Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Gm28000-201ENSMUST00000184380 85 ntBASIC2.55□□□□□ -2
TP20293 Gm27249-201ENSMUST00000185049 328 ntBASIC2.55□□□□□ -2
TP20293 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC2.55□□□□□ -2
TP20293 Gm37455-201ENSMUST00000191993 529 ntBASIC2.55□□□□□ -2
TP20293 Gm37941-201ENSMUST00000192170 2309 ntBASIC2.55□□□□□ -2
TP20293 Gm38146-201ENSMUST00000194121 1293 ntBASIC2.55□□□□□ -2
TP20293 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC2.55□□□□□ -2
TP20293 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC2.55□□□□□ -2
TP20293 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC2.55□□□□□ -2
TP20293 Gm43232-201ENSMUST00000201346 364 ntBASIC2.55□□□□□ -2
TP20293 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC2.55□□□□□ -2
TP20293 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC2.55□□□□□ -2
TP20293 CT030704.1-201ENSMUST00000227521 699 ntBASIC2.55□□□□□ -2
TP20293 AC137902.2-201ENSMUST00000227989 576 ntBASIC2.55□□□□□ -2
TP20293 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
TP20293 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC2.55□□□□□ -2
TP20293 Gm6030-201ENSMUST00000078768 402 ntBASIC2.55□□□□□ -2
TP20293 Gm10343-201ENSMUST00000096279 348 ntBASIC2.55□□□□□ -2
TP20293 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.55□□□□□ -2
TP20293 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC2.54□□□□□ -2
TP20293 Gm45872-201ENSMUST00000209804 1584 ntBASIC2.54□□□□□ -2
TP20293 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
TP20293 Gm22486-201ENSMUST00000116815 137 ntBASIC2.54□□□□□ -2
TP20293 Gm13356-201ENSMUST00000121678 335 ntBASIC2.54□□□□□ -2
TP20293 Gm23599-201ENSMUST00000157261 251 ntBASIC2.54□□□□□ -2
TP20293 Gm25280-201ENSMUST00000157269 101 ntBASIC2.54□□□□□ -2
TP20293 Gm24910-201ENSMUST00000157289 272 ntBASIC2.54□□□□□ -2
TP20293 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC2.54□□□□□ -2
TP20293 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC2.54□□□□□ -2
TP20293 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC2.54□□□□□ -2
TP20293 Gm22290-201ENSMUST00000177655 107 ntBASIC2.54□□□□□ -2
TP20293 Gm22584-201ENSMUST00000177935 92 ntBASIC2.54□□□□□ -2
TP20293 Gm22583-201ENSMUST00000178031 107 ntBASIC2.54□□□□□ -2
TP20293 Zfp950-206ENSMUST00000178819 171 ntBASIC2.54□□□□□ -2
TP20293 Gm25361-201ENSMUST00000179358 76 ntBASIC2.54□□□□□ -2
TP20293 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC2.54□□□□□ -2
TP20293 Gm43286-201ENSMUST00000197420 424 ntBASIC2.54□□□□□ -2
TP20293 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.54□□□□□ -2
TP20293 Gm19140-201ENSMUST00000209790 421 ntBASIC2.54□□□□□ -2
TP20293 AC156795.1-201ENSMUST00000214655 414 ntBASIC2.54□□□□□ -2
TP20293 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC2.54□□□□□ -2
TP20293 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC2.54□□□□□ -2
TP20293 CT030187.1-201ENSMUST00000220605 252 ntBASIC2.54□□□□□ -2
TP20293 AC112935.1-201ENSMUST00000227603 250 ntBASIC2.54□□□□□ -2
TP20293 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
TP20293 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
TP20293 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.53□□□□□ -2
TP20293 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
TP20293 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
TP20293 Gm650-201ENSMUST00000144428 1551 ntBASIC2.53□□□□□ -2
TP20293 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
TP20293 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
TP20293 Gm25500-201ENSMUST00000104426 123 ntBASIC2.53□□□□□ -2
TP20293 Gm11065-201ENSMUST00000111462 228 ntBASIC2.53□□□□□ -2
TP20293 Gm14835-201ENSMUST00000119039 315 ntBASIC2.53□□□□□ -2
TP20293 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC2.53□□□□□ -2
TP20293 Gm25624-201ENSMUST00000157222 275 ntBASIC2.53□□□□□ -2
TP20293 Gm26414-201ENSMUST00000157674 269 ntBASIC2.53□□□□□ -2
TP20293 Gm22330-201ENSMUST00000158068 115 ntBASIC2.53□□□□□ -2
TP20293 Gm26173-201ENSMUST00000158416 136 ntBASIC2.53□□□□□ -2
TP20293 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC2.53□□□□□ -2
TP20293 Gm17062-201ENSMUST00000166987 461 ntBASIC2.53□□□□□ -2
TP20293 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC2.53□□□□□ -2
TP20293 Snord53-201ENSMUST00000175146 78 ntBASIC2.53□□□□□ -2
TP20293 Mir3965-201ENSMUST00000175570 69 ntBASIC2.53□□□□□ -2
TP20293 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC2.53□□□□□ -2
TP20293 Gm23145-201ENSMUST00000178912 79 ntBASIC2.53□□□□□ -2
TP20293 Snord116l14-201ENSMUST00000179875 94 ntBASIC2.53□□□□□ -2
TP20293 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.53□□□□□ -2
TP20293 Mir6353-201ENSMUST00000183596 113 ntBASIC2.53□□□□□ -2
TP20293 Mir7667-201ENSMUST00000183866 63 ntBASIC2.53□□□□□ -2
TP20293 Gm27761-201ENSMUST00000184091 131 ntBASIC2.53□□□□□ -2
TP20293 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
TP20293 Gm29216-201ENSMUST00000187117 492 ntBASIC2.53□□□□□ -2
TP20293 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC2.53□□□□□ -2
TP20293 Gm45232-201ENSMUST00000207811 162 ntBASIC2.53□□□□□ -2
TP20293 AC150314.1-201ENSMUST00000214798 238 ntBASIC2.53□□□□□ -2
TP20293 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.53□□□□□ -2
TP20293 AC129541.1-201ENSMUST00000226940 523 ntBASIC2.53□□□□□ -2
TP20293 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
TP20293 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC2.53□□□□□ -2
TP20293 Mir125b-2-201ENSMUST00000083538 71 ntBASIC2.53□□□□□ -2
TP20293 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
TP20293 Gm17969-201ENSMUST00000185706 2557 ntBASIC2.53□□□□□ -2.01
TP20293 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
TP20293 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
TP20293 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC2.52□□□□□ -2.01
TP20293 Gm22151-201ENSMUST00000116963 58 ntBASIC2.52□□□□□ -2.01
TP20293 Gm24517-201ENSMUST00000122560 107 ntBASIC2.52□□□□□ -2.01
TP20293 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.52□□□□□ -2.01
TP20293 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC2.52□□□□□ -2.01
TP20293 Gm26105-201ENSMUST00000157253 190 ntBASIC2.52□□□□□ -2.01
TP20293 Gm23268-201ENSMUST00000175494 78 ntBASIC2.52□□□□□ -2.01
TP20293 Gm24019-201ENSMUST00000178620 107 ntBASIC2.52□□□□□ -2.01
TP20293 Gm26243-201ENSMUST00000179260 107 ntBASIC2.52□□□□□ -2.01
TP20293 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC2.52□□□□□ -2.01
TP20293 Gm37946-201ENSMUST00000192064 347 ntBASIC2.52□□□□□ -2.01
TP20293 Trbv6-201ENSMUST00000193743 276 ntBASIC2.52□□□□□ -2.01
TP20293 Trbv24-201ENSMUST00000194614 347 ntBASIC2.52□□□□□ -2.01
TP20293 Gm43804-201ENSMUST00000198280 456 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms