Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Gm23048-201ENSMUST00000157237 129 ntBASIC0.72□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm24925-201ENSMUST00000178157 107 ntBASIC0.72□□□□□ -2.29
Trav4-3A0A0B4J1K1 Mir6381-201ENSMUST00000183426 87 ntBASIC0.72□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm29657-201ENSMUST00000189807 342 ntBASIC0.72□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm28437-201ENSMUST00000190277 783 ntBASIC0.72□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm29192-201ENSMUST00000190942 377 ntBASIC0.72□□□□□ -2.29
Trav4-3A0A0B4J1K1 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
Trav4-3A0A0B4J1K1 AC154296.1-201ENSMUST00000198150 67 ntBASIC0.72□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC0.72□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm44182-201ENSMUST00000204052 115 ntBASIC0.72□□□□□ -2.29
Trav4-3A0A0B4J1K1 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC0.72□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC0.72□□□□□ -2.29
Trav4-3A0A0B4J1K1 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC0.72□□□□□ -2.29
Trav4-3A0A0B4J1K1 AC163357.1-201ENSMUST00000220847 233 ntBASIC0.72□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm21937-201ENSMUST00000222825 218 ntBASIC0.72□□□□□ -2.29
Trav4-3A0A0B4J1K1 AC155314.1-201ENSMUST00000227624 508 ntBASIC0.72□□□□□ -2.29
Trav4-3A0A0B4J1K1 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm25853-201ENSMUST00000082793 132 ntBASIC0.72□□□□□ -2.29
Trav4-3A0A0B4J1K1 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC0.71□□□□□ -2.3
Trav4-3A0A0B4J1K1 Igkv13-87-201ENSMUST00000114214 286 ntBASIC0.71□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm13672-201ENSMUST00000117554 459 ntBASIC0.71□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm11268-201ENSMUST00000118347 267 ntBASIC0.71□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm12639-201ENSMUST00000121400 493 ntBASIC0.71□□□□□ -2.3
Trav4-3A0A0B4J1K1 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC0.71□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm29231-201ENSMUST00000179850 319 ntBASIC0.71□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm27419-201ENSMUST00000184576 109 ntBASIC0.71□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm9541-201ENSMUST00000188409 502 ntBASIC0.71□□□□□ -2.3
Trav4-3A0A0B4J1K1 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm8747-201ENSMUST00000195392 751 ntBASIC0.71□□□□□ -2.3
Trav4-3A0A0B4J1K1 Mir1291-201ENSMUST00000199842 117 ntBASIC0.71□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm18414-201ENSMUST00000210858 694 ntBASIC0.71□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm22723-201ENSMUST00000083820 129 ntBASIC0.71□□□□□ -2.3
Trav4-3A0A0B4J1K1 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC0.71□□□□□ -2.3
Trav4-3A0A0B4J1K1 Olfr1474-201ENSMUST00000096202 945 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
Trav4-3A0A0B4J1K1 n-R5s189-201ENSMUST00000122675 114 ntBASIC0.7□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm22217-201ENSMUST00000157556 313 ntBASIC0.7□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm24905-201ENSMUST00000158129 104 ntBASIC0.7□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm17061-201ENSMUST00000163167 499 ntBASIC0.7□□□□□ -2.3
Trav4-3A0A0B4J1K1 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
Trav4-3A0A0B4J1K1 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
Trav4-3A0A0B4J1K1 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC0.7□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm17062-201ENSMUST00000166987 461 ntBASIC0.7□□□□□ -2.3
Trav4-3A0A0B4J1K1 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC0.7□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm37219-201ENSMUST00000192036 926 ntBASIC0.7□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm7299-201ENSMUST00000194441 581 ntBASIC0.7□□□□□ -2.3
Trav4-3A0A0B4J1K1 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC0.7□□□□□ -2.3
Trav4-3A0A0B4J1K1 AC140210.1-201ENSMUST00000224961 534 ntBASIC0.7□□□□□ -2.3
Trav4-3A0A0B4J1K1 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm14910-201ENSMUST00000121037 1805 ntBASIC0.7□□□□□ -2.3
Trav4-3A0A0B4J1K1 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC0.69□□□□□ -2.3
Trav4-3A0A0B4J1K1 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm26342-201ENSMUST00000104557 129 ntBASIC0.69□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm23124-201ENSMUST00000157650 107 ntBASIC0.69□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm24177-201ENSMUST00000158927 131 ntBASIC0.69□□□□□ -2.3
Trav4-3A0A0B4J1K1 Traj60-201ENSMUST00000167781 54 ntBASIC0.69□□□□□ -2.3
Trav4-3A0A0B4J1K1 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC0.69□□□□□ -2.3
Trav4-3A0A0B4J1K1 Mir8119-201ENSMUST00000183371 129 ntBASIC0.69□□□□□ -2.3
Trav4-3A0A0B4J1K1 Mir7658-201ENSMUST00000184043 57 ntBASIC0.69□□□□□ -2.3
Trav4-3A0A0B4J1K1 Mir6997-201ENSMUST00000184313 71 ntBASIC0.69□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC0.69□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm37684-201ENSMUST00000192779 355 ntBASIC0.69□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm31511-201ENSMUST00000193134 657 ntBASIC0.69□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm38274-201ENSMUST00000195689 148 ntBASIC0.69□□□□□ -2.3
Trav4-3A0A0B4J1K1 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC0.69□□□□□ -2.3
Trav4-3A0A0B4J1K1 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC0.69□□□□□ -2.3
Trav4-3A0A0B4J1K1 AC115735.3-201ENSMUST00000227757 513 ntBASIC0.69□□□□□ -2.3
Trav4-3A0A0B4J1K1 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC0.69□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm23100-201ENSMUST00000083455 141 ntBASIC0.69□□□□□ -2.3
Trav4-3A0A0B4J1K1 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
Trav4-3A0A0B4J1K1 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC0.69□□□□□ -2.3
Trav4-3A0A0B4J1K1 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
Trav4-3A0A0B4J1K1 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC0.68□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm22674-201ENSMUST00000104413 131 ntBASIC0.68□□□□□ -2.3
Trav4-3A0A0B4J1K1 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
Trav4-3A0A0B4J1K1 Mir1195-201ENSMUST00000116818 98 ntBASIC0.68□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm11898-201ENSMUST00000117161 385 ntBASIC0.68□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm14914-201ENSMUST00000117576 2031 ntBASIC0.68□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm11429-201ENSMUST00000119089 144 ntBASIC0.68□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm15497-201ENSMUST00000119137 551 ntBASIC0.68□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm14623-201ENSMUST00000121398 603 ntBASIC0.68□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC0.68□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm16129-201ENSMUST00000152628 486 ntBASIC0.68□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm25888-201ENSMUST00000157778 302 ntBASIC0.68□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm26213-201ENSMUST00000158582 110 ntBASIC0.68□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm22131-201ENSMUST00000178415 94 ntBASIC0.68□□□□□ -2.3
Trav4-3A0A0B4J1K1 Mir6399-201ENSMUST00000184050 84 ntBASIC0.68□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm20118-201ENSMUST00000187207 162 ntBASIC0.68□□□□□ -2.3
Trav4-3A0A0B4J1K1 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm43659-201ENSMUST00000200894 628 ntBASIC0.68□□□□□ -2.3
Trav4-3A0A0B4J1K1 CT010449.1-201ENSMUST00000220624 153 ntBASIC0.68□□□□□ -2.3
Trav4-3A0A0B4J1K1 AC137902.2-201ENSMUST00000227989 576 ntBASIC0.68□□□□□ -2.3
Trav4-3A0A0B4J1K1 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC0.68□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm25560-201ENSMUST00000104606 176 ntBASIC0.67□□□□□ -2.3
Trav4-3A0A0B4J1K1 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC0.67□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm22277-201ENSMUST00000157204 277 ntBASIC0.67□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm22425-201ENSMUST00000158532 138 ntBASIC0.67□□□□□ -2.3
Trav4-3A0A0B4J1K1 Snord87-201ENSMUST00000175437 87 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms