Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm14845-201ENSMUST00000121259 306 ntBASIC4.6□□□□□ -1.67
Clp1Q99LI9 Gm8200-201ENSMUST00000122390 222 ntBASIC4.6□□□□□ -1.67
Clp1Q99LI9 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Clp1Q99LI9 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC4.6□□□□□ -1.67
Clp1Q99LI9 Gm23098-201ENSMUST00000157552 299 ntBASIC4.6□□□□□ -1.67
Clp1Q99LI9 Gm17100-201ENSMUST00000168963 272 ntBASIC4.6□□□□□ -1.67
Clp1Q99LI9 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC4.6□□□□□ -1.67
Clp1Q99LI9 Gm23355-201ENSMUST00000177614 107 ntBASIC4.6□□□□□ -1.67
Clp1Q99LI9 Gm23148-201ENSMUST00000180367 107 ntBASIC4.6□□□□□ -1.67
Clp1Q99LI9 Gm28660-201ENSMUST00000186496 253 ntBASIC4.6□□□□□ -1.67
Clp1Q99LI9 Gm28650-201ENSMUST00000188413 411 ntBASIC4.6□□□□□ -1.67
Clp1Q99LI9 AC105958.2-201ENSMUST00000214167 191 ntBASIC4.6□□□□□ -1.67
Clp1Q99LI9 CT030166.2-201ENSMUST00000222021 368 ntBASIC4.6□□□□□ -1.67
Clp1Q99LI9 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC4.6□□□□□ -1.67
Clp1Q99LI9 Gm25258-201ENSMUST00000083049 107 ntBASIC4.6□□□□□ -1.67
Clp1Q99LI9 Gm25651-201ENSMUST00000083782 119 ntBASIC4.6□□□□□ -1.67
Clp1Q99LI9 Gm26166-201ENSMUST00000083788 107 ntBASIC4.6□□□□□ -1.67
Clp1Q99LI9 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC4.6□□□□□ -1.67
Clp1Q99LI9 Gm37514-201ENSMUST00000194512 2753 ntBASIC4.6□□□□□ -1.67
Clp1Q99LI9 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Clp1Q99LI9 Gm38269-201ENSMUST00000194549 3298 ntBASIC4.6□□□□□ -1.67
Clp1Q99LI9 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
Clp1Q99LI9 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC4.59□□□□□ -1.67
Clp1Q99LI9 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Clp1Q99LI9 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC4.59□□□□□ -1.67
Clp1Q99LI9 Gm12173-201ENSMUST00000117622 273 ntBASIC4.59□□□□□ -1.67
Clp1Q99LI9 Gm11572-201ENSMUST00000119164 120 ntBASIC4.59□□□□□ -1.67
Clp1Q99LI9 Gm13729-201ENSMUST00000120328 406 ntBASIC4.59□□□□□ -1.67
Clp1Q99LI9 Gm13581-201ENSMUST00000120675 278 ntBASIC4.59□□□□□ -1.67
Clp1Q99LI9 Gm12617-201ENSMUST00000121268 381 ntBASIC4.59□□□□□ -1.67
Clp1Q99LI9 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC4.59□□□□□ -1.67
Clp1Q99LI9 Gm23901-201ENSMUST00000157570 107 ntBASIC4.59□□□□□ -1.67
Clp1Q99LI9 Gm24998-201ENSMUST00000157908 89 ntBASIC4.59□□□□□ -1.67
Clp1Q99LI9 Gm23782-201ENSMUST00000157939 120 ntBASIC4.59□□□□□ -1.67
Clp1Q99LI9 Gm22447-201ENSMUST00000158155 92 ntBASIC4.59□□□□□ -1.67
Clp1Q99LI9 Gm24636-201ENSMUST00000158673 288 ntBASIC4.59□□□□□ -1.67
Clp1Q99LI9 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC4.59□□□□□ -1.67
Clp1Q99LI9 Gm27773-201ENSMUST00000184087 78 ntBASIC4.59□□□□□ -1.67
Clp1Q99LI9 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Clp1Q99LI9 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC4.59□□□□□ -1.67
Clp1Q99LI9 Gm37417-201ENSMUST00000195257 454 ntBASIC4.59□□□□□ -1.67
Clp1Q99LI9 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC4.59□□□□□ -1.67
Clp1Q99LI9 Gm45420-201ENSMUST00000211243 425 ntBASIC4.59□□□□□ -1.67
Clp1Q99LI9 AC139750.2-201ENSMUST00000224424 386 ntBASIC4.59□□□□□ -1.67
Clp1Q99LI9 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Clp1Q99LI9 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Clp1Q99LI9 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.68
Clp1Q99LI9 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
Clp1Q99LI9 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Clp1Q99LI9 Gm20667-201ENSMUST00000175674 1930 ntBASIC4.58□□□□□ -1.68
Clp1Q99LI9 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Clp1Q99LI9 Gm38101-201ENSMUST00000193484 3557 ntBASIC4.58□□□□□ -1.68
Clp1Q99LI9 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
Clp1Q99LI9 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Clp1Q99LI9 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Clp1Q99LI9 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
Clp1Q99LI9 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Clp1Q99LI9 Gm37011-201ENSMUST00000195543 2935 ntBASIC4.58□□□□□ -1.68
Clp1Q99LI9 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Clp1Q99LI9 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Clp1Q99LI9 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Clp1Q99LI9 Gm12071-201ENSMUST00000121968 469 ntBASIC4.58□□□□□ -1.68
Clp1Q99LI9 Gm26479-201ENSMUST00000122620 106 ntBASIC4.58□□□□□ -1.68
Clp1Q99LI9 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC4.58□□□□□ -1.68
Clp1Q99LI9 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
Clp1Q99LI9 Gm20651-201ENSMUST00000177219 329 ntBASIC4.58□□□□□ -1.68
Clp1Q99LI9 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC4.58□□□□□ -1.68
Clp1Q99LI9 Gm7958-201ENSMUST00000178255 468 ntBASIC4.58□□□□□ -1.68
Clp1Q99LI9 Gm7950-201ENSMUST00000179633 468 ntBASIC4.58□□□□□ -1.68
Clp1Q99LI9 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC4.58□□□□□ -1.68
Clp1Q99LI9 Gm28849-201ENSMUST00000188127 174 ntBASIC4.58□□□□□ -1.68
Clp1Q99LI9 Gm28330-201ENSMUST00000190353 171 ntBASIC4.58□□□□□ -1.68
Clp1Q99LI9 Gm28267-201ENSMUST00000191093 265 ntBASIC4.58□□□□□ -1.68
Clp1Q99LI9 Ighv1-46-201ENSMUST00000193988 351 ntBASIC4.58□□□□□ -1.68
Clp1Q99LI9 Gm38238-201ENSMUST00000194334 346 ntBASIC4.58□□□□□ -1.68
Clp1Q99LI9 Gm44485-201ENSMUST00000199569 137 ntBASIC4.58□□□□□ -1.68
Clp1Q99LI9 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Clp1Q99LI9 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC4.58□□□□□ -1.68
Clp1Q99LI9 Gm45508-201ENSMUST00000209298 299 ntBASIC4.58□□□□□ -1.68
Clp1Q99LI9 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC4.58□□□□□ -1.68
Clp1Q99LI9 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Clp1Q99LI9 Gm23517-201ENSMUST00000082830 192 ntBASIC4.58□□□□□ -1.68
Clp1Q99LI9 Gm25202-201ENSMUST00000082838 191 ntBASIC4.58□□□□□ -1.68
Clp1Q99LI9 Gm25896-201ENSMUST00000083713 136 ntBASIC4.58□□□□□ -1.68
Clp1Q99LI9 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Clp1Q99LI9 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Clp1Q99LI9 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Clp1Q99LI9 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Clp1Q99LI9 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Clp1Q99LI9 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
Clp1Q99LI9 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Clp1Q99LI9 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Clp1Q99LI9 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Clp1Q99LI9 Mir466h-201ENSMUST00000104748 81 ntBASIC4.57□□□□□ -1.68
Clp1Q99LI9 Mir881-201ENSMUST00000104844 78 ntBASIC4.57□□□□□ -1.68
Clp1Q99LI9 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC4.57□□□□□ -1.68
Clp1Q99LI9 Gm14564-201ENSMUST00000122159 294 ntBASIC4.57□□□□□ -1.68
Clp1Q99LI9 Gm22957-201ENSMUST00000122511 123 ntBASIC4.57□□□□□ -1.68
Clp1Q99LI9 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC4.57□□□□□ -1.68
Clp1Q99LI9 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 90.3 ms