Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Gm14417-201ENSMUST00000120036 1074 ntBASIC2.8□□□□□ -1.96
Cldn5O54942 Gm15878-201ENSMUST00000127561 306 ntBASIC2.8□□□□□ -1.96
Cldn5O54942 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC2.8□□□□□ -1.96
Cldn5O54942 Gm26277-201ENSMUST00000157097 152 ntBASIC2.8□□□□□ -1.96
Cldn5O54942 Gm25624-201ENSMUST00000157222 275 ntBASIC2.8□□□□□ -1.96
Cldn5O54942 Gm23559-201ENSMUST00000157824 103 ntBASIC2.8□□□□□ -1.96
Cldn5O54942 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC2.8□□□□□ -1.96
Cldn5O54942 Mir3106-201ENSMUST00000175401 82 ntBASIC2.8□□□□□ -1.96
Cldn5O54942 Gm18416-201ENSMUST00000175635 1003 ntBASIC2.8□□□□□ -1.96
Cldn5O54942 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC2.8□□□□□ -1.96
Cldn5O54942 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC2.8□□□□□ -1.96
Cldn5O54942 Gm22131-201ENSMUST00000178415 94 ntBASIC2.8□□□□□ -1.96
Cldn5O54942 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC2.8□□□□□ -1.96
Cldn5O54942 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC2.8□□□□□ -1.96
Cldn5O54942 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC2.8□□□□□ -1.96
Cldn5O54942 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC2.8□□□□□ -1.96
Cldn5O54942 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC2.8□□□□□ -1.96
Cldn5O54942 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC2.8□□□□□ -1.96
Cldn5O54942 Gm27817-201ENSMUST00000184302 233 ntBASIC2.8□□□□□ -1.96
Cldn5O54942 Gm27245-201ENSMUST00000184385 376 ntBASIC2.8□□□□□ -1.96
Cldn5O54942 Gm6060-201ENSMUST00000188671 251 ntBASIC2.8□□□□□ -1.96
Cldn5O54942 Gm20915-201ENSMUST00000191575 663 ntBASIC2.8□□□□□ -1.96
Cldn5O54942 Gm37807-201ENSMUST00000194310 190 ntBASIC2.8□□□□□ -1.96
Cldn5O54942 Trbv24-201ENSMUST00000194614 347 ntBASIC2.8□□□□□ -1.96
Cldn5O54942 Gm37029-201ENSMUST00000195773 239 ntBASIC2.8□□□□□ -1.96
Cldn5O54942 Gm43402-201ENSMUST00000197159 159 ntBASIC2.8□□□□□ -1.96
Cldn5O54942 Gm18341-201ENSMUST00000197538 622 ntBASIC2.8□□□□□ -1.96
Cldn5O54942 Gm42578-201ENSMUST00000199960 194 ntBASIC2.8□□□□□ -1.96
Cldn5O54942 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC2.8□□□□□ -1.96
Cldn5O54942 Gm2628-201ENSMUST00000218019 426 ntBASIC2.8□□□□□ -1.96
Cldn5O54942 AC154484.1-201ENSMUST00000227311 771 ntBASIC2.8□□□□□ -1.96
Cldn5O54942 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Cldn5O54942 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC2.8□□□□□ -1.96
Cldn5O54942 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC2.8□□□□□ -1.96
Cldn5O54942 Gm43780-201ENSMUST00000196510 3600 ntBASIC2.8□□□□□ -1.96
Cldn5O54942 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Cldn5O54942 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Cldn5O54942 Gm17969-201ENSMUST00000185706 2557 ntBASIC2.79□□□□□ -1.96
Cldn5O54942 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC2.79□□□□□ -1.96
Cldn5O54942 Mir344c-201ENSMUST00000103919 92 ntBASIC2.79□□□□□ -1.96
Cldn5O54942 Mir465c-2-201ENSMUST00000104757 81 ntBASIC2.79□□□□□ -1.96
Cldn5O54942 Gm12793-201ENSMUST00000119268 292 ntBASIC2.79□□□□□ -1.96
Cldn5O54942 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC2.79□□□□□ -1.96
Cldn5O54942 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Cldn5O54942 Gm22985-201ENSMUST00000122754 116 ntBASIC2.79□□□□□ -1.96
Cldn5O54942 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Cldn5O54942 Gm22651-201ENSMUST00000157872 94 ntBASIC2.79□□□□□ -1.96
Cldn5O54942 Gm22076-201ENSMUST00000158601 84 ntBASIC2.79□□□□□ -1.96
Cldn5O54942 Gm7582-201ENSMUST00000160831 603 ntBASIC2.79□□□□□ -1.96
Cldn5O54942 Gm22853-201ENSMUST00000174974 131 ntBASIC2.79□□□□□ -1.96
Cldn5O54942 Gm20718-201ENSMUST00000176058 259 ntBASIC2.79□□□□□ -1.96
Cldn5O54942 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC2.79□□□□□ -1.96
Cldn5O54942 Mir6917-201ENSMUST00000184111 61 ntBASIC2.79□□□□□ -1.96
Cldn5O54942 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC2.79□□□□□ -1.96
Cldn5O54942 Gm43901-201ENSMUST00000203247 453 ntBASIC2.79□□□□□ -1.96
Cldn5O54942 Gm43991-201ENSMUST00000203751 274 ntBASIC2.79□□□□□ -1.96
Cldn5O54942 Gm44472-201ENSMUST00000204922 943 ntBASIC2.79□□□□□ -1.96
Cldn5O54942 Gm44754-201ENSMUST00000208155 400 ntBASIC2.79□□□□□ -1.96
Cldn5O54942 AC160984.2-201ENSMUST00000224927 791 ntBASIC2.79□□□□□ -1.96
Cldn5O54942 CT010506.2-201ENSMUST00000225618 183 ntBASIC2.79□□□□□ -1.96
Cldn5O54942 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Cldn5O54942 Gm25257-201ENSMUST00000083907 110 ntBASIC2.79□□□□□ -1.96
Cldn5O54942 Mir465c-1-201ENSMUST00000093560 81 ntBASIC2.79□□□□□ -1.96
Cldn5O54942 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Cldn5O54942 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Cldn5O54942 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Cldn5O54942 AC134917.1-201ENSMUST00000220517 1449 ntBASIC2.78□□□□□ -1.96
Cldn5O54942 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Cldn5O54942 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.78□□□□□ -1.96
Cldn5O54942 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
Cldn5O54942 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Cldn5O54942 Gm3940-201ENSMUST00000105087 432 ntBASIC2.78□□□□□ -1.96
Cldn5O54942 Gm12393-201ENSMUST00000117084 848 ntBASIC2.78□□□□□ -1.96
Cldn5O54942 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC2.78□□□□□ -1.96
Cldn5O54942 Gm11845-201ENSMUST00000117886 327 ntBASIC2.78□□□□□ -1.96
Cldn5O54942 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC2.78□□□□□ -1.96
Cldn5O54942 Gm12191-201ENSMUST00000118307 348 ntBASIC2.78□□□□□ -1.96
Cldn5O54942 Gm9703-201ENSMUST00000119573 343 ntBASIC2.78□□□□□ -1.96
Cldn5O54942 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC2.78□□□□□ -1.96
Cldn5O54942 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC2.78□□□□□ -1.96
Cldn5O54942 Gm13581-201ENSMUST00000120675 278 ntBASIC2.78□□□□□ -1.96
Cldn5O54942 Gm25808-201ENSMUST00000122784 284 ntBASIC2.78□□□□□ -1.96
Cldn5O54942 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC2.78□□□□□ -1.96
Cldn5O54942 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC2.78□□□□□ -1.96
Cldn5O54942 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Cldn5O54942 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC2.78□□□□□ -1.96
Cldn5O54942 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
Cldn5O54942 Gm25153-201ENSMUST00000157118 156 ntBASIC2.78□□□□□ -1.96
Cldn5O54942 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC2.78□□□□□ -1.96
Cldn5O54942 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC2.78□□□□□ -1.96
Cldn5O54942 Snord53-201ENSMUST00000175146 78 ntBASIC2.78□□□□□ -1.96
Cldn5O54942 Gm21673-201ENSMUST00000186640 436 ntBASIC2.78□□□□□ -1.96
Cldn5O54942 Gm29429-201ENSMUST00000187071 121 ntBASIC2.78□□□□□ -1.96
Cldn5O54942 Gm21135-201ENSMUST00000189023 436 ntBASIC2.78□□□□□ -1.96
Cldn5O54942 Gm42164-201ENSMUST00000198881 379 ntBASIC2.78□□□□□ -1.96
Cldn5O54942 Gm43513-201ENSMUST00000199779 1076 ntBASIC2.78□□□□□ -1.96
Cldn5O54942 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC2.78□□□□□ -1.96
Cldn5O54942 Igkv1-136-201ENSMUST00000200635 297 ntBASIC2.78□□□□□ -1.96
Cldn5O54942 Gm29848-201ENSMUST00000203107 295 ntBASIC2.78□□□□□ -1.96
Cldn5O54942 Gm45105-201ENSMUST00000207824 397 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 135.7 ms