Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm15443-201ENSMUST00000118947 820 ntBASIC1.06□□□□□ -2.24
Col6a6Q8C6K9 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC1.06□□□□□ -2.24
Col6a6Q8C6K9 Gm17062-201ENSMUST00000166987 461 ntBASIC1.06□□□□□ -2.24
Col6a6Q8C6K9 Gm27233-201ENSMUST00000184030 307 ntBASIC1.06□□□□□ -2.24
Col6a6Q8C6K9 Gm27698-201ENSMUST00000184060 249 ntBASIC1.06□□□□□ -2.24
Col6a6Q8C6K9 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC1.06□□□□□ -2.24
Col6a6Q8C6K9 Gm9632-201ENSMUST00000195934 643 ntBASIC1.06□□□□□ -2.24
Col6a6Q8C6K9 Gm46194-201ENSMUST00000218136 320 ntBASIC1.06□□□□□ -2.24
Col6a6Q8C6K9 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC1.06□□□□□ -2.24
Col6a6Q8C6K9 AC158395.1-201ENSMUST00000227206 452 ntBASIC1.06□□□□□ -2.24
Col6a6Q8C6K9 CT030662.3-201ENSMUST00000228751 476 ntBASIC1.06□□□□□ -2.24
Col6a6Q8C6K9 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC1.06□□□□□ -2.24
Col6a6Q8C6K9 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
Col6a6Q8C6K9 Gm6429-201ENSMUST00000117144 475 ntBASIC1.05□□□□□ -2.24
Col6a6Q8C6K9 Mir6238-201ENSMUST00000184140 129 ntBASIC1.05□□□□□ -2.24
Col6a6Q8C6K9 Gm28647-201ENSMUST00000188416 197 ntBASIC1.05□□□□□ -2.24
Col6a6Q8C6K9 Gm17790-201ENSMUST00000191545 1228 ntBASIC1.05□□□□□ -2.24
Col6a6Q8C6K9 Gm31532-201ENSMUST00000203555 767 ntBASIC1.05□□□□□ -2.24
Col6a6Q8C6K9 Gm8125-201ENSMUST00000216602 738 ntBASIC1.05□□□□□ -2.24
Col6a6Q8C6K9 Gm25199-201ENSMUST00000083095 104 ntBASIC1.05□□□□□ -2.24
Col6a6Q8C6K9 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
Col6a6Q8C6K9 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC1.05□□□□□ -2.24
Col6a6Q8C6K9 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
Col6a6Q8C6K9 Gm14128-201ENSMUST00000119514 1011 ntBASIC1.05□□□□□ -2.24
Col6a6Q8C6K9 Gm12155-201ENSMUST00000121267 160 ntBASIC1.05□□□□□ -2.24
Col6a6Q8C6K9 Gm16363-201ENSMUST00000132460 877 ntBASIC1.05□□□□□ -2.24
Col6a6Q8C6K9 Gm22603-201ENSMUST00000157603 96 ntBASIC1.05□□□□□ -2.24
Col6a6Q8C6K9 Gm22766-201ENSMUST00000158372 99 ntBASIC1.05□□□□□ -2.24
Col6a6Q8C6K9 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
Col6a6Q8C6K9 Gm6113-201ENSMUST00000180319 639 ntBASIC1.05□□□□□ -2.24
Col6a6Q8C6K9 Gm5224-201ENSMUST00000183060 350 ntBASIC1.05□□□□□ -2.24
Col6a6Q8C6K9 Mir6540-201ENSMUST00000184886 108 ntBASIC1.05□□□□□ -2.24
Col6a6Q8C6K9 Gm19641-201ENSMUST00000188432 417 ntBASIC1.05□□□□□ -2.24
Col6a6Q8C6K9 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC1.05□□□□□ -2.24
Col6a6Q8C6K9 Gm19280-201ENSMUST00000190191 205 ntBASIC1.05□□□□□ -2.24
Col6a6Q8C6K9 Gm37337-201ENSMUST00000192601 993 ntBASIC1.05□□□□□ -2.24
Col6a6Q8C6K9 Gm44358-201ENSMUST00000196301 98 ntBASIC1.05□□□□□ -2.24
Col6a6Q8C6K9 Gm44052-201ENSMUST00000203382 396 ntBASIC1.05□□□□□ -2.24
Col6a6Q8C6K9 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC1.05□□□□□ -2.24
Col6a6Q8C6K9 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
Col6a6Q8C6K9 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
Col6a6Q8C6K9 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
Col6a6Q8C6K9 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.04□□□□□ -2.24
Col6a6Q8C6K9 Gm26278-201ENSMUST00000157098 132 ntBASIC1.04□□□□□ -2.24
Col6a6Q8C6K9 Gm22340-201ENSMUST00000157717 114 ntBASIC1.04□□□□□ -2.24
Col6a6Q8C6K9 Gm22516-201ENSMUST00000158266 124 ntBASIC1.04□□□□□ -2.24
Col6a6Q8C6K9 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC1.04□□□□□ -2.24
Col6a6Q8C6K9 Gm22565-201ENSMUST00000175540 69 ntBASIC1.04□□□□□ -2.24
Col6a6Q8C6K9 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC1.04□□□□□ -2.24
Col6a6Q8C6K9 Gm43316-201ENSMUST00000197252 1295 ntBASIC1.04□□□□□ -2.24
Col6a6Q8C6K9 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC1.04□□□□□ -2.24
Col6a6Q8C6K9 Gm44830-201ENSMUST00000207667 584 ntBASIC1.04□□□□□ -2.24
Col6a6Q8C6K9 Gm18645-202ENSMUST00000212222 760 ntBASIC1.04□□□□□ -2.24
Col6a6Q8C6K9 AC126267.1-201ENSMUST00000214282 284 ntBASIC1.04□□□□□ -2.24
Col6a6Q8C6K9 AC142113.2-201ENSMUST00000217425 748 ntBASIC1.04□□□□□ -2.24
Col6a6Q8C6K9 Gm35558-202ENSMUST00000221819 499 ntBASIC1.04□□□□□ -2.24
Col6a6Q8C6K9 Olfr1193-201ENSMUST00000081697 957 ntBASIC1.04□□□□□ -2.24
Col6a6Q8C6K9 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC1.04□□□□□ -2.24
Col6a6Q8C6K9 Gm38281-201ENSMUST00000192301 315 ntBASIC1.04□□□□□ -2.24
Col6a6Q8C6K9 Gm37801-201ENSMUST00000194754 274 ntBASIC1.04□□□□□ -2.24
Col6a6Q8C6K9 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC1.04□□□□□ -2.24
Col6a6Q8C6K9 Gm19649-201ENSMUST00000201126 822 ntBASIC1.04□□□□□ -2.24
Col6a6Q8C6K9 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC1.04□□□□□ -2.24
Col6a6Q8C6K9 Gm3442-201ENSMUST00000216808 710 ntBASIC1.04□□□□□ -2.24
Col6a6Q8C6K9 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
Col6a6Q8C6K9 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
Col6a6Q8C6K9 Gm23850-201ENSMUST00000083830 169 ntBASIC1.04□□□□□ -2.24
Col6a6Q8C6K9 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC1.04□□□□□ -2.24
Col6a6Q8C6K9 Gm44438-201ENSMUST00000204388 3236 ntBASIC1.03□□□□□ -2.24
Col6a6Q8C6K9 Gm23705-201ENSMUST00000104370 130 ntBASIC1.03□□□□□ -2.24
Col6a6Q8C6K9 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC1.03□□□□□ -2.24
Col6a6Q8C6K9 Gm23137-201ENSMUST00000157559 107 ntBASIC1.03□□□□□ -2.24
Col6a6Q8C6K9 Gm22945-201ENSMUST00000158557 157 ntBASIC1.03□□□□□ -2.24
Col6a6Q8C6K9 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC1.03□□□□□ -2.24
Col6a6Q8C6K9 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC1.03□□□□□ -2.24
Col6a6Q8C6K9 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
Col6a6Q8C6K9 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC1.03□□□□□ -2.24
Col6a6Q8C6K9 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.03□□□□□ -2.24
Col6a6Q8C6K9 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC1.03□□□□□ -2.24
Col6a6Q8C6K9 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC1.03□□□□□ -2.24
Col6a6Q8C6K9 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC1.03□□□□□ -2.24
Col6a6Q8C6K9 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC1.03□□□□□ -2.24
Col6a6Q8C6K9 Gm23407-201ENSMUST00000082538 91 ntBASIC1.03□□□□□ -2.24
Col6a6Q8C6K9 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC1.03□□□□□ -2.25
Col6a6Q8C6K9 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC1.03□□□□□ -2.25
Col6a6Q8C6K9 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.03□□□□□ -2.25
Col6a6Q8C6K9 Gm43541-201ENSMUST00000197208 581 ntBASIC1.03□□□□□ -2.25
Col6a6Q8C6K9 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC1.03□□□□□ -2.25
Col6a6Q8C6K9 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC1.03□□□□□ -2.25
Col6a6Q8C6K9 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC1.03□□□□□ -2.25
Col6a6Q8C6K9 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.25
Col6a6Q8C6K9 Gm11284-201ENSMUST00000121910 1887 ntBASIC1.03□□□□□ -2.25
Col6a6Q8C6K9 Gm25312-201ENSMUST00000178972 107 ntBASIC1.02□□□□□ -2.25
Col6a6Q8C6K9 Gm27520-201ENSMUST00000184872 81 ntBASIC1.02□□□□□ -2.25
Col6a6Q8C6K9 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC1.02□□□□□ -2.25
Col6a6Q8C6K9 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC1.02□□□□□ -2.25
Col6a6Q8C6K9 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
Col6a6Q8C6K9 Gm45689-201ENSMUST00000210522 133 ntBASIC1.02□□□□□ -2.25
Col6a6Q8C6K9 AC163664.1-201ENSMUST00000226251 1248 ntBASIC1.02□□□□□ -2.25
Col6a6Q8C6K9 AC147545.1-201ENSMUST00000227528 108 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 95.3 ms