Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Col2a1P28481 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Col2a1P28481 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Col2a1P28481 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Col2a1P28481 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Col2a1P28481 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Col2a1P28481 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Col2a1P28481 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Col2a1P28481 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Col2a1P28481 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Col2a1P28481 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Col2a1P28481 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Col2a1P28481 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Col2a1P28481 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Col2a1P28481 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Col2a1P28481 Gm28474-201ENSMUST00000188501 315 ntBASIC2.35□□□□□ -2.03
Col2a1P28481 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Col2a1P28481 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Col2a1P28481 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Col2a1P28481 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Col2a1P28481 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Col2a1P28481 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Col2a1P28481 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Col2a1P28481 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Col2a1P28481 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Col2a1P28481 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Col2a1P28481 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Col2a1P28481 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Col2a1P28481 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Col2a1P28481 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Col2a1P28481 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Col2a1P28481 Gm29573-201ENSMUST00000190291 919 ntBASIC2.35□□□□□ -2.03
Col2a1P28481 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
Col2a1P28481 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Col2a1P28481 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Col2a1P28481 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Col2a1P28481 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Col2a1P28481 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Col2a1P28481 Gm31123-201ENSMUST00000192094 666 ntBASIC2.35□□□□□ -2.03
Col2a1P28481 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Col2a1P28481 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Col2a1P28481 AL928567.1-201ENSMUST00000197891 138 ntBASIC2.35□□□□□ -2.03
Col2a1P28481 Gm7675-201ENSMUST00000208828 686 ntBASIC2.35□□□□□ -2.03
Col2a1P28481 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC2.35□□□□□ -2.03
Col2a1P28481 Gm46146-201ENSMUST00000217483 346 ntBASIC2.35□□□□□ -2.03
Col2a1P28481 Gm5175-202ENSMUST00000219699 529 ntBASIC2.35□□□□□ -2.03
Col2a1P28481 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Col2a1P28481 AC192334.2-201ENSMUST00000223087 1091 ntBASIC2.35□□□□□ -2.03
Col2a1P28481 AC239878.2-201ENSMUST00000224048 464 ntBASIC2.35□□□□□ -2.03
Col2a1P28481 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.35□□□□□ -2.03
Col2a1P28481 Snora69-201ENSMUST00000083708 131 ntBASIC2.35□□□□□ -2.03
Col2a1P28481 Gm45130-201ENSMUST00000207574 3388 ntBASIC2.34□□□□□ -2.03
Col2a1P28481 Gm44438-201ENSMUST00000204388 3236 ntBASIC2.34□□□□□ -2.03
Col2a1P28481 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Col2a1P28481 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Col2a1P28481 Gm26384-201ENSMUST00000102183 110 ntBASIC2.34□□□□□ -2.03
Col2a1P28481 Gm22771-201ENSMUST00000104449 91 ntBASIC2.34□□□□□ -2.03
Col2a1P28481 Gm14887-201ENSMUST00000119522 663 ntBASIC2.34□□□□□ -2.03
Col2a1P28481 Gm14815-201ENSMUST00000120060 488 ntBASIC2.34□□□□□ -2.03
Col2a1P28481 Gm14785-201ENSMUST00000120185 539 ntBASIC2.34□□□□□ -2.03
Col2a1P28481 Gm11404-201ENSMUST00000120872 494 ntBASIC2.34□□□□□ -2.03
Col2a1P28481 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC2.34□□□□□ -2.03
Col2a1P28481 Gm22236-201ENSMUST00000157093 106 ntBASIC2.34□□□□□ -2.03
Col2a1P28481 Gm22765-201ENSMUST00000158371 128 ntBASIC2.34□□□□□ -2.03
Col2a1P28481 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC2.34□□□□□ -2.03
Col2a1P28481 Gm23568-201ENSMUST00000177960 92 ntBASIC2.34□□□□□ -2.03
Col2a1P28481 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
Col2a1P28481 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Col2a1P28481 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
Col2a1P28481 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Col2a1P28481 Gm24829-201ENSMUST00000179245 92 ntBASIC2.34□□□□□ -2.03
Col2a1P28481 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Col2a1P28481 Gm24638-201ENSMUST00000179807 132 ntBASIC2.34□□□□□ -2.03
Col2a1P28481 Gm22307-201ENSMUST00000180019 107 ntBASIC2.34□□□□□ -2.03
Col2a1P28481 Gm27753-201ENSMUST00000184742 203 ntBASIC2.34□□□□□ -2.03
Col2a1P28481 Gm27733-201ENSMUST00000184803 68 ntBASIC2.34□□□□□ -2.03
Col2a1P28481 Gm20811-201ENSMUST00000190500 553 ntBASIC2.34□□□□□ -2.03
Col2a1P28481 Trbv12-3-201ENSMUST00000192675 372 ntBASIC2.34□□□□□ -2.03
Col2a1P28481 Gm44490-201ENSMUST00000198566 127 ntBASIC2.34□□□□□ -2.03
Col2a1P28481 Gm43171-201ENSMUST00000199882 291 ntBASIC2.34□□□□□ -2.03
Col2a1P28481 Gm29754-201ENSMUST00000206269 358 ntBASIC2.34□□□□□ -2.03
Col2a1P28481 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Col2a1P28481 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC2.34□□□□□ -2.03
Col2a1P28481 AC144671.1-201ENSMUST00000215265 99 ntBASIC2.34□□□□□ -2.03
Col2a1P28481 AC159380.1-201ENSMUST00000218096 121 ntBASIC2.34□□□□□ -2.03
Col2a1P28481 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC2.34□□□□□ -2.03
Col2a1P28481 AC125523.1-201ENSMUST00000228018 934 ntBASIC2.34□□□□□ -2.03
Col2a1P28481 Gm6462-201ENSMUST00000081488 304 ntBASIC2.34□□□□□ -2.03
Col2a1P28481 Gm22245-201ENSMUST00000082479 103 ntBASIC2.34□□□□□ -2.03
Col2a1P28481 Gm26922-201ENSMUST00000082687 72 ntBASIC2.34□□□□□ -2.03
Col2a1P28481 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Col2a1P28481 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Col2a1P28481 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
Col2a1P28481 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
Col2a1P28481 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Col2a1P28481 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
Col2a1P28481 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
Col2a1P28481 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Col2a1P28481 Gm22713-201ENSMUST00000116895 130 ntBASIC2.33□□□□□ -2.04
Col2a1P28481 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 99 ms