Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm45402-201ENSMUST00000211796 223 ntBASIC3.46□□□□□ -1.86
Trim54Q9ERP3 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC3.46□□□□□ -1.86
Trim54Q9ERP3 AC117656.1-201ENSMUST00000225826 339 ntBASIC3.46□□□□□ -1.86
Trim54Q9ERP3 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC3.46□□□□□ -1.86
Trim54Q9ERP3 Gm26263-201ENSMUST00000083281 164 ntBASIC3.46□□□□□ -1.86
Trim54Q9ERP3 Gm10343-201ENSMUST00000096279 348 ntBASIC3.46□□□□□ -1.86
Trim54Q9ERP3 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Trim54Q9ERP3 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Trim54Q9ERP3 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Trim54Q9ERP3 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC3.46□□□□□ -1.86
Trim54Q9ERP3 Gm42659-201ENSMUST00000196955 1754 ntBASIC3.46□□□□□ -1.86
Trim54Q9ERP3 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
Trim54Q9ERP3 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
Trim54Q9ERP3 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
Trim54Q9ERP3 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Trim54Q9ERP3 Gm25407-201ENSMUST00000104102 134 ntBASIC3.45□□□□□ -1.86
Trim54Q9ERP3 Gm15936-201ENSMUST00000118706 460 ntBASIC3.45□□□□□ -1.86
Trim54Q9ERP3 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC3.45□□□□□ -1.86
Trim54Q9ERP3 Gm12803-201ENSMUST00000118907 821 ntBASIC3.45□□□□□ -1.86
Trim54Q9ERP3 Gm20542-201ENSMUST00000174582 372 ntBASIC3.45□□□□□ -1.86
Trim54Q9ERP3 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC3.45□□□□□ -1.86
Trim54Q9ERP3 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC3.45□□□□□ -1.86
Trim54Q9ERP3 Gm21842-201ENSMUST00000177552 498 ntBASIC3.45□□□□□ -1.86
Trim54Q9ERP3 Gm21626-201ENSMUST00000177791 498 ntBASIC3.45□□□□□ -1.86
Trim54Q9ERP3 Gm21562-201ENSMUST00000177888 498 ntBASIC3.45□□□□□ -1.86
Trim54Q9ERP3 Gm21539-201ENSMUST00000177925 498 ntBASIC3.45□□□□□ -1.86
Trim54Q9ERP3 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Trim54Q9ERP3 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Trim54Q9ERP3 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Trim54Q9ERP3 Gm17522-201ENSMUST00000178144 498 ntBASIC3.45□□□□□ -1.86
Trim54Q9ERP3 Gm21599-201ENSMUST00000178249 498 ntBASIC3.45□□□□□ -1.86
Trim54Q9ERP3 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Trim54Q9ERP3 Gm21914-201ENSMUST00000178452 498 ntBASIC3.45□□□□□ -1.86
Trim54Q9ERP3 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Trim54Q9ERP3 Gm21723-201ENSMUST00000178692 498 ntBASIC3.45□□□□□ -1.86
Trim54Q9ERP3 Gm21916-201ENSMUST00000178771 498 ntBASIC3.45□□□□□ -1.86
Trim54Q9ERP3 Gm21801-201ENSMUST00000178865 498 ntBASIC3.45□□□□□ -1.86
Trim54Q9ERP3 Gm21633-201ENSMUST00000178941 498 ntBASIC3.45□□□□□ -1.86
Trim54Q9ERP3 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Trim54Q9ERP3 Gm21821-201ENSMUST00000179646 498 ntBASIC3.45□□□□□ -1.86
Trim54Q9ERP3 Gm21588-201ENSMUST00000180074 498 ntBASIC3.45□□□□□ -1.86
Trim54Q9ERP3 Gm21780-201ENSMUST00000180128 498 ntBASIC3.45□□□□□ -1.86
Trim54Q9ERP3 Gm21572-201ENSMUST00000180134 498 ntBASIC3.45□□□□□ -1.86
Trim54Q9ERP3 Gm21529-201ENSMUST00000180175 498 ntBASIC3.45□□□□□ -1.86
Trim54Q9ERP3 Gm27608-201ENSMUST00000184822 162 ntBASIC3.45□□□□□ -1.86
Trim54Q9ERP3 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.45□□□□□ -1.86
Trim54Q9ERP3 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC3.45□□□□□ -1.86
Trim54Q9ERP3 Gm29370-202ENSMUST00000187476 499 ntBASIC3.45□□□□□ -1.86
Trim54Q9ERP3 Gm18982-201ENSMUST00000198118 529 ntBASIC3.45□□□□□ -1.86
Trim54Q9ERP3 Gm43899-201ENSMUST00000203675 246 ntBASIC3.45□□□□□ -1.86
Trim54Q9ERP3 Gm7751-201ENSMUST00000212868 709 ntBASIC3.45□□□□□ -1.86
Trim54Q9ERP3 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Trim54Q9ERP3 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC3.45□□□□□ -1.86
Trim54Q9ERP3 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.45□□□□□ -1.86
Trim54Q9ERP3 AC124346.1-201ENSMUST00000218539 364 ntBASIC3.45□□□□□ -1.86
Trim54Q9ERP3 AC159203.2-201ENSMUST00000221326 193 ntBASIC3.45□□□□□ -1.86
Trim54Q9ERP3 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.45□□□□□ -1.86
Trim54Q9ERP3 AC118639.1-204ENSMUST00000226401 694 ntBASIC3.45□□□□□ -1.86
Trim54Q9ERP3 AC129541.1-201ENSMUST00000226940 523 ntBASIC3.45□□□□□ -1.86
Trim54Q9ERP3 Gm23615-201ENSMUST00000082602 65 ntBASIC3.45□□□□□ -1.86
Trim54Q9ERP3 Gm24043-201ENSMUST00000083108 116 ntBASIC3.45□□□□□ -1.86
Trim54Q9ERP3 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Trim54Q9ERP3 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.45□□□□□ -1.86
Trim54Q9ERP3 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.45□□□□□ -1.86
Trim54Q9ERP3 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Trim54Q9ERP3 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
Trim54Q9ERP3 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Trim54Q9ERP3 Gm14415-201ENSMUST00000118260 1578 ntBASIC3.44□□□□□ -1.86
Trim54Q9ERP3 Gm20172-201ENSMUST00000193138 1551 ntBASIC3.44□□□□□ -1.86
Trim54Q9ERP3 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
Trim54Q9ERP3 Gm13504-201ENSMUST00000117490 316 ntBASIC3.44□□□□□ -1.86
Trim54Q9ERP3 Gm7123-201ENSMUST00000117647 213 ntBASIC3.44□□□□□ -1.86
Trim54Q9ERP3 Gm7071-201ENSMUST00000120458 462 ntBASIC3.44□□□□□ -1.86
Trim54Q9ERP3 Gm16021-201ENSMUST00000121176 219 ntBASIC3.44□□□□□ -1.86
Trim54Q9ERP3 n-R5s216-201ENSMUST00000122755 112 ntBASIC3.44□□□□□ -1.86
Trim54Q9ERP3 Gm14562-201ENSMUST00000129885 543 ntBASIC3.44□□□□□ -1.86
Trim54Q9ERP3 Gm22225-201ENSMUST00000157358 278 ntBASIC3.44□□□□□ -1.86
Trim54Q9ERP3 Gm23668-201ENSMUST00000157465 111 ntBASIC3.44□□□□□ -1.86
Trim54Q9ERP3 Gm26088-201ENSMUST00000157896 131 ntBASIC3.44□□□□□ -1.86
Trim54Q9ERP3 Gm24418-201ENSMUST00000177597 79 ntBASIC3.44□□□□□ -1.86
Trim54Q9ERP3 Gm24639-201ENSMUST00000178518 79 ntBASIC3.44□□□□□ -1.86
Trim54Q9ERP3 Gm23076-201ENSMUST00000179082 79 ntBASIC3.44□□□□□ -1.86
Trim54Q9ERP3 Gm25077-201ENSMUST00000179157 79 ntBASIC3.44□□□□□ -1.86
Trim54Q9ERP3 Gm24264-201ENSMUST00000179835 94 ntBASIC3.44□□□□□ -1.86
Trim54Q9ERP3 Gm18486-201ENSMUST00000184040 298 ntBASIC3.44□□□□□ -1.86
Trim54Q9ERP3 Gm29134-201ENSMUST00000186579 126 ntBASIC3.44□□□□□ -1.86
Trim54Q9ERP3 Gm29429-201ENSMUST00000187071 121 ntBASIC3.44□□□□□ -1.86
Trim54Q9ERP3 Gm28337-201ENSMUST00000190425 666 ntBASIC3.44□□□□□ -1.86
Trim54Q9ERP3 Gm36866-201ENSMUST00000193343 657 ntBASIC3.44□□□□□ -1.86
Trim54Q9ERP3 Gm36047-201ENSMUST00000193659 657 ntBASIC3.44□□□□□ -1.86
Trim54Q9ERP3 Gm20857-201ENSMUST00000194766 657 ntBASIC3.44□□□□□ -1.86
Trim54Q9ERP3 Gm20858-201ENSMUST00000195459 657 ntBASIC3.44□□□□□ -1.86
Trim54Q9ERP3 Gm43955-201ENSMUST00000204332 142 ntBASIC3.44□□□□□ -1.86
Trim54Q9ERP3 Gm30674-201ENSMUST00000214523 392 ntBASIC3.44□□□□□ -1.86
Trim54Q9ERP3 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC3.44□□□□□ -1.86
Trim54Q9ERP3 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC3.44□□□□□ -1.86
Trim54Q9ERP3 AC154262.1-201ENSMUST00000225976 286 ntBASIC3.44□□□□□ -1.86
Trim54Q9ERP3 AC144628.2-201ENSMUST00000227374 352 ntBASIC3.44□□□□□ -1.86
Trim54Q9ERP3 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
Trim54Q9ERP3 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms