Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC4.06□□□□□ -1.76
Ushbp1Q8R370 Gm19326-201ENSMUST00000219818 326 ntBASIC4.06□□□□□ -1.76
Ushbp1Q8R370 AC159203.2-201ENSMUST00000221326 193 ntBASIC4.06□□□□□ -1.76
Ushbp1Q8R370 CT009718.4-201ENSMUST00000221881 109 ntBASIC4.06□□□□□ -1.76
Ushbp1Q8R370 AC154276.2-201ENSMUST00000227707 309 ntBASIC4.06□□□□□ -1.76
Ushbp1Q8R370 Gm24764-201ENSMUST00000083686 199 ntBASIC4.06□□□□□ -1.76
Ushbp1Q8R370 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Ushbp1Q8R370 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Ushbp1Q8R370 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Ushbp1Q8R370 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Ushbp1Q8R370 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Ushbp1Q8R370 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Ushbp1Q8R370 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC4.05□□□□□ -1.76
Ushbp1Q8R370 Gm14980-201ENSMUST00000121247 736 ntBASIC4.05□□□□□ -1.76
Ushbp1Q8R370 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC4.05□□□□□ -1.76
Ushbp1Q8R370 Gm5958-201ENSMUST00000147698 297 ntBASIC4.05□□□□□ -1.76
Ushbp1Q8R370 Gm26041-201ENSMUST00000158148 108 ntBASIC4.05□□□□□ -1.76
Ushbp1Q8R370 Gm22011-201ENSMUST00000158790 123 ntBASIC4.05□□□□□ -1.76
Ushbp1Q8R370 Gm15914-201ENSMUST00000161922 309 ntBASIC4.05□□□□□ -1.76
Ushbp1Q8R370 Mir5099-201ENSMUST00000175257 74 ntBASIC4.05□□□□□ -1.76
Ushbp1Q8R370 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC4.05□□□□□ -1.76
Ushbp1Q8R370 Gm29231-201ENSMUST00000179850 319 ntBASIC4.05□□□□□ -1.76
Ushbp1Q8R370 Gm27999-201ENSMUST00000183539 193 ntBASIC4.05□□□□□ -1.76
Ushbp1Q8R370 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC4.05□□□□□ -1.76
Ushbp1Q8R370 Mir6413-201ENSMUST00000184049 108 ntBASIC4.05□□□□□ -1.76
Ushbp1Q8R370 Gm27445-201ENSMUST00000184484 72 ntBASIC4.05□□□□□ -1.76
Ushbp1Q8R370 Mir6383-201ENSMUST00000184545 116 ntBASIC4.05□□□□□ -1.76
Ushbp1Q8R370 Gm27308-201ENSMUST00000184807 233 ntBASIC4.05□□□□□ -1.76
Ushbp1Q8R370 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC4.05□□□□□ -1.76
Ushbp1Q8R370 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC4.05□□□□□ -1.76
Ushbp1Q8R370 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC4.05□□□□□ -1.76
Ushbp1Q8R370 AC161054.1-201ENSMUST00000214319 184 ntBASIC4.05□□□□□ -1.76
Ushbp1Q8R370 AC124346.1-201ENSMUST00000218539 364 ntBASIC4.05□□□□□ -1.76
Ushbp1Q8R370 AC158803.1-201ENSMUST00000219495 316 ntBASIC4.05□□□□□ -1.76
Ushbp1Q8R370 Snord68-201ENSMUST00000082516 86 ntBASIC4.05□□□□□ -1.76
Ushbp1Q8R370 Gm22974-201ENSMUST00000083301 103 ntBASIC4.05□□□□□ -1.76
Ushbp1Q8R370 Snord15a-201ENSMUST00000083888 148 ntBASIC4.05□□□□□ -1.76
Ushbp1Q8R370 Gm14390-201ENSMUST00000117505 1695 ntBASIC4.05□□□□□ -1.76
Ushbp1Q8R370 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
Ushbp1Q8R370 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
Ushbp1Q8R370 Gm15084-201ENSMUST00000178585 1502 ntBASIC4.05□□□□□ -1.76
Ushbp1Q8R370 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
Ushbp1Q8R370 Gm21035-201ENSMUST00000207867 2608 ntBASIC4.05□□□□□ -1.76
Ushbp1Q8R370 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Ushbp1Q8R370 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Ushbp1Q8R370 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
Ushbp1Q8R370 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Ushbp1Q8R370 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Ushbp1Q8R370 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Ushbp1Q8R370 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Ushbp1Q8R370 Gm2066-201ENSMUST00000118046 389 ntBASIC4.04□□□□□ -1.76
Ushbp1Q8R370 n-R5s80-201ENSMUST00000122596 111 ntBASIC4.04□□□□□ -1.76
Ushbp1Q8R370 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC4.04□□□□□ -1.76
Ushbp1Q8R370 Gm22310-201ENSMUST00000157509 116 ntBASIC4.04□□□□□ -1.76
Ushbp1Q8R370 Gm24552-201ENSMUST00000158646 103 ntBASIC4.04□□□□□ -1.76
Ushbp1Q8R370 Gm16569-201ENSMUST00000160526 314 ntBASIC4.04□□□□□ -1.76
Ushbp1Q8R370 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC4.04□□□□□ -1.76
Ushbp1Q8R370 Gm6264-202ENSMUST00000162896 1217 ntBASIC4.04□□□□□ -1.76
Ushbp1Q8R370 Gm20399-201ENSMUST00000174652 132 ntBASIC4.04□□□□□ -1.76
Ushbp1Q8R370 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC4.04□□□□□ -1.76
Ushbp1Q8R370 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Ushbp1Q8R370 Gm26622-201ENSMUST00000180520 298 ntBASIC4.04□□□□□ -1.76
Ushbp1Q8R370 Gm27535-201ENSMUST00000183814 157 ntBASIC4.04□□□□□ -1.76
Ushbp1Q8R370 Gm29574-201ENSMUST00000186226 696 ntBASIC4.04□□□□□ -1.76
Ushbp1Q8R370 Gm28828-201ENSMUST00000186601 696 ntBASIC4.04□□□□□ -1.76
Ushbp1Q8R370 Gm28159-201ENSMUST00000190296 696 ntBASIC4.04□□□□□ -1.76
Ushbp1Q8R370 Gm37081-201ENSMUST00000192034 196 ntBASIC4.04□□□□□ -1.76
Ushbp1Q8R370 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Ushbp1Q8R370 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC4.04□□□□□ -1.76
Ushbp1Q8R370 Gm44600-201ENSMUST00000208540 111 ntBASIC4.04□□□□□ -1.76
Ushbp1Q8R370 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC4.04□□□□□ -1.76
Ushbp1Q8R370 Gm45252-201ENSMUST00000211579 397 ntBASIC4.04□□□□□ -1.76
Ushbp1Q8R370 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC4.04□□□□□ -1.76
Ushbp1Q8R370 AC166341.3-201ENSMUST00000221861 114 ntBASIC4.04□□□□□ -1.76
Ushbp1Q8R370 AC167669.1-201ENSMUST00000224932 384 ntBASIC4.04□□□□□ -1.76
Ushbp1Q8R370 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Ushbp1Q8R370 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Ushbp1Q8R370 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Ushbp1Q8R370 Gm14429-201ENSMUST00000121881 2024 ntBASIC4.04□□□□□ -1.76
Ushbp1Q8R370 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Ushbp1Q8R370 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Ushbp1Q8R370 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC4.03□□□□□ -1.76
Ushbp1Q8R370 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Ushbp1Q8R370 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Ushbp1Q8R370 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Ushbp1Q8R370 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Ushbp1Q8R370 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Ushbp1Q8R370 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
Ushbp1Q8R370 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Ushbp1Q8R370 Gm44164-201ENSMUST00000203605 2561 ntBASIC4.03□□□□□ -1.76
Ushbp1Q8R370 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Ushbp1Q8R370 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Ushbp1Q8R370 n-R5s219-201ENSMUST00000104328 132 ntBASIC4.03□□□□□ -1.76
Ushbp1Q8R370 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Ushbp1Q8R370 Gm14973-201ENSMUST00000117248 255 ntBASIC4.03□□□□□ -1.76
Ushbp1Q8R370 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC4.03□□□□□ -1.76
Ushbp1Q8R370 Gm12902-201ENSMUST00000118389 322 ntBASIC4.03□□□□□ -1.76
Ushbp1Q8R370 Gm13510-201ENSMUST00000118659 429 ntBASIC4.03□□□□□ -1.76
Ushbp1Q8R370 Gm11704-201ENSMUST00000120031 214 ntBASIC4.03□□□□□ -1.76
Ushbp1Q8R370 Gm14761-201ENSMUST00000121363 262 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms