Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm25628-201ENSMUST00000084002 105 ntBASIC2.02□□□□□ -2.09
Sdc1P18828 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC2.02□□□□□ -2.09
Sdc1P18828 Gm37761-201ENSMUST00000194989 2098 ntBASIC2.02□□□□□ -2.09
Sdc1P18828 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.01□□□□□ -2.09
Sdc1P18828 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Sdc1P18828 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Sdc1P18828 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC2.01□□□□□ -2.09
Sdc1P18828 Gm22779-201ENSMUST00000104085 107 ntBASIC2.01□□□□□ -2.09
Sdc1P18828 Gm11065-201ENSMUST00000111462 228 ntBASIC2.01□□□□□ -2.09
Sdc1P18828 Gm13331-201ENSMUST00000117500 448 ntBASIC2.01□□□□□ -2.09
Sdc1P18828 Gm15167-201ENSMUST00000121997 187 ntBASIC2.01□□□□□ -2.09
Sdc1P18828 n-R5s179-201ENSMUST00000122564 118 ntBASIC2.01□□□□□ -2.09
Sdc1P18828 Gm26280-201ENSMUST00000157096 101 ntBASIC2.01□□□□□ -2.09
Sdc1P18828 Gm22083-201ENSMUST00000157586 102 ntBASIC2.01□□□□□ -2.09
Sdc1P18828 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Sdc1P18828 Gm17064-201ENSMUST00000167690 452 ntBASIC2.01□□□□□ -2.09
Sdc1P18828 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC2.01□□□□□ -2.09
Sdc1P18828 Gm29429-201ENSMUST00000187071 121 ntBASIC2.01□□□□□ -2.09
Sdc1P18828 Gm38154-201ENSMUST00000195444 340 ntBASIC2.01□□□□□ -2.09
Sdc1P18828 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
Sdc1P18828 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC2.01□□□□□ -2.09
Sdc1P18828 AC122225.1-201ENSMUST00000215641 369 ntBASIC2.01□□□□□ -2.09
Sdc1P18828 AC125223.1-203ENSMUST00000225304 498 ntBASIC2.01□□□□□ -2.09
Sdc1P18828 AC154600.1-201ENSMUST00000226480 714 ntBASIC2.01□□□□□ -2.09
Sdc1P18828 AC115735.3-201ENSMUST00000227757 513 ntBASIC2.01□□□□□ -2.09
Sdc1P18828 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
Sdc1P18828 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Sdc1P18828 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Sdc1P18828 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.01□□□□□ -2.09
Sdc1P18828 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Sdc1P18828 Gm6185-201ENSMUST00000193379 3553 ntBASIC2□□□□□ -2.09
Sdc1P18828 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2□□□□□ -2.09
Sdc1P18828 Gm26147-201ENSMUST00000104479 114 ntBASIC2□□□□□ -2.09
Sdc1P18828 Gm23911-201ENSMUST00000104596 134 ntBASIC2□□□□□ -2.09
Sdc1P18828 Gm14652-201ENSMUST00000118479 235 ntBASIC2□□□□□ -2.09
Sdc1P18828 Mup-ps17-201ENSMUST00000120723 218 ntBASIC2□□□□□ -2.09
Sdc1P18828 Gm11438-201ENSMUST00000121582 189 ntBASIC2□□□□□ -2.09
Sdc1P18828 Gm12071-201ENSMUST00000121968 469 ntBASIC2□□□□□ -2.09
Sdc1P18828 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC2□□□□□ -2.09
Sdc1P18828 Gm8289-201ENSMUST00000144814 1182 ntBASIC2□□□□□ -2.09
Sdc1P18828 Gm24784-201ENSMUST00000157640 62 ntBASIC2□□□□□ -2.09
Sdc1P18828 Gm26414-201ENSMUST00000157674 269 ntBASIC2□□□□□ -2.09
Sdc1P18828 Gm22382-201ENSMUST00000158185 130 ntBASIC2□□□□□ -2.09
Sdc1P18828 Gm24879-201ENSMUST00000158386 143 ntBASIC2□□□□□ -2.09
Sdc1P18828 Gm24056-201ENSMUST00000158617 146 ntBASIC2□□□□□ -2.09
Sdc1P18828 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC2□□□□□ -2.09
Sdc1P18828 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC2□□□□□ -2.09
Sdc1P18828 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC2□□□□□ -2.09
Sdc1P18828 Mir6335-201ENSMUST00000184081 98 ntBASIC2□□□□□ -2.09
Sdc1P18828 Gm28627-201ENSMUST00000186141 453 ntBASIC2□□□□□ -2.09
Sdc1P18828 Gm5116-201ENSMUST00000187732 463 ntBASIC2□□□□□ -2.09
Sdc1P18828 Gm29627-201ENSMUST00000187984 463 ntBASIC2□□□□□ -2.09
Sdc1P18828 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC2□□□□□ -2.09
Sdc1P18828 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC2□□□□□ -2.09
Sdc1P18828 Gm28951-201ENSMUST00000190742 313 ntBASIC2□□□□□ -2.09
Sdc1P18828 Gm32033-201ENSMUST00000193483 339 ntBASIC2□□□□□ -2.09
Sdc1P18828 Gm43114-201ENSMUST00000198298 343 ntBASIC2□□□□□ -2.09
Sdc1P18828 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC2□□□□□ -2.09
Sdc1P18828 AC156795.1-201ENSMUST00000214655 414 ntBASIC2□□□□□ -2.09
Sdc1P18828 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC2□□□□□ -2.09
Sdc1P18828 AC122465.2-201ENSMUST00000221774 354 ntBASIC2□□□□□ -2.09
Sdc1P18828 AC102603.1-201ENSMUST00000227481 584 ntBASIC2□□□□□ -2.09
Sdc1P18828 Gm24707-201ENSMUST00000082812 107 ntBASIC2□□□□□ -2.09
Sdc1P18828 Gm22578-201ENSMUST00000083730 107 ntBASIC2□□□□□ -2.09
Sdc1P18828 Gm22866-201ENSMUST00000083947 177 ntBASIC2□□□□□ -2.09
Sdc1P18828 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Sdc1P18828 Gm45257-201ENSMUST00000210301 3998 ntBASIC1.99□□□□□ -2.09
Sdc1P18828 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Sdc1P18828 Zfp640-202ENSMUST00000224116 1562 ntBASIC1.99□□□□□ -2.09
Sdc1P18828 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
Sdc1P18828 Gm24049-201ENSMUST00000102409 100 ntBASIC1.99□□□□□ -2.09
Sdc1P18828 Gm24118-201ENSMUST00000103972 126 ntBASIC1.99□□□□□ -2.09
Sdc1P18828 Gm22590-201ENSMUST00000104247 128 ntBASIC1.99□□□□□ -2.09
Sdc1P18828 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC1.99□□□□□ -2.09
Sdc1P18828 Gm9225-201ENSMUST00000121921 836 ntBASIC1.99□□□□□ -2.09
Sdc1P18828 Gm8080-201ENSMUST00000122046 1155 ntBASIC1.99□□□□□ -2.09
Sdc1P18828 Gm12755-201ENSMUST00000122297 282 ntBASIC1.99□□□□□ -2.09
Sdc1P18828 Gm14713-201ENSMUST00000122362 686 ntBASIC1.99□□□□□ -2.09
Sdc1P18828 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC1.99□□□□□ -2.09
Sdc1P18828 Gm23667-201ENSMUST00000157466 120 ntBASIC1.99□□□□□ -2.09
Sdc1P18828 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Sdc1P18828 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC1.99□□□□□ -2.09
Sdc1P18828 Gm22716-201ENSMUST00000177596 107 ntBASIC1.99□□□□□ -2.09
Sdc1P18828 Gm25451-201ENSMUST00000177832 121 ntBASIC1.99□□□□□ -2.09
Sdc1P18828 Gm22584-201ENSMUST00000177935 92 ntBASIC1.99□□□□□ -2.09
Sdc1P18828 Snord116l14-201ENSMUST00000179875 94 ntBASIC1.99□□□□□ -2.09
Sdc1P18828 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
Sdc1P18828 Gm19193-201ENSMUST00000190263 590 ntBASIC1.99□□□□□ -2.09
Sdc1P18828 Gm23370-202ENSMUST00000197008 129 ntBASIC1.99□□□□□ -2.09
Sdc1P18828 Gm43405-201ENSMUST00000198642 337 ntBASIC1.99□□□□□ -2.09
Sdc1P18828 Gm43232-201ENSMUST00000201346 364 ntBASIC1.99□□□□□ -2.09
Sdc1P18828 Gm44118-201ENSMUST00000204665 229 ntBASIC1.99□□□□□ -2.09
Sdc1P18828 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC1.99□□□□□ -2.09
Sdc1P18828 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC1.99□□□□□ -2.09
Sdc1P18828 AC162931.1-201ENSMUST00000214184 267 ntBASIC1.99□□□□□ -2.09
Sdc1P18828 AC111046.1-201ENSMUST00000217715 412 ntBASIC1.99□□□□□ -2.09
Sdc1P18828 CT030187.1-201ENSMUST00000220605 252 ntBASIC1.99□□□□□ -2.09
Sdc1P18828 Gm10298-201ENSMUST00000074801 265 ntBASIC1.99□□□□□ -2.09
Sdc1P18828 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC1.99□□□□□ -2.09
Sdc1P18828 Gm45393-201ENSMUST00000211634 2631 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 108.3 ms