Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC3.96□□□□□ -1.78
Vps53Q8CCB4 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Vps53Q8CCB4 Gm26145-201ENSMUST00000104476 127 ntBASIC3.96□□□□□ -1.78
Vps53Q8CCB4 Gm13122-201ENSMUST00000118380 453 ntBASIC3.96□□□□□ -1.78
Vps53Q8CCB4 Gm5762-201ENSMUST00000119204 258 ntBASIC3.96□□□□□ -1.78
Vps53Q8CCB4 Gm14768-201ENSMUST00000122126 678 ntBASIC3.96□□□□□ -1.78
Vps53Q8CCB4 Gm22479-201ENSMUST00000122566 81 ntBASIC3.96□□□□□ -1.78
Vps53Q8CCB4 Gm24627-201ENSMUST00000122764 138 ntBASIC3.96□□□□□ -1.78
Vps53Q8CCB4 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC3.96□□□□□ -1.78
Vps53Q8CCB4 Gm25967-201ENSMUST00000157168 147 ntBASIC3.96□□□□□ -1.78
Vps53Q8CCB4 Gm25982-201ENSMUST00000157920 101 ntBASIC3.96□□□□□ -1.78
Vps53Q8CCB4 Gm16569-201ENSMUST00000160526 314 ntBASIC3.96□□□□□ -1.78
Vps53Q8CCB4 Gm17148-201ENSMUST00000164702 249 ntBASIC3.96□□□□□ -1.78
Vps53Q8CCB4 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC3.96□□□□□ -1.78
Vps53Q8CCB4 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3.96□□□□□ -1.78
Vps53Q8CCB4 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC3.96□□□□□ -1.78
Vps53Q8CCB4 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC3.96□□□□□ -1.78
Vps53Q8CCB4 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC3.96□□□□□ -1.78
Vps53Q8CCB4 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC3.96□□□□□ -1.78
Vps53Q8CCB4 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC3.96□□□□□ -1.78
Vps53Q8CCB4 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC3.96□□□□□ -1.78
Vps53Q8CCB4 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC3.96□□□□□ -1.78
Vps53Q8CCB4 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC3.96□□□□□ -1.78
Vps53Q8CCB4 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Vps53Q8CCB4 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC3.96□□□□□ -1.78
Vps53Q8CCB4 Gm37568-201ENSMUST00000191755 364 ntBASIC3.96□□□□□ -1.78
Vps53Q8CCB4 Gm44274-201ENSMUST00000203417 256 ntBASIC3.96□□□□□ -1.78
Vps53Q8CCB4 AC160016.1-201ENSMUST00000215589 448 ntBASIC3.96□□□□□ -1.78
Vps53Q8CCB4 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC3.96□□□□□ -1.78
Vps53Q8CCB4 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Vps53Q8CCB4 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3.96□□□□□ -1.78
Vps53Q8CCB4 CT030187.1-201ENSMUST00000220605 252 ntBASIC3.96□□□□□ -1.78
Vps53Q8CCB4 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.96□□□□□ -1.78
Vps53Q8CCB4 AC157572.3-201ENSMUST00000227288 303 ntBASIC3.96□□□□□ -1.78
Vps53Q8CCB4 Gm24611-201ENSMUST00000083272 107 ntBASIC3.96□□□□□ -1.78
Vps53Q8CCB4 Gm3584-201ENSMUST00000173822 2565 ntBASIC3.96□□□□□ -1.78
Vps53Q8CCB4 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Vps53Q8CCB4 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
Vps53Q8CCB4 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.95□□□□□ -1.78
Vps53Q8CCB4 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
Vps53Q8CCB4 Gm11576-201ENSMUST00000117433 417 ntBASIC3.95□□□□□ -1.78
Vps53Q8CCB4 Gm13711-201ENSMUST00000119708 453 ntBASIC3.95□□□□□ -1.78
Vps53Q8CCB4 Gm22107-201ENSMUST00000122548 100 ntBASIC3.95□□□□□ -1.78
Vps53Q8CCB4 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Vps53Q8CCB4 Gm23592-201ENSMUST00000157859 117 ntBASIC3.95□□□□□ -1.78
Vps53Q8CCB4 Gm23411-201ENSMUST00000157988 62 ntBASIC3.95□□□□□ -1.78
Vps53Q8CCB4 Ear-ps12-201ENSMUST00000161720 451 ntBASIC3.95□□□□□ -1.78
Vps53Q8CCB4 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Vps53Q8CCB4 Snord116l14-201ENSMUST00000179875 94 ntBASIC3.95□□□□□ -1.78
Vps53Q8CCB4 Gm44927-201ENSMUST00000207573 716 ntBASIC3.95□□□□□ -1.78
Vps53Q8CCB4 Gm18854-201ENSMUST00000211196 329 ntBASIC3.95□□□□□ -1.78
Vps53Q8CCB4 Gm5023-201ENSMUST00000217442 587 ntBASIC3.95□□□□□ -1.78
Vps53Q8CCB4 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC3.95□□□□□ -1.78
Vps53Q8CCB4 Snord42a-201ENSMUST00000082606 65 ntBASIC3.95□□□□□ -1.78
Vps53Q8CCB4 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Vps53Q8CCB4 Gm15975-201ENSMUST00000122385 1402 ntBASIC3.95□□□□□ -1.78
Vps53Q8CCB4 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Vps53Q8CCB4 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Vps53Q8CCB4 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Vps53Q8CCB4 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Vps53Q8CCB4 Gm14868-201ENSMUST00000117840 216 ntBASIC3.94□□□□□ -1.78
Vps53Q8CCB4 Gm15231-201ENSMUST00000119174 447 ntBASIC3.94□□□□□ -1.78
Vps53Q8CCB4 Gm14638-201ENSMUST00000121338 216 ntBASIC3.94□□□□□ -1.78
Vps53Q8CCB4 Gm12858-201ENSMUST00000121913 208 ntBASIC3.94□□□□□ -1.78
Vps53Q8CCB4 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Vps53Q8CCB4 Gm22034-201ENSMUST00000157283 134 ntBASIC3.94□□□□□ -1.78
Vps53Q8CCB4 Gm22849-201ENSMUST00000157713 307 ntBASIC3.94□□□□□ -1.78
Vps53Q8CCB4 Gm22242-201ENSMUST00000175224 118 ntBASIC3.94□□□□□ -1.78
Vps53Q8CCB4 Gm28030-201ENSMUST00000184987 138 ntBASIC3.94□□□□□ -1.78
Vps53Q8CCB4 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC3.94□□□□□ -1.78
Vps53Q8CCB4 Gm28623-201ENSMUST00000187219 192 ntBASIC3.94□□□□□ -1.78
Vps53Q8CCB4 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.94□□□□□ -1.78
Vps53Q8CCB4 Gm29229-201ENSMUST00000188874 323 ntBASIC3.94□□□□□ -1.78
Vps53Q8CCB4 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC3.94□□□□□ -1.78
Vps53Q8CCB4 Mir7116-201ENSMUST00000195956 70 ntBASIC3.94□□□□□ -1.78
Vps53Q8CCB4 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC3.94□□□□□ -1.78
Vps53Q8CCB4 Gm44076-201ENSMUST00000203072 520 ntBASIC3.94□□□□□ -1.78
Vps53Q8CCB4 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC3.94□□□□□ -1.78
Vps53Q8CCB4 AC164567.2-201ENSMUST00000219363 445 ntBASIC3.94□□□□□ -1.78
Vps53Q8CCB4 Gm26055-201ENSMUST00000083038 107 ntBASIC3.94□□□□□ -1.78
Vps53Q8CCB4 Gm42448-201ENSMUST00000197122 2644 ntBASIC3.94□□□□□ -1.78
Vps53Q8CCB4 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Vps53Q8CCB4 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Vps53Q8CCB4 Gm381-201ENSMUST00000117443 2037 ntBASIC3.94□□□□□ -1.78
Vps53Q8CCB4 AC158805.1-201ENSMUST00000218197 2631 ntBASIC3.93□□□□□ -1.78
Vps53Q8CCB4 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Vps53Q8CCB4 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Vps53Q8CCB4 Gm14811-201ENSMUST00000117070 117 ntBASIC3.93□□□□□ -1.78
Vps53Q8CCB4 Gm2066-201ENSMUST00000118046 389 ntBASIC3.93□□□□□ -1.78
Vps53Q8CCB4 Gm12722-201ENSMUST00000118507 493 ntBASIC3.93□□□□□ -1.78
Vps53Q8CCB4 n-R5s192-201ENSMUST00000122577 119 ntBASIC3.93□□□□□ -1.78
Vps53Q8CCB4 Gm22791-201ENSMUST00000157232 145 ntBASIC3.93□□□□□ -1.78
Vps53Q8CCB4 Gm24780-201ENSMUST00000157635 143 ntBASIC3.93□□□□□ -1.78
Vps53Q8CCB4 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC3.93□□□□□ -1.78
Vps53Q8CCB4 Gm17117-201ENSMUST00000163665 299 ntBASIC3.93□□□□□ -1.78
Vps53Q8CCB4 Gm26430-201ENSMUST00000178054 107 ntBASIC3.93□□□□□ -1.78
Vps53Q8CCB4 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Vps53Q8CCB4 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC3.93□□□□□ -1.78
Vps53Q8CCB4 Gm28399-201ENSMUST00000186221 318 ntBASIC3.93□□□□□ -1.78
Vps53Q8CCB4 Gm28572-201ENSMUST00000187444 318 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 354.6 ms