Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm24358-201ENSMUST00000158424 288 ntBASIC2.59□□□□□ -1.99
Scrt1Q99M85 Gm22434-201ENSMUST00000158549 122 ntBASIC2.59□□□□□ -1.99
Scrt1Q99M85 Gm23024-201ENSMUST00000158770 292 ntBASIC2.59□□□□□ -1.99
Scrt1Q99M85 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Scrt1Q99M85 Gm25470-201ENSMUST00000175576 111 ntBASIC2.59□□□□□ -1.99
Scrt1Q99M85 Gm22631-201ENSMUST00000179656 94 ntBASIC2.59□□□□□ -1.99
Scrt1Q99M85 Gm27718-201ENSMUST00000183721 86 ntBASIC2.59□□□□□ -1.99
Scrt1Q99M85 Gm27660-201ENSMUST00000184028 208 ntBASIC2.59□□□□□ -1.99
Scrt1Q99M85 Gm37658-201ENSMUST00000192672 315 ntBASIC2.59□□□□□ -1.99
Scrt1Q99M85 Gm37889-201ENSMUST00000194174 251 ntBASIC2.59□□□□□ -1.99
Scrt1Q99M85 Gm37404-201ENSMUST00000195726 359 ntBASIC2.59□□□□□ -1.99
Scrt1Q99M85 Gm43238-201ENSMUST00000196463 359 ntBASIC2.59□□□□□ -1.99
Scrt1Q99M85 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Scrt1Q99M85 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC2.59□□□□□ -1.99
Scrt1Q99M85 Gm29848-201ENSMUST00000203107 295 ntBASIC2.59□□□□□ -1.99
Scrt1Q99M85 Gm44149-201ENSMUST00000204256 226 ntBASIC2.59□□□□□ -1.99
Scrt1Q99M85 Gm44526-201ENSMUST00000204664 121 ntBASIC2.59□□□□□ -1.99
Scrt1Q99M85 Gm44030-201ENSMUST00000204865 432 ntBASIC2.59□□□□□ -1.99
Scrt1Q99M85 Gm45173-201ENSMUST00000206819 305 ntBASIC2.59□□□□□ -1.99
Scrt1Q99M85 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC2.59□□□□□ -1.99
Scrt1Q99M85 AC162387.1-201ENSMUST00000213369 213 ntBASIC2.59□□□□□ -1.99
Scrt1Q99M85 AL669916.3-201ENSMUST00000213855 94 ntBASIC2.59□□□□□ -1.99
Scrt1Q99M85 AL669916.6-201ENSMUST00000214610 94 ntBASIC2.59□□□□□ -1.99
Scrt1Q99M85 Gm18488-201ENSMUST00000215082 364 ntBASIC2.59□□□□□ -1.99
Scrt1Q99M85 AL669916.4-201ENSMUST00000215976 94 ntBASIC2.59□□□□□ -1.99
Scrt1Q99M85 AL669916.1-201ENSMUST00000217640 94 ntBASIC2.59□□□□□ -1.99
Scrt1Q99M85 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC2.59□□□□□ -1.99
Scrt1Q99M85 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC2.59□□□□□ -1.99
Scrt1Q99M85 AC154426.1-201ENSMUST00000225614 1132 ntBASIC2.59□□□□□ -1.99
Scrt1Q99M85 AC116656.1-201ENSMUST00000227040 755 ntBASIC2.59□□□□□ -1.99
Scrt1Q99M85 Gm10038-201ENSMUST00000077233 441 ntBASIC2.59□□□□□ -1.99
Scrt1Q99M85 BC051076-202ENSMUST00000199477 2868 ntBASIC2.59□□□□□ -1.99
Scrt1Q99M85 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC2.58□□□□□ -2
Scrt1Q99M85 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
Scrt1Q99M85 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC2.58□□□□□ -2
Scrt1Q99M85 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Scrt1Q99M85 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
Scrt1Q99M85 Mir19b-1-201ENSMUST00000102301 87 ntBASIC2.58□□□□□ -2
Scrt1Q99M85 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC2.58□□□□□ -2
Scrt1Q99M85 Gm22032-201ENSMUST00000116946 116 ntBASIC2.58□□□□□ -2
Scrt1Q99M85 Gm15399-201ENSMUST00000118055 724 ntBASIC2.58□□□□□ -2
Scrt1Q99M85 Gm11859-201ENSMUST00000118099 455 ntBASIC2.58□□□□□ -2
Scrt1Q99M85 Gm8260-201ENSMUST00000119230 353 ntBASIC2.58□□□□□ -2
Scrt1Q99M85 Gm13273-201ENSMUST00000119737 159 ntBASIC2.58□□□□□ -2
Scrt1Q99M85 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.58□□□□□ -2
Scrt1Q99M85 Gm12837-201ENSMUST00000120131 373 ntBASIC2.58□□□□□ -2
Scrt1Q99M85 Gm14678-201ENSMUST00000121396 482 ntBASIC2.58□□□□□ -2
Scrt1Q99M85 Gm14129-201ENSMUST00000122436 291 ntBASIC2.58□□□□□ -2
Scrt1Q99M85 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC2.58□□□□□ -2
Scrt1Q99M85 Gm24213-201ENSMUST00000158255 258 ntBASIC2.58□□□□□ -2
Scrt1Q99M85 Gm23312-201ENSMUST00000158774 102 ntBASIC2.58□□□□□ -2
Scrt1Q99M85 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC2.58□□□□□ -2
Scrt1Q99M85 Gm17538-201ENSMUST00000168236 327 ntBASIC2.58□□□□□ -2
Scrt1Q99M85 Ear-ps3-201ENSMUST00000168308 445 ntBASIC2.58□□□□□ -2
Scrt1Q99M85 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC2.58□□□□□ -2
Scrt1Q99M85 Mir5118-201ENSMUST00000175551 67 ntBASIC2.58□□□□□ -2
Scrt1Q99M85 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC2.58□□□□□ -2
Scrt1Q99M85 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC2.58□□□□□ -2
Scrt1Q99M85 Gm26335-201ENSMUST00000178449 107 ntBASIC2.58□□□□□ -2
Scrt1Q99M85 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC2.58□□□□□ -2
Scrt1Q99M85 Gm24306-201ENSMUST00000180229 79 ntBASIC2.58□□□□□ -2
Scrt1Q99M85 Gm27332-201ENSMUST00000184893 112 ntBASIC2.58□□□□□ -2
Scrt1Q99M85 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC2.58□□□□□ -2
Scrt1Q99M85 Gm29602-201ENSMUST00000186887 442 ntBASIC2.58□□□□□ -2
Scrt1Q99M85 Gm29365-201ENSMUST00000189461 699 ntBASIC2.58□□□□□ -2
Scrt1Q99M85 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC2.58□□□□□ -2
Scrt1Q99M85 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC2.58□□□□□ -2
Scrt1Q99M85 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC2.58□□□□□ -2
Scrt1Q99M85 Gm45232-201ENSMUST00000207811 162 ntBASIC2.58□□□□□ -2
Scrt1Q99M85 Gm45023-201ENSMUST00000207951 379 ntBASIC2.58□□□□□ -2
Scrt1Q99M85 Gm45588-201ENSMUST00000211213 630 ntBASIC2.58□□□□□ -2
Scrt1Q99M85 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Scrt1Q99M85 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC2.58□□□□□ -2
Scrt1Q99M85 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC2.58□□□□□ -2
Scrt1Q99M85 CT025689.4-201ENSMUST00000225926 601 ntBASIC2.58□□□□□ -2
Scrt1Q99M85 CT025602.1-201ENSMUST00000227281 382 ntBASIC2.58□□□□□ -2
Scrt1Q99M85 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Scrt1Q99M85 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC2.58□□□□□ -2
Scrt1Q99M85 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC2.58□□□□□ -2
Scrt1Q99M85 Gm10025-201ENSMUST00000079568 372 ntBASIC2.58□□□□□ -2
Scrt1Q99M85 Gm25079-201ENSMUST00000082529 203 ntBASIC2.58□□□□□ -2
Scrt1Q99M85 Snord38a-201ENSMUST00000083746 71 ntBASIC2.58□□□□□ -2
Scrt1Q99M85 Gm36960-201ENSMUST00000195491 2035 ntBASIC2.58□□□□□ -2
Scrt1Q99M85 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Scrt1Q99M85 Mir667-201ENSMUST00000102441 92 ntBASIC2.57□□□□□ -2
Scrt1Q99M85 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Scrt1Q99M85 Gm11367-201ENSMUST00000117802 120 ntBASIC2.57□□□□□ -2
Scrt1Q99M85 Gm14359-201ENSMUST00000118883 424 ntBASIC2.57□□□□□ -2
Scrt1Q99M85 Gm14566-201ENSMUST00000118915 321 ntBASIC2.57□□□□□ -2
Scrt1Q99M85 Gm23867-201ENSMUST00000122649 274 ntBASIC2.57□□□□□ -2
Scrt1Q99M85 Gm7582-201ENSMUST00000160831 603 ntBASIC2.57□□□□□ -2
Scrt1Q99M85 Gm7094-201ENSMUST00000178379 366 ntBASIC2.57□□□□□ -2
Scrt1Q99M85 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC2.57□□□□□ -2
Scrt1Q99M85 Mir8103-201ENSMUST00000183945 107 ntBASIC2.57□□□□□ -2
Scrt1Q99M85 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC2.57□□□□□ -2
Scrt1Q99M85 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC2.57□□□□□ -2
Scrt1Q99M85 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC2.57□□□□□ -2
Scrt1Q99M85 Gm43043-201ENSMUST00000196579 412 ntBASIC2.57□□□□□ -2
Scrt1Q99M85 Gm43407-201ENSMUST00000199816 317 ntBASIC2.57□□□□□ -2
Scrt1Q99M85 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC2.57□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms