Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 AC158598.2-201ENSMUST00000213397 3832 ntBASIC1.68□□□□□ -2.14
Ccdc180J3QNE4 Gm24579-201ENSMUST00000103964 144 ntBASIC1.68□□□□□ -2.14
Ccdc180J3QNE4 Gm11359-201ENSMUST00000120039 567 ntBASIC1.68□□□□□ -2.14
Ccdc180J3QNE4 Gm22107-201ENSMUST00000122548 100 ntBASIC1.68□□□□□ -2.14
Ccdc180J3QNE4 Gm22389-201ENSMUST00000158193 301 ntBASIC1.68□□□□□ -2.14
Ccdc180J3QNE4 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
Ccdc180J3QNE4 Gm29263-201ENSMUST00000188718 463 ntBASIC1.68□□□□□ -2.14
Ccdc180J3QNE4 Gm28384-201ENSMUST00000189079 463 ntBASIC1.68□□□□□ -2.14
Ccdc180J3QNE4 Gm43979-201ENSMUST00000203179 475 ntBASIC1.68□□□□□ -2.14
Ccdc180J3QNE4 Gm43978-201ENSMUST00000203491 451 ntBASIC1.68□□□□□ -2.14
Ccdc180J3QNE4 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Ccdc180J3QNE4 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Ccdc180J3QNE4 Gm24445-201ENSMUST00000083981 107 ntBASIC1.68□□□□□ -2.14
Ccdc180J3QNE4 Gm17038-201ENSMUST00000166586 494 ntBASIC1.67□□□□□ -2.14
Ccdc180J3QNE4 Gm25198-201ENSMUST00000178574 110 ntBASIC1.67□□□□□ -2.14
Ccdc180J3QNE4 Gm13901-201ENSMUST00000137252 468 ntBASIC1.67□□□□□ -2.14
Ccdc180J3QNE4 Gm19641-201ENSMUST00000188432 417 ntBASIC1.67□□□□□ -2.14
Ccdc180J3QNE4 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
Ccdc180J3QNE4 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC1.67□□□□□ -2.14
Ccdc180J3QNE4 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Ccdc180J3QNE4 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Ccdc180J3QNE4 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
Ccdc180J3QNE4 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
Ccdc180J3QNE4 Gm23708-201ENSMUST00000104367 123 ntBASIC1.65□□□□□ -2.15
Ccdc180J3QNE4 Gm14678-201ENSMUST00000121396 482 ntBASIC1.65□□□□□ -2.15
Ccdc180J3QNE4 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC1.65□□□□□ -2.15
Ccdc180J3QNE4 CT030254.3-201ENSMUST00000225959 1231 ntBASIC1.65□□□□□ -2.15
Ccdc180J3QNE4 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
Ccdc180J3QNE4 Gm25755-201ENSMUST00000083396 107 ntBASIC1.65□□□□□ -2.15
Ccdc180J3QNE4 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Ccdc180J3QNE4 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC1.64□□□□□ -2.15
Ccdc180J3QNE4 Gm29550-201ENSMUST00000185543 285 ntBASIC1.64□□□□□ -2.15
Ccdc180J3QNE4 Olfr931-ps1-201ENSMUST00000214941 549 ntBASIC1.64□□□□□ -2.15
Ccdc180J3QNE4 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Ccdc180J3QNE4 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
Ccdc180J3QNE4 Gm21737-201ENSMUST00000178112 664 ntBASIC1.64□□□□□ -2.15
Ccdc180J3QNE4 Gm21729-201ENSMUST00000180058 664 ntBASIC1.64□□□□□ -2.15
Ccdc180J3QNE4 Gm21853-201ENSMUST00000180071 664 ntBASIC1.64□□□□□ -2.15
Ccdc180J3QNE4 Gm20901-201ENSMUST00000180177 664 ntBASIC1.64□□□□□ -2.15
Ccdc180J3QNE4 Gm29073-201ENSMUST00000185563 664 ntBASIC1.64□□□□□ -2.15
Ccdc180J3QNE4 Gm29495-201ENSMUST00000189319 664 ntBASIC1.64□□□□□ -2.15
Ccdc180J3QNE4 Gm28090-201ENSMUST00000189458 664 ntBASIC1.64□□□□□ -2.15
Ccdc180J3QNE4 Gm21647-201ENSMUST00000189755 664 ntBASIC1.64□□□□□ -2.15
Ccdc180J3QNE4 Gm29165-201ENSMUST00000190655 664 ntBASIC1.64□□□□□ -2.15
Ccdc180J3QNE4 Gm29211-201ENSMUST00000191470 664 ntBASIC1.64□□□□□ -2.15
Ccdc180J3QNE4 Gm36891-201ENSMUST00000191995 655 ntBASIC1.64□□□□□ -2.15
Ccdc180J3QNE4 Gm44462-201ENSMUST00000199696 129 ntBASIC1.64□□□□□ -2.15
Ccdc180J3QNE4 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC1.64□□□□□ -2.15
Ccdc180J3QNE4 Gm44845-201ENSMUST00000208773 335 ntBASIC1.64□□□□□ -2.15
Ccdc180J3QNE4 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Ccdc180J3QNE4 Gm25079-201ENSMUST00000082529 203 ntBASIC1.64□□□□□ -2.15
Ccdc180J3QNE4 Gm25038-201ENSMUST00000082928 130 ntBASIC1.64□□□□□ -2.15
Ccdc180J3QNE4 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC1.64□□□□□ -2.15
Ccdc180J3QNE4 Gm26414-201ENSMUST00000157674 269 ntBASIC1.63□□□□□ -2.15
Ccdc180J3QNE4 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC1.63□□□□□ -2.15
Ccdc180J3QNE4 Gm14879-201ENSMUST00000117308 507 ntBASIC1.62□□□□□ -2.15
Ccdc180J3QNE4 Gm16129-201ENSMUST00000152628 486 ntBASIC1.62□□□□□ -2.15
Ccdc180J3QNE4 Gm36954-201ENSMUST00000195362 363 ntBASIC1.62□□□□□ -2.15
Ccdc180J3QNE4 CT030159.4-201ENSMUST00000221966 395 ntBASIC1.62□□□□□ -2.15
Ccdc180J3QNE4 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Ccdc180J3QNE4 Gm16411-201ENSMUST00000122164 1100 ntBASIC1.61□□□□□ -2.15
Ccdc180J3QNE4 Gm22839-201ENSMUST00000158436 304 ntBASIC1.61□□□□□ -2.15
Ccdc180J3QNE4 Gm8207-201ENSMUST00000171204 502 ntBASIC1.61□□□□□ -2.15
Ccdc180J3QNE4 Gm18416-201ENSMUST00000175635 1003 ntBASIC1.61□□□□□ -2.15
Ccdc180J3QNE4 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC1.61□□□□□ -2.15
Ccdc180J3QNE4 AC156559.1-201ENSMUST00000224158 222 ntBASIC1.61□□□□□ -2.15
Ccdc180J3QNE4 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC1.61□□□□□ -2.15
Ccdc180J3QNE4 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
Ccdc180J3QNE4 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Ccdc180J3QNE4 Gm43885-201ENSMUST00000204928 2542 ntBASIC1.61□□□□□ -2.15
Ccdc180J3QNE4 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC1.61□□□□□ -2.15
Ccdc180J3QNE4 Gm22315-201ENSMUST00000158010 143 ntBASIC1.61□□□□□ -2.15
Ccdc180J3QNE4 Gm22766-201ENSMUST00000158372 99 ntBASIC1.61□□□□□ -2.15
Ccdc180J3QNE4 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC1.61□□□□□ -2.15
Ccdc180J3QNE4 Gm17790-201ENSMUST00000191545 1228 ntBASIC1.61□□□□□ -2.15
Ccdc180J3QNE4 Gm43680-201ENSMUST00000199466 340 ntBASIC1.61□□□□□ -2.15
Ccdc180J3QNE4 Gm44585-201ENSMUST00000207150 607 ntBASIC1.61□□□□□ -2.15
Ccdc180J3QNE4 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC1.6□□□□□ -2.15
Ccdc180J3QNE4 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
Ccdc180J3QNE4 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
Ccdc180J3QNE4 Gm19244-201ENSMUST00000204340 253 ntBASIC1.6□□□□□ -2.15
Ccdc180J3QNE4 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
Ccdc180J3QNE4 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC1.59□□□□□ -2.15
Ccdc180J3QNE4 Mir3109-201ENSMUST00000175301 88 ntBASIC1.59□□□□□ -2.15
Ccdc180J3QNE4 Gm27762-201ENSMUST00000183417 109 ntBASIC1.59□□□□□ -2.15
Ccdc180J3QNE4 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC1.59□□□□□ -2.15
Ccdc180J3QNE4 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC1.59□□□□□ -2.15
Ccdc180J3QNE4 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC1.59□□□□□ -2.15
Ccdc180J3QNE4 Olfr197-201ENSMUST00000080031 926 ntBASIC1.59□□□□□ -2.15
Ccdc180J3QNE4 Snora3-201ENSMUST00000083082 132 ntBASIC1.59□□□□□ -2.15
Ccdc180J3QNE4 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC1.59□□□□□ -2.16
Ccdc180J3QNE4 Gm22689-201ENSMUST00000102452 110 ntBASIC1.58□□□□□ -2.16
Ccdc180J3QNE4 Gm14558-201ENSMUST00000117458 381 ntBASIC1.58□□□□□ -2.16
Ccdc180J3QNE4 Gm11572-201ENSMUST00000119164 120 ntBASIC1.58□□□□□ -2.16
Ccdc180J3QNE4 Gm27587-201ENSMUST00000185116 163 ntBASIC1.58□□□□□ -2.16
Ccdc180J3QNE4 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.58□□□□□ -2.16
Ccdc180J3QNE4 Gm18598-201ENSMUST00000207724 597 ntBASIC1.58□□□□□ -2.16
Ccdc180J3QNE4 Gm23735-201ENSMUST00000082551 134 ntBASIC1.58□□□□□ -2.16
Ccdc180J3QNE4 Snord65-201ENSMUST00000104269 72 ntBASIC1.58□□□□□ -2.16
Ccdc180J3QNE4 Gm11898-201ENSMUST00000117161 385 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms