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Traf1P39428 Gm45452-201ENSMUST00000210905 177 ntBASIC3.18□□□□□ -1.9
Traf1P39428 Gm19326-201ENSMUST00000219818 326 ntBASIC3.18□□□□□ -1.9
Traf1P39428 Gm26458-201ENSMUST00000082832 128 ntBASIC3.18□□□□□ -1.9
Traf1P39428 Gm24292-201ENSMUST00000082888 107 ntBASIC3.18□□□□□ -1.9
Traf1P39428 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Traf1P39428 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
Traf1P39428 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Traf1P39428 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Traf1P39428 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Traf1P39428 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Traf1P39428 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Traf1P39428 Snord14c-201ENSMUST00000101927 86 ntBASIC3.17□□□□□ -1.9
Traf1P39428 Mir1195-201ENSMUST00000116818 98 ntBASIC3.17□□□□□ -1.9
Traf1P39428 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Traf1P39428 Gm14943-201ENSMUST00000118056 546 ntBASIC3.17□□□□□ -1.9
Traf1P39428 Gm14940-201ENSMUST00000119309 495 ntBASIC3.17□□□□□ -1.9
Traf1P39428 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC3.17□□□□□ -1.9
Traf1P39428 Gm13341-201ENSMUST00000120780 672 ntBASIC3.17□□□□□ -1.9
Traf1P39428 Gm16428-201ENSMUST00000121193 723 ntBASIC3.17□□□□□ -1.9
Traf1P39428 Gm23559-201ENSMUST00000157824 103 ntBASIC3.17□□□□□ -1.9
Traf1P39428 Gm22733-201ENSMUST00000158094 91 ntBASIC3.17□□□□□ -1.9
Traf1P39428 Gm22611-201ENSMUST00000158288 150 ntBASIC3.17□□□□□ -1.9
Traf1P39428 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Traf1P39428 Gm20656-201ENSMUST00000176925 518 ntBASIC3.17□□□□□ -1.9
Traf1P39428 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC3.17□□□□□ -1.9
Traf1P39428 Gm24306-201ENSMUST00000180229 79 ntBASIC3.17□□□□□ -1.9
Traf1P39428 Mir6353-201ENSMUST00000183596 113 ntBASIC3.17□□□□□ -1.9
Traf1P39428 Gm29216-201ENSMUST00000187117 492 ntBASIC3.17□□□□□ -1.9
Traf1P39428 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC3.17□□□□□ -1.9
Traf1P39428 Gm38333-201ENSMUST00000193608 604 ntBASIC3.17□□□□□ -1.9
Traf1P39428 Gm18341-201ENSMUST00000197538 622 ntBASIC3.17□□□□□ -1.9
Traf1P39428 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Traf1P39428 Gm42475-201ENSMUST00000201212 295 ntBASIC3.17□□□□□ -1.9
Traf1P39428 Gm19252-201ENSMUST00000204705 305 ntBASIC3.17□□□□□ -1.9
Traf1P39428 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC3.17□□□□□ -1.9
Traf1P39428 AC105958.2-201ENSMUST00000214167 191 ntBASIC3.17□□□□□ -1.9
Traf1P39428 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC3.17□□□□□ -1.9
Traf1P39428 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC3.17□□□□□ -1.9
Traf1P39428 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC3.16□□□□□ -1.9
Traf1P39428 Gm37236-201ENSMUST00000193670 3249 ntBASIC3.16□□□□□ -1.9
Traf1P39428 n-R5s26-201ENSMUST00000104601 122 ntBASIC3.16□□□□□ -1.9
Traf1P39428 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC3.16□□□□□ -1.9
Traf1P39428 Gm15167-201ENSMUST00000121997 187 ntBASIC3.16□□□□□ -1.9
Traf1P39428 Gm23885-201ENSMUST00000122682 294 ntBASIC3.16□□□□□ -1.9
Traf1P39428 Gm23206-201ENSMUST00000122720 184 ntBASIC3.16□□□□□ -1.9
Traf1P39428 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Traf1P39428 Gm23895-201ENSMUST00000158108 160 ntBASIC3.16□□□□□ -1.9
Traf1P39428 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Traf1P39428 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC3.16□□□□□ -1.9
Traf1P39428 Gm6801-201ENSMUST00000190697 339 ntBASIC3.16□□□□□ -1.9
Traf1P39428 Gm37866-201ENSMUST00000191950 696 ntBASIC3.16□□□□□ -1.9
Traf1P39428 Gm7871-201ENSMUST00000195346 618 ntBASIC3.16□□□□□ -1.9
Traf1P39428 Gm43901-201ENSMUST00000203247 453 ntBASIC3.16□□□□□ -1.9
Traf1P39428 Gm45344-201ENSMUST00000211610 341 ntBASIC3.16□□□□□ -1.9
Traf1P39428 Gm45772-201ENSMUST00000212961 240 ntBASIC3.16□□□□□ -1.9
Traf1P39428 Gm3442-201ENSMUST00000216808 710 ntBASIC3.16□□□□□ -1.9
Traf1P39428 Gm17890-201ENSMUST00000221419 757 ntBASIC3.16□□□□□ -1.9
Traf1P39428 AC157654.1-201ENSMUST00000224130 820 ntBASIC3.16□□□□□ -1.9
Traf1P39428 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Traf1P39428 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Traf1P39428 Gm4945-201ENSMUST00000075152 453 ntBASIC3.16□□□□□ -1.9
Traf1P39428 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Traf1P39428 Gm22508-201ENSMUST00000082772 110 ntBASIC3.16□□□□□ -1.9
Traf1P39428 Gm24948-201ENSMUST00000082866 207 ntBASIC3.16□□□□□ -1.9
Traf1P39428 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Traf1P39428 Gm45104-201ENSMUST00000208748 4350 ntBASIC3.16□□□□□ -1.9
Traf1P39428 Gm38706-201ENSMUST00000182397 2617 ntBASIC3.15□□□□□ -1.9
Traf1P39428 Gm22496-201ENSMUST00000104493 88 ntBASIC3.15□□□□□ -1.91
Traf1P39428 Mir1192-201ENSMUST00000116976 121 ntBASIC3.15□□□□□ -1.91
Traf1P39428 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC3.15□□□□□ -1.91
Traf1P39428 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC3.15□□□□□ -1.91
Traf1P39428 Gm17065-201ENSMUST00000165245 239 ntBASIC3.15□□□□□ -1.91
Traf1P39428 Gm3104-201ENSMUST00000171004 473 ntBASIC3.15□□□□□ -1.91
Traf1P39428 Gm25175-201ENSMUST00000178712 79 ntBASIC3.15□□□□□ -1.91
Traf1P39428 Gm27786-201ENSMUST00000184337 70 ntBASIC3.15□□□□□ -1.91
Traf1P39428 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
Traf1P39428 Gm37029-201ENSMUST00000195773 239 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms