Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.9□□□□□ -2.11
Chd3B1AR17 Gm7171-201ENSMUST00000177413 1349 ntBASIC1.9□□□□□ -2.11
Chd3B1AR17 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Chd3B1AR17 Mup-ps12-201ENSMUST00000126217 549 ntBASIC1.89□□□□□ -2.11
Chd3B1AR17 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC1.89□□□□□ -2.11
Chd3B1AR17 Gm23340-201ENSMUST00000158955 123 ntBASIC1.89□□□□□ -2.11
Chd3B1AR17 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC1.89□□□□□ -2.11
Chd3B1AR17 Gm9022-202ENSMUST00000183285 483 ntBASIC1.89□□□□□ -2.11
Chd3B1AR17 Gm6590-201ENSMUST00000203343 687 ntBASIC1.89□□□□□ -2.11
Chd3B1AR17 Gm44720-201ENSMUST00000206076 260 ntBASIC1.89□□□□□ -2.11
Chd3B1AR17 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC1.89□□□□□ -2.11
Chd3B1AR17 Gm45461-201ENSMUST00000211726 4535 ntBASIC1.89□□□□□ -2.11
Chd3B1AR17 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Chd3B1AR17 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Chd3B1AR17 Gm24126-201ENSMUST00000104111 106 ntBASIC1.89□□□□□ -2.11
Chd3B1AR17 Gm13432-201ENSMUST00000118861 241 ntBASIC1.89□□□□□ -2.11
Chd3B1AR17 Gm13678-201ENSMUST00000118926 340 ntBASIC1.89□□□□□ -2.11
Chd3B1AR17 Gm26652-202ENSMUST00000181672 475 ntBASIC1.89□□□□□ -2.11
Chd3B1AR17 Gm5224-201ENSMUST00000183060 350 ntBASIC1.89□□□□□ -2.11
Chd3B1AR17 Mir6352-201ENSMUST00000184495 116 ntBASIC1.89□□□□□ -2.11
Chd3B1AR17 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC1.89□□□□□ -2.11
Chd3B1AR17 Gm37979-201ENSMUST00000193065 712 ntBASIC1.89□□□□□ -2.11
Chd3B1AR17 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC1.89□□□□□ -2.11
Chd3B1AR17 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC1.89□□□□□ -2.11
Chd3B1AR17 Gm23463-201ENSMUST00000122468 99 ntBASIC1.88□□□□□ -2.11
Chd3B1AR17 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Chd3B1AR17 Gm5709-201ENSMUST00000177879 1165 ntBASIC1.88□□□□□ -2.11
Chd3B1AR17 Gm25792-201ENSMUST00000083289 100 ntBASIC1.88□□□□□ -2.11
Chd3B1AR17 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Chd3B1AR17 Mir599-201ENSMUST00000102378 88 ntBASIC1.87□□□□□ -2.11
Chd3B1AR17 Gm12721-201ENSMUST00000120621 268 ntBASIC1.87□□□□□ -2.11
Chd3B1AR17 Gm14126-201ENSMUST00000122345 395 ntBASIC1.87□□□□□ -2.11
Chd3B1AR17 Gm7858-201ENSMUST00000190177 622 ntBASIC1.87□□□□□ -2.11
Chd3B1AR17 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC1.87□□□□□ -2.11
Chd3B1AR17 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC1.87□□□□□ -2.11
Chd3B1AR17 Gm42506-201ENSMUST00000202009 150 ntBASIC1.87□□□□□ -2.11
Chd3B1AR17 Gm44088-201ENSMUST00000204595 237 ntBASIC1.87□□□□□ -2.11
Chd3B1AR17 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
Chd3B1AR17 Gm44938-201ENSMUST00000208614 427 ntBASIC1.87□□□□□ -2.11
Chd3B1AR17 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Chd3B1AR17 Gm15303-201ENSMUST00000118676 2624 ntBASIC1.87□□□□□ -2.11
Chd3B1AR17 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.87□□□□□ -2.11
Chd3B1AR17 Gm26421-201ENSMUST00000104279 132 ntBASIC1.87□□□□□ -2.11
Chd3B1AR17 Mir208b-201ENSMUST00000104735 77 ntBASIC1.87□□□□□ -2.11
Chd3B1AR17 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC1.87□□□□□ -2.11
Chd3B1AR17 Gm11935-201ENSMUST00000118608 399 ntBASIC1.87□□□□□ -2.11
Chd3B1AR17 Gm16100-201ENSMUST00000120489 231 ntBASIC1.87□□□□□ -2.11
Chd3B1AR17 Gm9001-201ENSMUST00000121642 399 ntBASIC1.87□□□□□ -2.11
Chd3B1AR17 Gm22228-201ENSMUST00000157364 101 ntBASIC1.87□□□□□ -2.11
Chd3B1AR17 Gm25666-201ENSMUST00000157702 107 ntBASIC1.87□□□□□ -2.11
Chd3B1AR17 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Chd3B1AR17 Gm20811-201ENSMUST00000190500 553 ntBASIC1.87□□□□□ -2.11
Chd3B1AR17 Gm37213-201ENSMUST00000193077 586 ntBASIC1.87□□□□□ -2.11
Chd3B1AR17 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC1.87□□□□□ -2.11
Chd3B1AR17 Gm17937-201ENSMUST00000197908 742 ntBASIC1.87□□□□□ -2.11
Chd3B1AR17 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC1.87□□□□□ -2.11
Chd3B1AR17 AC154271.1-201ENSMUST00000224780 383 ntBASIC1.87□□□□□ -2.11
Chd3B1AR17 AC155314.1-201ENSMUST00000227624 508 ntBASIC1.87□□□□□ -2.11
Chd3B1AR17 Gm22293-201ENSMUST00000083314 109 ntBASIC1.87□□□□□ -2.11
Chd3B1AR17 Mir30d-201ENSMUST00000083503 82 ntBASIC1.87□□□□□ -2.11
Chd3B1AR17 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC1.86□□□□□ -2.11
Chd3B1AR17 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
Chd3B1AR17 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC1.86□□□□□ -2.11
Chd3B1AR17 Gm13409-201ENSMUST00000122072 546 ntBASIC1.86□□□□□ -2.11
Chd3B1AR17 Gm23469-201ENSMUST00000157131 104 ntBASIC1.86□□□□□ -2.11
Chd3B1AR17 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC1.86□□□□□ -2.11
Chd3B1AR17 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Chd3B1AR17 AC153529.1-201ENSMUST00000217818 370 ntBASIC1.86□□□□□ -2.11
Chd3B1AR17 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC1.86□□□□□ -2.11
Chd3B1AR17 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Chd3B1AR17 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC1.86□□□□□ -2.11
Chd3B1AR17 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Chd3B1AR17 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Chd3B1AR17 Gm38255-201ENSMUST00000194910 2996 ntBASIC1.86□□□□□ -2.11
Chd3B1AR17 Gm13457-201ENSMUST00000117885 267 ntBASIC1.86□□□□□ -2.11
Chd3B1AR17 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Chd3B1AR17 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC1.86□□□□□ -2.11
Chd3B1AR17 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC1.86□□□□□ -2.11
Chd3B1AR17 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Chd3B1AR17 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC1.86□□□□□ -2.11
Chd3B1AR17 Gm43142-201ENSMUST00000198670 361 ntBASIC1.86□□□□□ -2.11
Chd3B1AR17 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC1.86□□□□□ -2.11
Chd3B1AR17 CT030166.2-201ENSMUST00000222021 368 ntBASIC1.86□□□□□ -2.11
Chd3B1AR17 Gm22353-201ENSMUST00000083918 136 ntBASIC1.86□□□□□ -2.11
Chd3B1AR17 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Chd3B1AR17 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Chd3B1AR17 Gm17969-201ENSMUST00000185706 2557 ntBASIC1.85□□□□□ -2.11
Chd3B1AR17 Gm15526-201ENSMUST00000112504 204 ntBASIC1.85□□□□□ -2.11
Chd3B1AR17 Gm11490-201ENSMUST00000118128 272 ntBASIC1.85□□□□□ -2.11
Chd3B1AR17 Gm12934-201ENSMUST00000119221 343 ntBASIC1.85□□□□□ -2.11
Chd3B1AR17 Gm25026-201ENSMUST00000175017 188 ntBASIC1.85□□□□□ -2.11
Chd3B1AR17 Gm29516-201ENSMUST00000190402 468 ntBASIC1.85□□□□□ -2.11
Chd3B1AR17 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC1.85□□□□□ -2.11
Chd3B1AR17 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC1.85□□□□□ -2.11
Chd3B1AR17 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Chd3B1AR17 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Chd3B1AR17 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Chd3B1AR17 Gm6913-201ENSMUST00000100019 348 ntBASIC1.84□□□□□ -2.11
Chd3B1AR17 Gm25097-201ENSMUST00000104042 145 ntBASIC1.84□□□□□ -2.11
Chd3B1AR17 Gm14073-201ENSMUST00000117344 381 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms