Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 AC124542.1-201ENSMUST00000205588 908 ntBASIC2.79□□□□□ -1.96
Srp54bE9PXC0 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Srp54bE9PXC0 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
Srp54bE9PXC0 Gm17890-201ENSMUST00000221419 757 ntBASIC2.79□□□□□ -1.96
Srp54bE9PXC0 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC2.79□□□□□ -1.96
Srp54bE9PXC0 AC102291.2-201ENSMUST00000228083 367 ntBASIC2.79□□□□□ -1.96
Srp54bE9PXC0 AC117202.3-201ENSMUST00000228532 310 ntBASIC2.79□□□□□ -1.96
Srp54bE9PXC0 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC2.79□□□□□ -1.96
Srp54bE9PXC0 Gm24948-201ENSMUST00000082866 207 ntBASIC2.79□□□□□ -1.96
Srp54bE9PXC0 Gm24035-201ENSMUST00000082867 107 ntBASIC2.79□□□□□ -1.96
Srp54bE9PXC0 Mir137-201ENSMUST00000083635 73 ntBASIC2.79□□□□□ -1.96
Srp54bE9PXC0 Gm22154-201ENSMUST00000083844 131 ntBASIC2.79□□□□□ -1.96
Srp54bE9PXC0 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC2.79□□□□□ -1.96
Srp54bE9PXC0 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Srp54bE9PXC0 Gm10343-201ENSMUST00000096279 348 ntBASIC2.79□□□□□ -1.96
Srp54bE9PXC0 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC2.79□□□□□ -1.96
Srp54bE9PXC0 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Srp54bE9PXC0 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Srp54bE9PXC0 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Srp54bE9PXC0 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Srp54bE9PXC0 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Srp54bE9PXC0 Gm23128-201ENSMUST00000104257 132 ntBASIC2.78□□□□□ -1.96
Srp54bE9PXC0 Gm13806-201ENSMUST00000117822 325 ntBASIC2.78□□□□□ -1.96
Srp54bE9PXC0 Gm11845-201ENSMUST00000117886 327 ntBASIC2.78□□□□□ -1.96
Srp54bE9PXC0 Gm11991-201ENSMUST00000119652 1074 ntBASIC2.78□□□□□ -1.96
Srp54bE9PXC0 Gm11358-201ENSMUST00000122310 373 ntBASIC2.78□□□□□ -1.96
Srp54bE9PXC0 Gm25945-201ENSMUST00000122484 135 ntBASIC2.78□□□□□ -1.96
Srp54bE9PXC0 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC2.78□□□□□ -1.96
Srp54bE9PXC0 Gm23981-201ENSMUST00000157136 106 ntBASIC2.78□□□□□ -1.96
Srp54bE9PXC0 Gm22416-201ENSMUST00000158590 88 ntBASIC2.78□□□□□ -1.96
Srp54bE9PXC0 Gm25119-201ENSMUST00000158815 88 ntBASIC2.78□□□□□ -1.96
Srp54bE9PXC0 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Srp54bE9PXC0 Gm7582-201ENSMUST00000160831 603 ntBASIC2.78□□□□□ -1.96
Srp54bE9PXC0 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Srp54bE9PXC0 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC2.78□□□□□ -1.96
Srp54bE9PXC0 Gm24757-201ENSMUST00000176987 371 ntBASIC2.78□□□□□ -1.96
Srp54bE9PXC0 Gm11395-201ENSMUST00000181011 499 ntBASIC2.78□□□□□ -1.96
Srp54bE9PXC0 Mir6402-201ENSMUST00000183406 80 ntBASIC2.78□□□□□ -1.96
Srp54bE9PXC0 Gm27470-201ENSMUST00000184070 210 ntBASIC2.78□□□□□ -1.96
Srp54bE9PXC0 Gm27582-201ENSMUST00000184084 126 ntBASIC2.78□□□□□ -1.96
Srp54bE9PXC0 Mir496b-201ENSMUST00000184935 113 ntBASIC2.78□□□□□ -1.96
Srp54bE9PXC0 Gm28648-201ENSMUST00000190092 343 ntBASIC2.78□□□□□ -1.96
Srp54bE9PXC0 Gm18692-201ENSMUST00000193047 511 ntBASIC2.78□□□□□ -1.96
Srp54bE9PXC0 Gm23128-202ENSMUST00000196578 133 ntBASIC2.78□□□□□ -1.96
Srp54bE9PXC0 Gm19202-201ENSMUST00000198096 808 ntBASIC2.78□□□□□ -1.96
Srp54bE9PXC0 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC2.78□□□□□ -1.96
Srp54bE9PXC0 Gm18635-201ENSMUST00000199020 1060 ntBASIC2.78□□□□□ -1.96
Srp54bE9PXC0 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.78□□□□□ -1.96
Srp54bE9PXC0 Gm45772-201ENSMUST00000212961 240 ntBASIC2.78□□□□□ -1.96
Srp54bE9PXC0 AC157654.1-201ENSMUST00000224130 820 ntBASIC2.78□□□□□ -1.96
Srp54bE9PXC0 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Srp54bE9PXC0 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Srp54bE9PXC0 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC2.77□□□□□ -1.97
Srp54bE9PXC0 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
Srp54bE9PXC0 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Srp54bE9PXC0 Gm13329-201ENSMUST00000117063 265 ntBASIC2.77□□□□□ -1.97
Srp54bE9PXC0 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC2.77□□□□□ -1.97
Srp54bE9PXC0 Gm14821-201ENSMUST00000121975 435 ntBASIC2.77□□□□□ -1.97
Srp54bE9PXC0 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC2.77□□□□□ -1.97
Srp54bE9PXC0 Gm26277-201ENSMUST00000157097 152 ntBASIC2.77□□□□□ -1.97
Srp54bE9PXC0 Gm24439-201ENSMUST00000157894 117 ntBASIC2.77□□□□□ -1.97
Srp54bE9PXC0 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Srp54bE9PXC0 Gm28628-201ENSMUST00000187006 264 ntBASIC2.77□□□□□ -1.97
Srp54bE9PXC0 Gm29216-201ENSMUST00000187117 492 ntBASIC2.77□□□□□ -1.97
Srp54bE9PXC0 Gm28629-201ENSMUST00000187309 263 ntBASIC2.77□□□□□ -1.97
Srp54bE9PXC0 Gm29516-201ENSMUST00000190402 468 ntBASIC2.77□□□□□ -1.97
Srp54bE9PXC0 Gm37866-201ENSMUST00000191950 696 ntBASIC2.77□□□□□ -1.97
Srp54bE9PXC0 Gm44966-201ENSMUST00000208096 157 ntBASIC2.77□□□□□ -1.97
Srp54bE9PXC0 Gm45452-201ENSMUST00000210905 177 ntBASIC2.77□□□□□ -1.97
Srp54bE9PXC0 AC153541.1-201ENSMUST00000213786 294 ntBASIC2.77□□□□□ -1.97
Srp54bE9PXC0 AC153957.1-201ENSMUST00000215235 229 ntBASIC2.77□□□□□ -1.97
Srp54bE9PXC0 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC2.77□□□□□ -1.97
Srp54bE9PXC0 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC2.77□□□□□ -1.97
Srp54bE9PXC0 CT009713.6-201ENSMUST00000223615 294 ntBASIC2.77□□□□□ -1.97
Srp54bE9PXC0 AC241593.1-201ENSMUST00000224768 397 ntBASIC2.77□□□□□ -1.97
Srp54bE9PXC0 AC132881.2-201ENSMUST00000225474 709 ntBASIC2.77□□□□□ -1.97
Srp54bE9PXC0 AC115291.1-201ENSMUST00000226803 258 ntBASIC2.77□□□□□ -1.97
Srp54bE9PXC0 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Srp54bE9PXC0 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC2.77□□□□□ -1.97
Srp54bE9PXC0 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC2.77□□□□□ -1.97
Srp54bE9PXC0 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Srp54bE9PXC0 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Srp54bE9PXC0 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Srp54bE9PXC0 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Srp54bE9PXC0 Gm14448-201ENSMUST00000116383 210 ntBASIC2.76□□□□□ -1.97
Srp54bE9PXC0 Gm13581-201ENSMUST00000120675 278 ntBASIC2.76□□□□□ -1.97
Srp54bE9PXC0 DQ267100-201ENSMUST00000122600 72 ntBASIC2.76□□□□□ -1.97
Srp54bE9PXC0 Gm25153-201ENSMUST00000157118 156 ntBASIC2.76□□□□□ -1.97
Srp54bE9PXC0 Gm26406-201ENSMUST00000158503 124 ntBASIC2.76□□□□□ -1.97
Srp54bE9PXC0 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC2.76□□□□□ -1.97
Srp54bE9PXC0 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Srp54bE9PXC0 Gm20656-201ENSMUST00000176925 518 ntBASIC2.76□□□□□ -1.97
Srp54bE9PXC0 Gm21893-201ENSMUST00000179119 397 ntBASIC2.76□□□□□ -1.97
Srp54bE9PXC0 Mir6386-201ENSMUST00000183558 104 ntBASIC2.76□□□□□ -1.97
Srp54bE9PXC0 Mir7242-201ENSMUST00000183710 79 ntBASIC2.76□□□□□ -1.97
Srp54bE9PXC0 Gm27245-201ENSMUST00000184385 376 ntBASIC2.76□□□□□ -1.97
Srp54bE9PXC0 Gm29553-201ENSMUST00000189692 279 ntBASIC2.76□□□□□ -1.97
Srp54bE9PXC0 Gm7837-201ENSMUST00000190873 412 ntBASIC2.76□□□□□ -1.97
Srp54bE9PXC0 Gm37641-201ENSMUST00000193837 239 ntBASIC2.76□□□□□ -1.97
Srp54bE9PXC0 Trbv24-201ENSMUST00000194614 347 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 99 ms