Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Gm37778-201ENSMUST00000191732 190 ntBASIC1.48□□□□□ -2.17
Trem3Q9JKE1 Gm37000-201ENSMUST00000193058 428 ntBASIC1.48□□□□□ -2.17
Trem3Q9JKE1 Mir7215-201ENSMUST00000200383 51 ntBASIC1.48□□□□□ -2.17
Trem3Q9JKE1 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC1.48□□□□□ -2.17
Trem3Q9JKE1 Gm44578-201ENSMUST00000207236 3835 ntBASIC1.48□□□□□ -2.17
Trem3Q9JKE1 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC1.48□□□□□ -2.17
Trem3Q9JKE1 AC152979.4-201ENSMUST00000219893 379 ntBASIC1.48□□□□□ -2.17
Trem3Q9JKE1 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC1.48□□□□□ -2.17
Trem3Q9JKE1 Gm9318-201ENSMUST00000222444 438 ntBASIC1.48□□□□□ -2.17
Trem3Q9JKE1 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Trem3Q9JKE1 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
Trem3Q9JKE1 Gm25130-201ENSMUST00000082650 156 ntBASIC1.48□□□□□ -2.17
Trem3Q9JKE1 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC1.48□□□□□ -2.17
Trem3Q9JKE1 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Trem3Q9JKE1 Gm43753-201ENSMUST00000196539 3309 ntBASIC1.48□□□□□ -2.17
Trem3Q9JKE1 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Trem3Q9JKE1 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Trem3Q9JKE1 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
Trem3Q9JKE1 Gm7164-201ENSMUST00000117503 450 ntBASIC1.47□□□□□ -2.17
Trem3Q9JKE1 Snrpert-201ENSMUST00000121967 279 ntBASIC1.47□□□□□ -2.17
Trem3Q9JKE1 Gm22718-201ENSMUST00000122701 315 ntBASIC1.47□□□□□ -2.17
Trem3Q9JKE1 Gm25283-201ENSMUST00000157272 77 ntBASIC1.47□□□□□ -2.17
Trem3Q9JKE1 Gm22843-201ENSMUST00000157710 134 ntBASIC1.47□□□□□ -2.17
Trem3Q9JKE1 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC1.47□□□□□ -2.17
Trem3Q9JKE1 Gm9892-201ENSMUST00000182415 992 ntBASIC1.47□□□□□ -2.17
Trem3Q9JKE1 Mir6901-201ENSMUST00000185062 62 ntBASIC1.47□□□□□ -2.17
Trem3Q9JKE1 Gm28755-201ENSMUST00000185773 199 ntBASIC1.47□□□□□ -2.17
Trem3Q9JKE1 Gm37002-201ENSMUST00000194560 373 ntBASIC1.47□□□□□ -2.17
Trem3Q9JKE1 AC160031.2-201ENSMUST00000218242 274 ntBASIC1.47□□□□□ -2.17
Trem3Q9JKE1 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC1.47□□□□□ -2.17
Trem3Q9JKE1 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
Trem3Q9JKE1 Mir125b-2-201ENSMUST00000083538 71 ntBASIC1.47□□□□□ -2.17
Trem3Q9JKE1 Mir301-201ENSMUST00000083655 86 ntBASIC1.47□□□□□ -2.17
Trem3Q9JKE1 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Trem3Q9JKE1 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
Trem3Q9JKE1 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
Trem3Q9JKE1 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Trem3Q9JKE1 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
Trem3Q9JKE1 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC1.46□□□□□ -2.18
Trem3Q9JKE1 Gm44286-201ENSMUST00000204098 1487 ntBASIC1.46□□□□□ -2.18
Trem3Q9JKE1 Gm12941-201ENSMUST00000117934 220 ntBASIC1.46□□□□□ -2.18
Trem3Q9JKE1 Cox20-ps-201ENSMUST00000119872 353 ntBASIC1.46□□□□□ -2.18
Trem3Q9JKE1 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC1.46□□□□□ -2.18
Trem3Q9JKE1 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
Trem3Q9JKE1 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC1.46□□□□□ -2.18
Trem3Q9JKE1 Gm26487-201ENSMUST00000158022 94 ntBASIC1.46□□□□□ -2.18
Trem3Q9JKE1 Gm25658-201ENSMUST00000158472 128 ntBASIC1.46□□□□□ -2.18
Trem3Q9JKE1 Gm24572-201ENSMUST00000175505 88 ntBASIC1.46□□□□□ -2.18
Trem3Q9JKE1 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC1.46□□□□□ -2.18
Trem3Q9JKE1 Igkv1-136-201ENSMUST00000200635 297 ntBASIC1.46□□□□□ -2.18
Trem3Q9JKE1 Gm44794-201ENSMUST00000206550 411 ntBASIC1.46□□□□□ -2.18
Trem3Q9JKE1 Gm44533-201ENSMUST00000207782 268 ntBASIC1.46□□□□□ -2.18
Trem3Q9JKE1 Gm8940-201ENSMUST00000212585 219 ntBASIC1.46□□□□□ -2.18
Trem3Q9JKE1 Gm18039-201ENSMUST00000217816 728 ntBASIC1.46□□□□□ -2.18
Trem3Q9JKE1 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC1.46□□□□□ -2.18
Trem3Q9JKE1 Gm45965-201ENSMUST00000221192 1284 ntBASIC1.46□□□□□ -2.18
Trem3Q9JKE1 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC1.46□□□□□ -2.18
Trem3Q9JKE1 Gm7214-201ENSMUST00000222428 272 ntBASIC1.46□□□□□ -2.18
Trem3Q9JKE1 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Trem3Q9JKE1 Gm24165-201ENSMUST00000082718 128 ntBASIC1.46□□□□□ -2.18
Trem3Q9JKE1 Gm24151-201ENSMUST00000082758 141 ntBASIC1.46□□□□□ -2.18
Trem3Q9JKE1 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
Trem3Q9JKE1 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Trem3Q9JKE1 n-R5s200-201ENSMUST00000104194 113 ntBASIC1.45□□□□□ -2.18
Trem3Q9JKE1 Mir344e-201ENSMUST00000104677 66 ntBASIC1.45□□□□□ -2.18
Trem3Q9JKE1 Gm15986-201ENSMUST00000122153 400 ntBASIC1.45□□□□□ -2.18
Trem3Q9JKE1 Gm24908-201ENSMUST00000157294 127 ntBASIC1.45□□□□□ -2.18
Trem3Q9JKE1 Gm25637-201ENSMUST00000157529 107 ntBASIC1.45□□□□□ -2.18
Trem3Q9JKE1 Gm5277-201ENSMUST00000164923 556 ntBASIC1.45□□□□□ -2.18
Trem3Q9JKE1 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC1.45□□□□□ -2.18
Trem3Q9JKE1 Gm37550-201ENSMUST00000193230 463 ntBASIC1.45□□□□□ -2.18
Trem3Q9JKE1 Gm43431-201ENSMUST00000198577 340 ntBASIC1.45□□□□□ -2.18
Trem3Q9JKE1 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Trem3Q9JKE1 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC1.45□□□□□ -2.18
Trem3Q9JKE1 AL929285.1-201ENSMUST00000215522 229 ntBASIC1.45□□□□□ -2.18
Trem3Q9JKE1 AC164567.2-201ENSMUST00000219363 445 ntBASIC1.45□□□□□ -2.18
Trem3Q9JKE1 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Trem3Q9JKE1 Gm26128-201ENSMUST00000083170 110 ntBASIC1.45□□□□□ -2.18
Trem3Q9JKE1 Gm23727-201ENSMUST00000083352 164 ntBASIC1.45□□□□□ -2.18
Trem3Q9JKE1 Gm37903-201ENSMUST00000192122 2381 ntBASIC1.45□□□□□ -2.18
Trem3Q9JKE1 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Trem3Q9JKE1 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
Trem3Q9JKE1 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
Trem3Q9JKE1 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC1.45□□□□□ -2.18
Trem3Q9JKE1 Gm42721-201ENSMUST00000197165 1523 ntBASIC1.45□□□□□ -2.18
Trem3Q9JKE1 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC1.44□□□□□ -2.18
Trem3Q9JKE1 Gm14292-201ENSMUST00000118761 456 ntBASIC1.44□□□□□ -2.18
Trem3Q9JKE1 Gm14669-201ENSMUST00000118841 250 ntBASIC1.44□□□□□ -2.18
Trem3Q9JKE1 Gm13239-201ENSMUST00000119920 637 ntBASIC1.44□□□□□ -2.18
Trem3Q9JKE1 Gm12607-201ENSMUST00000120724 493 ntBASIC1.44□□□□□ -2.18
Trem3Q9JKE1 Gm13555-201ENSMUST00000121668 319 ntBASIC1.44□□□□□ -2.18
Trem3Q9JKE1 Gm26256-201ENSMUST00000122499 186 ntBASIC1.44□□□□□ -2.18
Trem3Q9JKE1 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC1.44□□□□□ -2.18
Trem3Q9JKE1 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC1.44□□□□□ -2.18
Trem3Q9JKE1 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC1.44□□□□□ -2.18
Trem3Q9JKE1 U6.1-201ENSMUST00000157443 101 ntBASIC1.44□□□□□ -2.18
Trem3Q9JKE1 Gm26349-201ENSMUST00000157530 130 ntBASIC1.44□□□□□ -2.18
Trem3Q9JKE1 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
Trem3Q9JKE1 Gm17162-201ENSMUST00000168538 473 ntBASIC1.44□□□□□ -2.18
Trem3Q9JKE1 Gm22392-201ENSMUST00000177971 107 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 101.2 ms