Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Cacna1bO55017 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Cacna1bO55017 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Cacna1bO55017 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Cacna1bO55017 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Cacna1bO55017 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Cacna1bO55017 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Cacna1bO55017 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Cacna1bO55017 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Cacna1bO55017 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Cacna1bO55017 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Cacna1bO55017 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
Cacna1bO55017 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Cacna1bO55017 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Cacna1bO55017 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Cacna1bO55017 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Cacna1bO55017 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Cacna1bO55017 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Cacna1bO55017 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Cacna1bO55017 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Cacna1bO55017 Gm29573-201ENSMUST00000190291 919 ntBASIC1.33□□□□□ -2.2
Cacna1bO55017 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC1.33□□□□□ -2.2
Cacna1bO55017 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Cacna1bO55017 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Cacna1bO55017 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Cacna1bO55017 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Cacna1bO55017 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Cacna1bO55017 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Cacna1bO55017 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Cacna1bO55017 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Cacna1bO55017 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
Cacna1bO55017 Gm43897-201ENSMUST00000204019 309 ntBASIC1.33□□□□□ -2.2
Cacna1bO55017 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC1.33□□□□□ -2.2
Cacna1bO55017 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Cacna1bO55017 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
Cacna1bO55017 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
Cacna1bO55017 Gm15282-201ENSMUST00000117707 300 ntBASIC1.32□□□□□ -2.2
Cacna1bO55017 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC1.32□□□□□ -2.2
Cacna1bO55017 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC1.32□□□□□ -2.2
Cacna1bO55017 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC1.32□□□□□ -2.2
Cacna1bO55017 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC1.32□□□□□ -2.2
Cacna1bO55017 Gm9541-201ENSMUST00000188409 502 ntBASIC1.32□□□□□ -2.2
Cacna1bO55017 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC1.32□□□□□ -2.2
Cacna1bO55017 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC1.32□□□□□ -2.2
Cacna1bO55017 Gm9632-201ENSMUST00000195934 643 ntBASIC1.32□□□□□ -2.2
Cacna1bO55017 Crs-ps-201ENSMUST00000203723 760 ntBASIC1.32□□□□□ -2.2
Cacna1bO55017 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
Cacna1bO55017 Gm19540-201ENSMUST00000221843 810 ntBASIC1.32□□□□□ -2.2
Cacna1bO55017 AC155167.3-201ENSMUST00000226349 217 ntBASIC1.32□□□□□ -2.2
Cacna1bO55017 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
Cacna1bO55017 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC1.32□□□□□ -2.2
Cacna1bO55017 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
Cacna1bO55017 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
Cacna1bO55017 Mir343-201ENSMUST00000102360 75 ntBASIC1.32□□□□□ -2.2
Cacna1bO55017 Gm11693-201ENSMUST00000119625 565 ntBASIC1.32□□□□□ -2.2
Cacna1bO55017 Gm9440-201ENSMUST00000119667 539 ntBASIC1.32□□□□□ -2.2
Cacna1bO55017 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC1.32□□□□□ -2.2
Cacna1bO55017 Gm7350-201ENSMUST00000120964 636 ntBASIC1.32□□□□□ -2.2
Cacna1bO55017 Gm24783-201ENSMUST00000157639 100 ntBASIC1.32□□□□□ -2.2
Cacna1bO55017 Gm23120-201ENSMUST00000157654 287 ntBASIC1.32□□□□□ -2.2
Cacna1bO55017 Gm24854-201ENSMUST00000158025 98 ntBASIC1.32□□□□□ -2.2
Cacna1bO55017 Gm23180-201ENSMUST00000158686 125 ntBASIC1.32□□□□□ -2.2
Cacna1bO55017 Gm23008-201ENSMUST00000158946 80 ntBASIC1.32□□□□□ -2.2
Cacna1bO55017 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
Cacna1bO55017 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC1.32□□□□□ -2.2
Cacna1bO55017 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC1.32□□□□□ -2.2
Cacna1bO55017 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC1.32□□□□□ -2.2
Cacna1bO55017 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC1.32□□□□□ -2.2
Cacna1bO55017 Gm38167-201ENSMUST00000195704 1178 ntBASIC1.32□□□□□ -2.2
Cacna1bO55017 Gm43096-201ENSMUST00000196173 421 ntBASIC1.32□□□□□ -2.2
Cacna1bO55017 Gm18340-201ENSMUST00000196342 609 ntBASIC1.32□□□□□ -2.2
Cacna1bO55017 AC122901.2-201ENSMUST00000216926 285 ntBASIC1.32□□□□□ -2.2
Cacna1bO55017 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC1.32□□□□□ -2.2
Cacna1bO55017 Olfr1193-201ENSMUST00000081697 957 ntBASIC1.32□□□□□ -2.2
Cacna1bO55017 Gm37061-201ENSMUST00000195066 3243 ntBASIC1.32□□□□□ -2.2
Cacna1bO55017 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
Cacna1bO55017 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
Cacna1bO55017 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
Cacna1bO55017 Gm22494-201ENSMUST00000104495 128 ntBASIC1.31□□□□□ -2.2
Cacna1bO55017 Gm11357-201ENSMUST00000119758 954 ntBASIC1.31□□□□□ -2.2
Cacna1bO55017 Gm5958-201ENSMUST00000147698 297 ntBASIC1.31□□□□□ -2.2
Cacna1bO55017 Gm23312-201ENSMUST00000158774 102 ntBASIC1.31□□□□□ -2.2
Cacna1bO55017 Gm17655-201ENSMUST00000167969 255 ntBASIC1.31□□□□□ -2.2
Cacna1bO55017 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
Cacna1bO55017 Gm27520-201ENSMUST00000184872 81 ntBASIC1.31□□□□□ -2.2
Cacna1bO55017 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC1.31□□□□□ -2.2
Cacna1bO55017 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC1.31□□□□□ -2.2
Cacna1bO55017 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC1.31□□□□□ -2.2
Cacna1bO55017 Gm45522-201ENSMUST00000210784 166 ntBASIC1.31□□□□□ -2.2
Cacna1bO55017 AC159293.2-201ENSMUST00000222289 424 ntBASIC1.31□□□□□ -2.2
Cacna1bO55017 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.31□□□□□ -2.2
Cacna1bO55017 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.31□□□□□ -2.2
Cacna1bO55017 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC1.31□□□□□ -2.2
Cacna1bO55017 AC124746.1-201ENSMUST00000227535 1300 ntBASIC1.31□□□□□ -2.2
Cacna1bO55017 Gm26154-201ENSMUST00000102339 96 ntBASIC1.31□□□□□ -2.2
Cacna1bO55017 Gm15125-201ENSMUST00000116185 800 ntBASIC1.31□□□□□ -2.2
Cacna1bO55017 Gm11898-201ENSMUST00000117161 385 ntBASIC1.31□□□□□ -2.2
Cacna1bO55017 Gm6985-201ENSMUST00000121255 271 ntBASIC1.31□□□□□ -2.2
Cacna1bO55017 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
Cacna1bO55017 Gm27607-201ENSMUST00000185162 122 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms