Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.08□□□□□ -2.08
Cdx1P18111 AC167721.1-201ENSMUST00000217088 279 ntBASIC2.08□□□□□ -2.08
Cdx1P18111 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.08□□□□□ -2.08
Cdx1P18111 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.08□□□□□ -2.08
Cdx1P18111 Gm25796-201ENSMUST00000082645 163 ntBASIC2.08□□□□□ -2.08
Cdx1P18111 Gm22265-201ENSMUST00000082947 116 ntBASIC2.08□□□□□ -2.08
Cdx1P18111 Gm25402-201ENSMUST00000082966 131 ntBASIC2.08□□□□□ -2.08
Cdx1P18111 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.08□□□□□ -2.08
Cdx1P18111 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Cdx1P18111 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.07□□□□□ -2.08
Cdx1P18111 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.07□□□□□ -2.08
Cdx1P18111 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.07□□□□□ -2.08
Cdx1P18111 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.07□□□□□ -2.08
Cdx1P18111 Gm14593-201ENSMUST00000119948 294 ntBASIC2.07□□□□□ -2.08
Cdx1P18111 Gm24836-201ENSMUST00000122609 108 ntBASIC2.07□□□□□ -2.08
Cdx1P18111 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC2.07□□□□□ -2.08
Cdx1P18111 Gm25153-201ENSMUST00000157118 156 ntBASIC2.07□□□□□ -2.08
Cdx1P18111 Gm23032-201ENSMUST00000157995 107 ntBASIC2.07□□□□□ -2.08
Cdx1P18111 Gm25334-201ENSMUST00000158036 110 ntBASIC2.07□□□□□ -2.08
Cdx1P18111 Gm22527-201ENSMUST00000158816 106 ntBASIC2.07□□□□□ -2.08
Cdx1P18111 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Cdx1P18111 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
Cdx1P18111 Gm24082-201ENSMUST00000175175 83 ntBASIC2.07□□□□□ -2.08
Cdx1P18111 Gm23648-201ENSMUST00000180301 107 ntBASIC2.07□□□□□ -2.08
Cdx1P18111 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
Cdx1P18111 Ighv1-46-201ENSMUST00000193988 351 ntBASIC2.07□□□□□ -2.08
Cdx1P18111 Ighv1-68-201ENSMUST00000198789 294 ntBASIC2.07□□□□□ -2.08
Cdx1P18111 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC2.07□□□□□ -2.08
Cdx1P18111 Gm46136-201ENSMUST00000214730 565 ntBASIC2.07□□□□□ -2.08
Cdx1P18111 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC2.07□□□□□ -2.08
Cdx1P18111 Gm18346-201ENSMUST00000216782 325 ntBASIC2.07□□□□□ -2.08
Cdx1P18111 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC2.07□□□□□ -2.08
Cdx1P18111 Gm46994-201ENSMUST00000221523 219 ntBASIC2.07□□□□□ -2.08
Cdx1P18111 Gm5955-201ENSMUST00000222712 219 ntBASIC2.07□□□□□ -2.08
Cdx1P18111 Gm23506-201ENSMUST00000083077 107 ntBASIC2.07□□□□□ -2.08
Cdx1P18111 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
Cdx1P18111 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Cdx1P18111 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Cdx1P18111 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Cdx1P18111 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Cdx1P18111 Gm22782-201ENSMUST00000104082 132 ntBASIC2.06□□□□□ -2.08
Cdx1P18111 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC2.06□□□□□ -2.08
Cdx1P18111 Gm25280-201ENSMUST00000157269 101 ntBASIC2.06□□□□□ -2.08
Cdx1P18111 Gm24879-201ENSMUST00000158386 143 ntBASIC2.06□□□□□ -2.08
Cdx1P18111 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.06□□□□□ -2.08
Cdx1P18111 Gm3102-201ENSMUST00000164236 489 ntBASIC2.06□□□□□ -2.08
Cdx1P18111 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.06□□□□□ -2.08
Cdx1P18111 Gm17166-201ENSMUST00000172006 431 ntBASIC2.06□□□□□ -2.08
Cdx1P18111 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Cdx1P18111 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Cdx1P18111 Gm28825-201ENSMUST00000186233 238 ntBASIC2.06□□□□□ -2.08
Cdx1P18111 Gm28666-201ENSMUST00000186649 274 ntBASIC2.06□□□□□ -2.08
Cdx1P18111 Gm28412-201ENSMUST00000187243 177 ntBASIC2.06□□□□□ -2.08
Cdx1P18111 Gm38044-201ENSMUST00000192964 487 ntBASIC2.06□□□□□ -2.08
Cdx1P18111 Gm42578-201ENSMUST00000199960 194 ntBASIC2.06□□□□□ -2.08
Cdx1P18111 Gm44548-201ENSMUST00000208929 192 ntBASIC2.06□□□□□ -2.08
Cdx1P18111 AC133517.1-203ENSMUST00000225570 390 ntBASIC2.06□□□□□ -2.08
Cdx1P18111 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Cdx1P18111 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Cdx1P18111 Gm22974-201ENSMUST00000083301 103 ntBASIC2.06□□□□□ -2.08
Cdx1P18111 Mir93-201ENSMUST00000083593 88 ntBASIC2.06□□□□□ -2.08
Cdx1P18111 Snord7-201ENSMUST00000083781 97 ntBASIC2.06□□□□□ -2.08
Cdx1P18111 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Cdx1P18111 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Cdx1P18111 Gm23128-201ENSMUST00000104257 132 ntBASIC2.05□□□□□ -2.08
Cdx1P18111 Gm14897-201ENSMUST00000118213 207 ntBASIC2.05□□□□□ -2.08
Cdx1P18111 Gm14748-201ENSMUST00000119819 411 ntBASIC2.05□□□□□ -2.08
Cdx1P18111 Gm15177-201ENSMUST00000120491 577 ntBASIC2.05□□□□□ -2.08
Cdx1P18111 Gm15272-201ENSMUST00000120865 233 ntBASIC2.05□□□□□ -2.08
Cdx1P18111 Gm16428-201ENSMUST00000121193 723 ntBASIC2.05□□□□□ -2.08
Cdx1P18111 Gm9225-201ENSMUST00000121921 836 ntBASIC2.05□□□□□ -2.08
Cdx1P18111 Gm25808-201ENSMUST00000122784 284 ntBASIC2.05□□□□□ -2.08
Cdx1P18111 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC2.05□□□□□ -2.08
Cdx1P18111 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Cdx1P18111 Gm23538-201ENSMUST00000157535 101 ntBASIC2.05□□□□□ -2.08
Cdx1P18111 Gm22382-201ENSMUST00000158185 130 ntBASIC2.05□□□□□ -2.08
Cdx1P18111 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC2.05□□□□□ -2.08
Cdx1P18111 Gm6395-201ENSMUST00000167639 691 ntBASIC2.05□□□□□ -2.08
Cdx1P18111 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC2.05□□□□□ -2.08
Cdx1P18111 Gm21744-201ENSMUST00000178403 662 ntBASIC2.05□□□□□ -2.08
Cdx1P18111 Gm21171-201ENSMUST00000180048 673 ntBASIC2.05□□□□□ -2.08
Cdx1P18111 Mir7013-201ENSMUST00000183540 72 ntBASIC2.05□□□□□ -2.08
Cdx1P18111 Gm28000-201ENSMUST00000184380 85 ntBASIC2.05□□□□□ -2.08
Cdx1P18111 Gm29413-201ENSMUST00000186019 880 ntBASIC2.05□□□□□ -2.08
Cdx1P18111 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Cdx1P18111 Gm28700-201ENSMUST00000187614 579 ntBASIC2.05□□□□□ -2.08
Cdx1P18111 Gm29639-201ENSMUST00000188375 580 ntBASIC2.05□□□□□ -2.08
Cdx1P18111 Gm28843-201ENSMUST00000189198 678 ntBASIC2.05□□□□□ -2.08
Cdx1P18111 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Cdx1P18111 Gm29546-201ENSMUST00000191171 678 ntBASIC2.05□□□□□ -2.08
Cdx1P18111 Gm38311-201ENSMUST00000192945 165 ntBASIC2.05□□□□□ -2.08
Cdx1P18111 Gm23128-202ENSMUST00000196578 133 ntBASIC2.05□□□□□ -2.08
Cdx1P18111 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC2.05□□□□□ -2.08
Cdx1P18111 Gm45452-201ENSMUST00000210905 177 ntBASIC2.05□□□□□ -2.08
Cdx1P18111 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC2.05□□□□□ -2.08
Cdx1P18111 Gm9068-201ENSMUST00000217393 455 ntBASIC2.05□□□□□ -2.08
Cdx1P18111 Gm6109-201ENSMUST00000223297 348 ntBASIC2.05□□□□□ -2.08
Cdx1P18111 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Cdx1P18111 Olfr197-201ENSMUST00000080031 926 ntBASIC2.05□□□□□ -2.08
Cdx1P18111 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms