Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Msx1P13297 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Msx1P13297 Gm38269-201ENSMUST00000194549 3298 ntBASIC4.65□□□□□ -1.67
Msx1P13297 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
Msx1P13297 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Msx1P13297 Gm43130-201ENSMUST00000197721 3907 ntBASIC4.65□□□□□ -1.67
Msx1P13297 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Msx1P13297 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
Msx1P13297 Gm42946-201ENSMUST00000196108 2570 ntBASIC4.64□□□□□ -1.67
Msx1P13297 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Msx1P13297 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
Msx1P13297 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Msx1P13297 AC153801.2-201ENSMUST00000219875 3372 ntBASIC4.64□□□□□ -1.67
Msx1P13297 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Msx1P13297 Gm25377-201ENSMUST00000104334 129 ntBASIC4.64□□□□□ -1.67
Msx1P13297 Gm23320-201ENSMUST00000104462 127 ntBASIC4.64□□□□□ -1.67
Msx1P13297 Gm22493-201ENSMUST00000104494 132 ntBASIC4.64□□□□□ -1.67
Msx1P13297 Gm24371-201ENSMUST00000122662 267 ntBASIC4.64□□□□□ -1.67
Msx1P13297 Gm25913-201ENSMUST00000157617 135 ntBASIC4.64□□□□□ -1.67
Msx1P13297 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC4.64□□□□□ -1.67
Msx1P13297 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC4.64□□□□□ -1.67
Msx1P13297 Gm18011-201ENSMUST00000203717 565 ntBASIC4.64□□□□□ -1.67
Msx1P13297 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC4.64□□□□□ -1.67
Msx1P13297 AC123064.2-201ENSMUST00000217758 193 ntBASIC4.64□□□□□ -1.67
Msx1P13297 AC160984.2-201ENSMUST00000224927 791 ntBASIC4.64□□□□□ -1.67
Msx1P13297 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Msx1P13297 Olfr720-203ENSMUST00000216079 4692 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Msx1P13297 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC4.64□□□□□ -1.67
Msx1P13297 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Msx1P13297 Gm45235-201ENSMUST00000208016 4465 ntBASIC4.64□□□□□ -1.67
Msx1P13297 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
Msx1P13297 Gm44250-201ENSMUST00000203092 4229 ntBASIC4.64□□□□□ -1.67
Msx1P13297 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
Msx1P13297 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC4.63□□□□□ -1.67
Msx1P13297 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Msx1P13297 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Msx1P13297 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
Msx1P13297 Gm24276-201ENSMUST00000102181 110 ntBASIC4.63□□□□□ -1.67
Msx1P13297 Gm23193-201ENSMUST00000102427 82 ntBASIC4.63□□□□□ -1.67
Msx1P13297 Snord66-201ENSMUST00000104051 75 ntBASIC4.63□□□□□ -1.67
Msx1P13297 Gm15357-201ENSMUST00000119160 285 ntBASIC4.63□□□□□ -1.67
Msx1P13297 Gm24141-201ENSMUST00000122776 115 ntBASIC4.63□□□□□ -1.67
Msx1P13297 Gm25961-201ENSMUST00000157174 135 ntBASIC4.63□□□□□ -1.67
Msx1P13297 Gm23964-201ENSMUST00000157966 107 ntBASIC4.63□□□□□ -1.67
Msx1P13297 Gm26034-201ENSMUST00000158154 116 ntBASIC4.63□□□□□ -1.67
Msx1P13297 Mir1957b-201ENSMUST00000184608 123 ntBASIC4.63□□□□□ -1.67
Msx1P13297 Gm27753-201ENSMUST00000184742 203 ntBASIC4.63□□□□□ -1.67
Msx1P13297 Gm27760-201ENSMUST00000185048 114 ntBASIC4.63□□□□□ -1.67
Msx1P13297 Gm43563-201ENSMUST00000196761 198 ntBASIC4.63□□□□□ -1.67
Msx1P13297 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC4.63□□□□□ -1.67
Msx1P13297 Gm35405-201ENSMUST00000218754 400 ntBASIC4.63□□□□□ -1.67
Msx1P13297 AC161269.1-201ENSMUST00000228426 318 ntBASIC4.63□□□□□ -1.67
Msx1P13297 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Msx1P13297 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Msx1P13297 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Msx1P13297 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Msx1P13297 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Msx1P13297 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Msx1P13297 Gm37726-201ENSMUST00000193246 3886 ntBASIC4.62□□□□□ -1.67
Msx1P13297 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Msx1P13297 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
Msx1P13297 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
Msx1P13297 Gm23013-201ENSMUST00000104146 106 ntBASIC4.62□□□□□ -1.67
Msx1P13297 Gm13737-201ENSMUST00000119793 232 ntBASIC4.62□□□□□ -1.67
Msx1P13297 Gm7840-201ENSMUST00000122086 533 ntBASIC4.62□□□□□ -1.67
Msx1P13297 Gm24113-201ENSMUST00000157477 276 ntBASIC4.62□□□□□ -1.67
Msx1P13297 Gm26490-201ENSMUST00000157879 140 ntBASIC4.62□□□□□ -1.67
Msx1P13297 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Msx1P13297 AL645522.1-201ENSMUST00000197692 104 ntBASIC4.62□□□□□ -1.67
Msx1P13297 Gm44052-201ENSMUST00000203382 396 ntBASIC4.62□□□□□ -1.67
Msx1P13297 Gm9377-201ENSMUST00000207227 623 ntBASIC4.62□□□□□ -1.67
Msx1P13297 Gm25634-201ENSMUST00000082667 105 ntBASIC4.62□□□□□ -1.67
Msx1P13297 Snord59a-201ENSMUST00000082844 74 ntBASIC4.62□□□□□ -1.67
Msx1P13297 Gm23462-201ENSMUST00000083264 104 ntBASIC4.62□□□□□ -1.67
Msx1P13297 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
Msx1P13297 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Msx1P13297 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Msx1P13297 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Msx1P13297 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Msx1P13297 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC4.61□□□□□ -1.67
Msx1P13297 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Msx1P13297 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
Msx1P13297 Gm24831-201ENSMUST00000116778 126 ntBASIC4.61□□□□□ -1.67
Msx1P13297 Gm11790-201ENSMUST00000119569 455 ntBASIC4.61□□□□□ -1.67
Msx1P13297 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
Msx1P13297 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC4.61□□□□□ -1.67
Msx1P13297 Gm22967-201ENSMUST00000157956 239 ntBASIC4.61□□□□□ -1.67
Msx1P13297 Gm24944-201ENSMUST00000158330 128 ntBASIC4.61□□□□□ -1.67
Msx1P13297 Gm23337-201ENSMUST00000158959 118 ntBASIC4.61□□□□□ -1.67
Msx1P13297 Mir6960-201ENSMUST00000183449 61 ntBASIC4.61□□□□□ -1.67
Msx1P13297 AC132615.1-201ENSMUST00000213873 255 ntBASIC4.61□□□□□ -1.67
Msx1P13297 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Msx1P13297 Snora19-201ENSMUST00000082962 132 ntBASIC4.61□□□□□ -1.67
Msx1P13297 Gm23658-201ENSMUST00000083233 132 ntBASIC4.61□□□□□ -1.67
Msx1P13297 Gm23875-201ENSMUST00000083711 318 ntBASIC4.61□□□□□ -1.67
Msx1P13297 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Msx1P13297 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Msx1P13297 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
Msx1P13297 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Msx1P13297 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 122.2 ms