Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm29184-201ENSMUST00000190038 334 ntBASIC2.93□□□□□ -1.94
Smc1aQ9CU62 Gm43284-201ENSMUST00000200103 253 ntBASIC2.93□□□□□ -1.94
Smc1aQ9CU62 Gm43810-201ENSMUST00000201018 232 ntBASIC2.93□□□□□ -1.94
Smc1aQ9CU62 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC2.93□□□□□ -1.94
Smc1aQ9CU62 Gm29817-201ENSMUST00000210098 172 ntBASIC2.93□□□□□ -1.94
Smc1aQ9CU62 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC2.93□□□□□ -1.94
Smc1aQ9CU62 Gm46146-201ENSMUST00000217483 346 ntBASIC2.93□□□□□ -1.94
Smc1aQ9CU62 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.93□□□□□ -1.94
Smc1aQ9CU62 Gm5471-201ENSMUST00000072732 337 ntBASIC2.93□□□□□ -1.94
Smc1aQ9CU62 Gm23264-201ENSMUST00000083372 107 ntBASIC2.93□□□□□ -1.94
Smc1aQ9CU62 Gm25411-201ENSMUST00000083760 151 ntBASIC2.93□□□□□ -1.94
Smc1aQ9CU62 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
Smc1aQ9CU62 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
Smc1aQ9CU62 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC2.92□□□□□ -1.94
Smc1aQ9CU62 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Smc1aQ9CU62 Gm13343-201ENSMUST00000116474 105 ntBASIC2.92□□□□□ -1.94
Smc1aQ9CU62 Gm12584-201ENSMUST00000117109 1105 ntBASIC2.92□□□□□ -1.94
Smc1aQ9CU62 Gm11784-201ENSMUST00000118568 474 ntBASIC2.92□□□□□ -1.94
Smc1aQ9CU62 Gm15760-201ENSMUST00000119553 283 ntBASIC2.92□□□□□ -1.94
Smc1aQ9CU62 Gm15112-201ENSMUST00000120152 860 ntBASIC2.92□□□□□ -1.94
Smc1aQ9CU62 Gm15272-201ENSMUST00000120865 233 ntBASIC2.92□□□□□ -1.94
Smc1aQ9CU62 Gm26424-201ENSMUST00000122530 104 ntBASIC2.92□□□□□ -1.94
Smc1aQ9CU62 Gm17054-201ENSMUST00000169811 259 ntBASIC2.92□□□□□ -1.94
Smc1aQ9CU62 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC2.92□□□□□ -1.94
Smc1aQ9CU62 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC2.92□□□□□ -1.94
Smc1aQ9CU62 Gm28802-201ENSMUST00000188624 944 ntBASIC2.92□□□□□ -1.94
Smc1aQ9CU62 Gm29516-201ENSMUST00000190402 468 ntBASIC2.92□□□□□ -1.94
Smc1aQ9CU62 Gm19252-201ENSMUST00000204705 305 ntBASIC2.92□□□□□ -1.94
Smc1aQ9CU62 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC2.92□□□□□ -1.94
Smc1aQ9CU62 Gm9068-201ENSMUST00000217393 455 ntBASIC2.92□□□□□ -1.94
Smc1aQ9CU62 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC2.92□□□□□ -1.94
Smc1aQ9CU62 AC130823.2-201ENSMUST00000226169 290 ntBASIC2.92□□□□□ -1.94
Smc1aQ9CU62 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.91□□□□□ -1.94
Smc1aQ9CU62 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC2.91□□□□□ -1.94
Smc1aQ9CU62 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
Smc1aQ9CU62 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC2.91□□□□□ -1.94
Smc1aQ9CU62 Snora36b-201ENSMUST00000104383 132 ntBASIC2.91□□□□□ -1.94
Smc1aQ9CU62 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
Smc1aQ9CU62 Gm12386-201ENSMUST00000117380 688 ntBASIC2.91□□□□□ -1.94
Smc1aQ9CU62 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC2.91□□□□□ -1.94
Smc1aQ9CU62 Gm11785-201ENSMUST00000120165 601 ntBASIC2.91□□□□□ -1.94
Smc1aQ9CU62 Gm12825-201ENSMUST00000120249 563 ntBASIC2.91□□□□□ -1.94
Smc1aQ9CU62 Gm13341-201ENSMUST00000120780 672 ntBASIC2.91□□□□□ -1.94
Smc1aQ9CU62 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.91□□□□□ -1.94
Smc1aQ9CU62 Gm24517-201ENSMUST00000122560 107 ntBASIC2.91□□□□□ -1.94
Smc1aQ9CU62 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC2.91□□□□□ -1.94
Smc1aQ9CU62 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC2.91□□□□□ -1.94
Smc1aQ9CU62 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Smc1aQ9CU62 Gm24443-201ENSMUST00000157242 132 ntBASIC2.91□□□□□ -1.94
Smc1aQ9CU62 Gm24291-201ENSMUST00000157633 162 ntBASIC2.91□□□□□ -1.94
Smc1aQ9CU62 Gm22765-201ENSMUST00000158371 128 ntBASIC2.91□□□□□ -1.94
Smc1aQ9CU62 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC2.91□□□□□ -1.94
Smc1aQ9CU62 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC2.91□□□□□ -1.94
Smc1aQ9CU62 Gm24813-201ENSMUST00000175310 84 ntBASIC2.91□□□□□ -1.94
Smc1aQ9CU62 Gm28900-201ENSMUST00000185232 156 ntBASIC2.91□□□□□ -1.94
Smc1aQ9CU62 Gm42857-201ENSMUST00000200823 339 ntBASIC2.91□□□□□ -1.94
Smc1aQ9CU62 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.91□□□□□ -1.94
Smc1aQ9CU62 Gm44125-201ENSMUST00000203068 448 ntBASIC2.91□□□□□ -1.94
Smc1aQ9CU62 Gm18691-201ENSMUST00000203593 872 ntBASIC2.91□□□□□ -1.94
Smc1aQ9CU62 Gm44212-201ENSMUST00000205016 897 ntBASIC2.91□□□□□ -1.94
Smc1aQ9CU62 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC2.91□□□□□ -1.94
Smc1aQ9CU62 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC2.91□□□□□ -1.94
Smc1aQ9CU62 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Smc1aQ9CU62 Gm26206-201ENSMUST00000082908 110 ntBASIC2.91□□□□□ -1.94
Smc1aQ9CU62 Gm23516-201ENSMUST00000093728 107 ntBASIC2.91□□□□□ -1.94
Smc1aQ9CU62 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
Smc1aQ9CU62 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
Smc1aQ9CU62 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Smc1aQ9CU62 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
Smc1aQ9CU62 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.9□□□□□ -1.94
Smc1aQ9CU62 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Smc1aQ9CU62 Mir466k-201ENSMUST00000116774 122 ntBASIC2.9□□□□□ -1.95
Smc1aQ9CU62 Gm14943-201ENSMUST00000118056 546 ntBASIC2.9□□□□□ -1.95
Smc1aQ9CU62 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC2.9□□□□□ -1.95
Smc1aQ9CU62 Gm15312-201ENSMUST00000118827 271 ntBASIC2.9□□□□□ -1.95
Smc1aQ9CU62 Gm5287-201ENSMUST00000120666 598 ntBASIC2.9□□□□□ -1.95
Smc1aQ9CU62 Gm15309-201ENSMUST00000121644 240 ntBASIC2.9□□□□□ -1.95
Smc1aQ9CU62 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC2.9□□□□□ -1.95
Smc1aQ9CU62 Gm22664-201ENSMUST00000158719 105 ntBASIC2.9□□□□□ -1.95
Smc1aQ9CU62 Gm17377-201ENSMUST00000165184 207 ntBASIC2.9□□□□□ -1.95
Smc1aQ9CU62 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC2.9□□□□□ -1.95
Smc1aQ9CU62 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.9□□□□□ -1.95
Smc1aQ9CU62 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC2.9□□□□□ -1.95
Smc1aQ9CU62 Gm17946-201ENSMUST00000186856 538 ntBASIC2.9□□□□□ -1.95
Smc1aQ9CU62 Gm37946-201ENSMUST00000192064 347 ntBASIC2.9□□□□□ -1.95
Smc1aQ9CU62 Gm19694-201ENSMUST00000192364 505 ntBASIC2.9□□□□□ -1.95
Smc1aQ9CU62 Gm7871-201ENSMUST00000195346 618 ntBASIC2.9□□□□□ -1.95
Smc1aQ9CU62 Gm43669-201ENSMUST00000198229 436 ntBASIC2.9□□□□□ -1.95
Smc1aQ9CU62 Gm8041-201ENSMUST00000199755 616 ntBASIC2.9□□□□□ -1.95
Smc1aQ9CU62 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.9□□□□□ -1.95
Smc1aQ9CU62 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC2.9□□□□□ -1.95
Smc1aQ9CU62 AC121844.1-201ENSMUST00000218706 137 ntBASIC2.9□□□□□ -1.95
Smc1aQ9CU62 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC2.9□□□□□ -1.95
Smc1aQ9CU62 AC117814.1-201ENSMUST00000226135 352 ntBASIC2.9□□□□□ -1.95
Smc1aQ9CU62 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.9□□□□□ -1.95
Smc1aQ9CU62 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Smc1aQ9CU62 Mir582-201ENSMUST00000103758 81 ntBASIC2.89□□□□□ -1.95
Smc1aQ9CU62 Gm24280-201ENSMUST00000104237 134 ntBASIC2.89□□□□□ -1.95
Smc1aQ9CU62 Gm12513-201ENSMUST00000118617 352 ntBASIC2.89□□□□□ -1.95
Smc1aQ9CU62 Gm8217-201ENSMUST00000119136 465 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms