Protein–RNA interactions for Protein: P28357

Hoxd9, Homeobox protein Hox-D9, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd9P28357 Gm12466-201ENSMUST00000121199 620 ntBASIC4.32□□□□□ -1.72
Hoxd9P28357 Gm13232-201ENSMUST00000121816 632 ntBASIC4.32□□□□□ -1.72
Hoxd9P28357 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC4.32□□□□□ -1.72
Hoxd9P28357 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC4.32□□□□□ -1.72
Hoxd9P28357 Gm16354-201ENSMUST00000155376 150 ntBASIC4.32□□□□□ -1.72
Hoxd9P28357 Gm22943-201ENSMUST00000158564 76 ntBASIC4.32□□□□□ -1.72
Hoxd9P28357 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC4.32□□□□□ -1.72
Hoxd9P28357 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC4.32□□□□□ -1.72
Hoxd9P28357 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Hoxd9P28357 Gm23677-201ENSMUST00000083156 104 ntBASIC4.32□□□□□ -1.72
Hoxd9P28357 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC4.32□□□□□ -1.72
Hoxd9P28357 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Hoxd9P28357 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
Hoxd9P28357 Gm42842-201ENSMUST00000197736 3004 ntBASIC4.32□□□□□ -1.72
Hoxd9P28357 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Hoxd9P28357 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Hoxd9P28357 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Hoxd9P28357 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
Hoxd9P28357 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Hoxd9P28357 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Hoxd9P28357 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Hoxd9P28357 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC4.31□□□□□ -1.72
Hoxd9P28357 Gm22514-201ENSMUST00000122547 308 ntBASIC4.31□□□□□ -1.72
Hoxd9P28357 Gm23184-201ENSMUST00000122594 131 ntBASIC4.31□□□□□ -1.72
Hoxd9P28357 Gm26085-201ENSMUST00000157900 116 ntBASIC4.31□□□□□ -1.72
Hoxd9P28357 Gm24666-201ENSMUST00000158937 167 ntBASIC4.31□□□□□ -1.72
Hoxd9P28357 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC4.31□□□□□ -1.72
Hoxd9P28357 Mir3104-201ENSMUST00000174911 63 ntBASIC4.31□□□□□ -1.72
Hoxd9P28357 Gm24799-201ENSMUST00000178431 79 ntBASIC4.31□□□□□ -1.72
Hoxd9P28357 Gm21850-201ENSMUST00000179792 359 ntBASIC4.31□□□□□ -1.72
Hoxd9P28357 Mir6372-201ENSMUST00000185114 109 ntBASIC4.31□□□□□ -1.72
Hoxd9P28357 Gm37167-201ENSMUST00000194946 396 ntBASIC4.31□□□□□ -1.72
Hoxd9P28357 Gm43602-201ENSMUST00000196772 300 ntBASIC4.31□□□□□ -1.72
Hoxd9P28357 Gm18617-201ENSMUST00000222311 259 ntBASIC4.31□□□□□ -1.72
Hoxd9P28357 AC133598.4-202ENSMUST00000225267 469 ntBASIC4.31□□□□□ -1.72
Hoxd9P28357 AC158955.1-201ENSMUST00000227140 385 ntBASIC4.31□□□□□ -1.72
Hoxd9P28357 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Hoxd9P28357 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Hoxd9P28357 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Hoxd9P28357 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC4.31□□□□□ -1.72
Hoxd9P28357 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Hoxd9P28357 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC4.31□□□□□ -1.72
Hoxd9P28357 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Hoxd9P28357 Gm43260-201ENSMUST00000197378 2430 ntBASIC4.31□□□□□ -1.72
Hoxd9P28357 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Hoxd9P28357 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC4.31□□□□□ -1.72
Hoxd9P28357 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Hoxd9P28357 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Hoxd9P28357 Gm13477-201ENSMUST00000121620 2687 ntBASIC4.3□□□□□ -1.72
Hoxd9P28357 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
Hoxd9P28357 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Hoxd9P28357 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Hoxd9P28357 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC4.3□□□□□ -1.72
Hoxd9P28357 Gm3972-201ENSMUST00000173960 2861 ntBASIC4.3□□□□□ -1.72
Hoxd9P28357 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Hoxd9P28357 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
Hoxd9P28357 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Hoxd9P28357 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hoxd9P28357 Gm22498-201ENSMUST00000104497 86 ntBASIC4.3□□□□□ -1.72
Hoxd9P28357 Gm10552-201ENSMUST00000113396 372 ntBASIC4.3□□□□□ -1.72
Hoxd9P28357 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC4.3□□□□□ -1.72
Hoxd9P28357 Gm12379-201ENSMUST00000119607 391 ntBASIC4.3□□□□□ -1.72
Hoxd9P28357 Gm24839-201ENSMUST00000122602 107 ntBASIC4.3□□□□□ -1.72
Hoxd9P28357 Gm23906-201ENSMUST00000157573 128 ntBASIC4.3□□□□□ -1.72
Hoxd9P28357 Gm24084-201ENSMUST00000175173 137 ntBASIC4.3□□□□□ -1.72
Hoxd9P28357 Gm27568-201ENSMUST00000184220 99 ntBASIC4.3□□□□□ -1.72
Hoxd9P28357 Gm8069-201ENSMUST00000197887 154 ntBASIC4.3□□□□□ -1.72
Hoxd9P28357 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC4.3□□□□□ -1.72
Hoxd9P28357 Gm43746-201ENSMUST00000200028 317 ntBASIC4.3□□□□□ -1.72
Hoxd9P28357 Gm45860-201ENSMUST00000212700 334 ntBASIC4.3□□□□□ -1.72
Hoxd9P28357 AC134254.5-201ENSMUST00000223436 400 ntBASIC4.3□□□□□ -1.72
Hoxd9P28357 AC159252.1-201ENSMUST00000224450 553 ntBASIC4.3□□□□□ -1.72
Hoxd9P28357 Gm8508-201ENSMUST00000061226 363 ntBASIC4.3□□□□□ -1.72
Hoxd9P28357 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC4.3□□□□□ -1.72
Hoxd9P28357 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hoxd9P28357 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Hoxd9P28357 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hoxd9P28357 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Hoxd9P28357 AC144772.3-201ENSMUST00000228829 3126 ntBASIC4.3□□□□□ -1.72
Hoxd9P28357 AC149588.1-201ENSMUST00000228274 3745 ntBASIC4.3□□□□□ -1.72
Hoxd9P28357 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Hoxd9P28357 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Hoxd9P28357 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Hoxd9P28357 Gm36931-201ENSMUST00000192997 4801 ntBASIC4.29□□□□□ -1.72
Hoxd9P28357 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
Hoxd9P28357 Gm24469-201ENSMUST00000104487 131 ntBASIC4.29□□□□□ -1.72
Hoxd9P28357 Gm15752-201ENSMUST00000117427 394 ntBASIC4.29□□□□□ -1.72
Hoxd9P28357 Gm13873-201ENSMUST00000119208 427 ntBASIC4.29□□□□□ -1.72
Hoxd9P28357 Gm15760-201ENSMUST00000119553 283 ntBASIC4.29□□□□□ -1.72
Hoxd9P28357 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC4.29□□□□□ -1.72
Hoxd9P28357 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC4.29□□□□□ -1.72
Hoxd9P28357 Gm25427-201ENSMUST00000157605 103 ntBASIC4.29□□□□□ -1.72
Hoxd9P28357 Gm26373-201ENSMUST00000157833 103 ntBASIC4.29□□□□□ -1.72
Hoxd9P28357 Gm25224-201ENSMUST00000158195 68 ntBASIC4.29□□□□□ -1.72
Hoxd9P28357 Mir1947-201ENSMUST00000158235 85 ntBASIC4.29□□□□□ -1.72
Hoxd9P28357 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Hoxd9P28357 Mir6335-201ENSMUST00000184081 98 ntBASIC4.29□□□□□ -1.72
Hoxd9P28357 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC4.29□□□□□ -1.72
Hoxd9P28357 Gm19244-201ENSMUST00000204340 253 ntBASIC4.29□□□□□ -1.72
Hoxd9P28357 AC123803.1-201ENSMUST00000216093 189 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms