Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm12982-201ENSMUST00000117408 190 ntBASIC3.74□□□□□ -1.81
Pcdh1F7BJK1 Gm14652-201ENSMUST00000118479 235 ntBASIC3.74□□□□□ -1.81
Pcdh1F7BJK1 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC3.74□□□□□ -1.81
Pcdh1F7BJK1 Gm11456-201ENSMUST00000121070 256 ntBASIC3.74□□□□□ -1.81
Pcdh1F7BJK1 Gm14810-201ENSMUST00000121628 486 ntBASIC3.74□□□□□ -1.81
Pcdh1F7BJK1 Gm25967-201ENSMUST00000157168 147 ntBASIC3.74□□□□□ -1.81
Pcdh1F7BJK1 Gm24005-201ENSMUST00000158459 296 ntBASIC3.74□□□□□ -1.81
Pcdh1F7BJK1 Gm24552-201ENSMUST00000158646 103 ntBASIC3.74□□□□□ -1.81
Pcdh1F7BJK1 Gm23702-201ENSMUST00000158840 130 ntBASIC3.74□□□□□ -1.81
Pcdh1F7BJK1 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
Pcdh1F7BJK1 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC3.74□□□□□ -1.81
Pcdh1F7BJK1 Gm44525-201ENSMUST00000183129 2634 ntBASIC3.74□□□□□ -1.81
Pcdh1F7BJK1 Gm29704-201ENSMUST00000196011 253 ntBASIC3.74□□□□□ -1.81
Pcdh1F7BJK1 Gm43424-201ENSMUST00000200484 253 ntBASIC3.74□□□□□ -1.81
Pcdh1F7BJK1 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC3.74□□□□□ -1.81
Pcdh1F7BJK1 Fth-ps3-201ENSMUST00000210405 358 ntBASIC3.74□□□□□ -1.81
Pcdh1F7BJK1 Gm45273-201ENSMUST00000211559 281 ntBASIC3.74□□□□□ -1.81
Pcdh1F7BJK1 Gm22806-201ENSMUST00000082738 136 ntBASIC3.74□□□□□ -1.81
Pcdh1F7BJK1 Gm22353-201ENSMUST00000083918 136 ntBASIC3.74□□□□□ -1.81
Pcdh1F7BJK1 n-R5s151-201ENSMUST00000083959 119 ntBASIC3.74□□□□□ -1.81
Pcdh1F7BJK1 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Pcdh1F7BJK1 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Pcdh1F7BJK1 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Pcdh1F7BJK1 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Pcdh1F7BJK1 Gm24867-201ENSMUST00000104161 107 ntBASIC3.73□□□□□ -1.81
Pcdh1F7BJK1 Gm24831-201ENSMUST00000116778 126 ntBASIC3.73□□□□□ -1.81
Pcdh1F7BJK1 Gm23841-201ENSMUST00000116951 114 ntBASIC3.73□□□□□ -1.81
Pcdh1F7BJK1 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC3.73□□□□□ -1.81
Pcdh1F7BJK1 Gm12721-201ENSMUST00000120621 268 ntBASIC3.73□□□□□ -1.81
Pcdh1F7BJK1 Gm14916-201ENSMUST00000121904 204 ntBASIC3.73□□□□□ -1.81
Pcdh1F7BJK1 Gm13868-201ENSMUST00000122411 294 ntBASIC3.73□□□□□ -1.81
Pcdh1F7BJK1 Gm23887-201ENSMUST00000122683 172 ntBASIC3.73□□□□□ -1.81
Pcdh1F7BJK1 Gm10444-201ENSMUST00000126708 148 ntBASIC3.73□□□□□ -1.81
Pcdh1F7BJK1 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC3.73□□□□□ -1.81
Pcdh1F7BJK1 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Pcdh1F7BJK1 Gm22277-201ENSMUST00000157204 277 ntBASIC3.73□□□□□ -1.81
Pcdh1F7BJK1 Gm23231-201ENSMUST00000157299 104 ntBASIC3.73□□□□□ -1.81
Pcdh1F7BJK1 Gm25054-201ENSMUST00000157370 97 ntBASIC3.73□□□□□ -1.81
Pcdh1F7BJK1 Gm17528-201ENSMUST00000171026 239 ntBASIC3.73□□□□□ -1.81
Pcdh1F7BJK1 Gm18520-201ENSMUST00000174783 658 ntBASIC3.73□□□□□ -1.81
Pcdh1F7BJK1 Gm27883-201ENSMUST00000183941 102 ntBASIC3.73□□□□□ -1.81
Pcdh1F7BJK1 Gm27733-201ENSMUST00000184803 68 ntBASIC3.73□□□□□ -1.81
Pcdh1F7BJK1 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Pcdh1F7BJK1 Gm30280-201ENSMUST00000192214 262 ntBASIC3.73□□□□□ -1.81
Pcdh1F7BJK1 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC3.73□□□□□ -1.81
Pcdh1F7BJK1 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC3.73□□□□□ -1.81
Pcdh1F7BJK1 CT954323.1-201ENSMUST00000222774 229 ntBASIC3.73□□□□□ -1.81
Pcdh1F7BJK1 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC3.73□□□□□ -1.81
Pcdh1F7BJK1 Gm5899-201ENSMUST00000071770 270 ntBASIC3.73□□□□□ -1.81
Pcdh1F7BJK1 Gm22685-201ENSMUST00000082848 106 ntBASIC3.73□□□□□ -1.81
Pcdh1F7BJK1 Gm22350-201ENSMUST00000083924 156 ntBASIC3.73□□□□□ -1.81
Pcdh1F7BJK1 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Pcdh1F7BJK1 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Pcdh1F7BJK1 Gm12080-201ENSMUST00000119821 1883 ntBASIC3.73□□□□□ -1.81
Pcdh1F7BJK1 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
Pcdh1F7BJK1 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Pcdh1F7BJK1 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Pcdh1F7BJK1 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Pcdh1F7BJK1 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Pcdh1F7BJK1 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
Pcdh1F7BJK1 Gm42993-201ENSMUST00000196856 7325 ntBASIC3.72□□□□□ -1.81
Pcdh1F7BJK1 Gm15002-201ENSMUST00000118406 452 ntBASIC3.72□□□□□ -1.81
Pcdh1F7BJK1 Gm14838-201ENSMUST00000118913 248 ntBASIC3.72□□□□□ -1.81
Pcdh1F7BJK1 Gm16327-201ENSMUST00000137146 228 ntBASIC3.72□□□□□ -1.81
Pcdh1F7BJK1 Gm11281-201ENSMUST00000141391 576 ntBASIC3.72□□□□□ -1.81
Pcdh1F7BJK1 Gm26414-201ENSMUST00000157674 269 ntBASIC3.72□□□□□ -1.81
Pcdh1F7BJK1 Gm26186-201ENSMUST00000157689 125 ntBASIC3.72□□□□□ -1.81
Pcdh1F7BJK1 Gm25264-201ENSMUST00000158519 117 ntBASIC3.72□□□□□ -1.81
Pcdh1F7BJK1 Gm22135-201ENSMUST00000158752 108 ntBASIC3.72□□□□□ -1.81
Pcdh1F7BJK1 Nron-204ENSMUST00000158971 370 ntBASIC3.72□□□□□ -1.81
Pcdh1F7BJK1 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC3.72□□□□□ -1.81
Pcdh1F7BJK1 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Pcdh1F7BJK1 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Pcdh1F7BJK1 Gm34091-201ENSMUST00000200875 604 ntBASIC3.72□□□□□ -1.81
Pcdh1F7BJK1 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Pcdh1F7BJK1 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Pcdh1F7BJK1 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC3.72□□□□□ -1.81
Pcdh1F7BJK1 Gm25698-201ENSMUST00000082897 107 ntBASIC3.72□□□□□ -1.81
Pcdh1F7BJK1 Gm22868-201ENSMUST00000083955 164 ntBASIC3.72□□□□□ -1.81
Pcdh1F7BJK1 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Pcdh1F7BJK1 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Pcdh1F7BJK1 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Pcdh1F7BJK1 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Pcdh1F7BJK1 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.71□□□□□ -1.81
Pcdh1F7BJK1 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Pcdh1F7BJK1 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Pcdh1F7BJK1 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
Pcdh1F7BJK1 Gm14971-201ENSMUST00000117980 663 ntBASIC3.71□□□□□ -1.82
Pcdh1F7BJK1 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC3.71□□□□□ -1.82
Pcdh1F7BJK1 Gm11572-201ENSMUST00000119164 120 ntBASIC3.71□□□□□ -1.82
Pcdh1F7BJK1 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Pcdh1F7BJK1 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Pcdh1F7BJK1 Gm23956-201ENSMUST00000157211 119 ntBASIC3.71□□□□□ -1.82
Pcdh1F7BJK1 Gm22538-201ENSMUST00000158169 299 ntBASIC3.71□□□□□ -1.82
Pcdh1F7BJK1 Gm26028-201ENSMUST00000158660 294 ntBASIC3.71□□□□□ -1.82
Pcdh1F7BJK1 Gm3370-201ENSMUST00000171785 500 ntBASIC3.71□□□□□ -1.82
Pcdh1F7BJK1 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC3.71□□□□□ -1.82
Pcdh1F7BJK1 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
Pcdh1F7BJK1 Gm25450-201ENSMUST00000179144 107 ntBASIC3.71□□□□□ -1.82
Pcdh1F7BJK1 Gm25235-201ENSMUST00000179933 107 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 97.4 ms