Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Trim56Q80VI1 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Trim56Q80VI1 Svet1-201ENSMUST00000209370 3940 ntBASIC4.64□□□□□ -1.67
Trim56Q80VI1 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC4.64□□□□□ -1.67
Trim56Q80VI1 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Trim56Q80VI1 Gm15102-201ENSMUST00000118740 1502 ntBASIC4.64□□□□□ -1.67
Trim56Q80VI1 Gm25765-201ENSMUST00000104100 132 ntBASIC4.64□□□□□ -1.67
Trim56Q80VI1 Gm11566-201ENSMUST00000118550 203 ntBASIC4.64□□□□□ -1.67
Trim56Q80VI1 Gm15760-201ENSMUST00000119553 283 ntBASIC4.64□□□□□ -1.67
Trim56Q80VI1 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Trim56Q80VI1 Gm25283-201ENSMUST00000157272 77 ntBASIC4.64□□□□□ -1.67
Trim56Q80VI1 Gm22113-201ENSMUST00000158343 104 ntBASIC4.64□□□□□ -1.67
Trim56Q80VI1 Gm25121-201ENSMUST00000179846 79 ntBASIC4.64□□□□□ -1.67
Trim56Q80VI1 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC4.64□□□□□ -1.67
Trim56Q80VI1 Gm28263-201ENSMUST00000185884 400 ntBASIC4.64□□□□□ -1.67
Trim56Q80VI1 Gm28148-201ENSMUST00000186924 697 ntBASIC4.64□□□□□ -1.67
Trim56Q80VI1 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC4.64□□□□□ -1.67
Trim56Q80VI1 Gm43441-201ENSMUST00000201458 205 ntBASIC4.64□□□□□ -1.67
Trim56Q80VI1 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Trim56Q80VI1 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC4.64□□□□□ -1.67
Trim56Q80VI1 CT009713.4-201ENSMUST00000224246 272 ntBASIC4.64□□□□□ -1.67
Trim56Q80VI1 AC133517.1-202ENSMUST00000224409 233 ntBASIC4.64□□□□□ -1.67
Trim56Q80VI1 AC166095.1-203ENSMUST00000224591 233 ntBASIC4.64□□□□□ -1.67
Trim56Q80VI1 Mir28a-201ENSMUST00000083560 86 ntBASIC4.64□□□□□ -1.67
Trim56Q80VI1 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Trim56Q80VI1 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Trim56Q80VI1 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC4.63□□□□□ -1.67
Trim56Q80VI1 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Trim56Q80VI1 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Trim56Q80VI1 Gm37478-201ENSMUST00000193624 3495 ntBASIC4.63□□□□□ -1.67
Trim56Q80VI1 Gm8995-201ENSMUST00000184842 7280 ntBASIC4.63□□□□□ -1.67
Trim56Q80VI1 Gm26418-201ENSMUST00000104275 137 ntBASIC4.63□□□□□ -1.67
Trim56Q80VI1 Gm13329-201ENSMUST00000117063 265 ntBASIC4.63□□□□□ -1.67
Trim56Q80VI1 Gm14881-201ENSMUST00000120366 372 ntBASIC4.63□□□□□ -1.67
Trim56Q80VI1 Gm14559-201ENSMUST00000121745 496 ntBASIC4.63□□□□□ -1.67
Trim56Q80VI1 Gm22482-201ENSMUST00000122563 359 ntBASIC4.63□□□□□ -1.67
Trim56Q80VI1 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC4.63□□□□□ -1.67
Trim56Q80VI1 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Trim56Q80VI1 Gm23752-201ENSMUST00000157584 115 ntBASIC4.63□□□□□ -1.67
Trim56Q80VI1 Gm27510-201ENSMUST00000158214 64 ntBASIC4.63□□□□□ -1.67
Trim56Q80VI1 Gm21816-201ENSMUST00000179255 360 ntBASIC4.63□□□□□ -1.67
Trim56Q80VI1 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC4.63□□□□□ -1.67
Trim56Q80VI1 Gm28924-201ENSMUST00000190012 241 ntBASIC4.63□□□□□ -1.67
Trim56Q80VI1 AC129308.2-201ENSMUST00000224588 789 ntBASIC4.63□□□□□ -1.67
Trim56Q80VI1 AL645546.1-201ENSMUST00000225001 189 ntBASIC4.63□□□□□ -1.67
Trim56Q80VI1 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Trim56Q80VI1 Gm23443-201ENSMUST00000082916 128 ntBASIC4.63□□□□□ -1.67
Trim56Q80VI1 Gm23041-201ENSMUST00000083868 106 ntBASIC4.63□□□□□ -1.67
Trim56Q80VI1 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Trim56Q80VI1 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
Trim56Q80VI1 AC160130.1-201ENSMUST00000220734 2735 ntBASIC4.63□□□□□ -1.67
Trim56Q80VI1 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC4.63□□□□□ -1.67
Trim56Q80VI1 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
Trim56Q80VI1 Gm43663-201ENSMUST00000198643 1505 ntBASIC4.62□□□□□ -1.67
Trim56Q80VI1 AC140397.1-201ENSMUST00000225563 4562 ntBASIC4.62□□□□□ -1.67
Trim56Q80VI1 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Trim56Q80VI1 Gm37045-201ENSMUST00000192016 2463 ntBASIC4.62□□□□□ -1.67
Trim56Q80VI1 Gm45557-201ENSMUST00000210004 1651 ntBASIC4.62□□□□□ -1.67
Trim56Q80VI1 Gm14537-201ENSMUST00000117464 599 ntBASIC4.62□□□□□ -1.67
Trim56Q80VI1 Gm14581-201ENSMUST00000121726 198 ntBASIC4.62□□□□□ -1.67
Trim56Q80VI1 Gm24675-201ENSMUST00000158757 259 ntBASIC4.62□□□□□ -1.67
Trim56Q80VI1 Gm2389-201ENSMUST00000160487 189 ntBASIC4.62□□□□□ -1.67
Trim56Q80VI1 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Trim56Q80VI1 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC4.62□□□□□ -1.67
Trim56Q80VI1 Gm7497-201ENSMUST00000183064 1003 ntBASIC4.62□□□□□ -1.67
Trim56Q80VI1 Mir8106-201ENSMUST00000184520 139 ntBASIC4.62□□□□□ -1.67
Trim56Q80VI1 Gm29320-201ENSMUST00000185235 615 ntBASIC4.62□□□□□ -1.67
Trim56Q80VI1 Gm28339-201ENSMUST00000185845 696 ntBASIC4.62□□□□□ -1.67
Trim56Q80VI1 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC4.62□□□□□ -1.67
Trim56Q80VI1 Gm29179-202ENSMUST00000186138 615 ntBASIC4.62□□□□□ -1.67
Trim56Q80VI1 Gm28598-201ENSMUST00000186490 615 ntBASIC4.62□□□□□ -1.67
Trim56Q80VI1 Gm28057-201ENSMUST00000186603 615 ntBASIC4.62□□□□□ -1.67
Trim56Q80VI1 Gm29448-201ENSMUST00000186675 615 ntBASIC4.62□□□□□ -1.67
Trim56Q80VI1 Gm29314-201ENSMUST00000186800 615 ntBASIC4.62□□□□□ -1.67
Trim56Q80VI1 Gm28253-202ENSMUST00000187971 615 ntBASIC4.62□□□□□ -1.67
Trim56Q80VI1 Gm28896-201ENSMUST00000188609 696 ntBASIC4.62□□□□□ -1.67
Trim56Q80VI1 Gm29268-201ENSMUST00000188669 615 ntBASIC4.62□□□□□ -1.67
Trim56Q80VI1 Gm29169-201ENSMUST00000189835 615 ntBASIC4.62□□□□□ -1.67
Trim56Q80VI1 Gm28978-201ENSMUST00000191120 615 ntBASIC4.62□□□□□ -1.67
Trim56Q80VI1 Gm37172-201ENSMUST00000191926 615 ntBASIC4.62□□□□□ -1.67
Trim56Q80VI1 Gm37001-201ENSMUST00000193377 190 ntBASIC4.62□□□□□ -1.67
Trim56Q80VI1 Gm38107-201ENSMUST00000194873 696 ntBASIC4.62□□□□□ -1.67
Trim56Q80VI1 Gm44385-201ENSMUST00000198781 81 ntBASIC4.62□□□□□ -1.67
Trim56Q80VI1 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC4.62□□□□□ -1.67
Trim56Q80VI1 AC125374.2-201ENSMUST00000214278 162 ntBASIC4.62□□□□□ -1.67
Trim56Q80VI1 Gm8942-201ENSMUST00000217892 400 ntBASIC4.62□□□□□ -1.67
Trim56Q80VI1 AC158523.1-201ENSMUST00000221398 328 ntBASIC4.62□□□□□ -1.67
Trim56Q80VI1 LOC667541-201ENSMUST00000223408 278 ntBASIC4.62□□□□□ -1.67
Trim56Q80VI1 Gm23518-201ENSMUST00000082835 153 ntBASIC4.62□□□□□ -1.67
Trim56Q80VI1 Gm25411-201ENSMUST00000083760 151 ntBASIC4.62□□□□□ -1.67
Trim56Q80VI1 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
Trim56Q80VI1 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Trim56Q80VI1 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Trim56Q80VI1 Gm36989-201ENSMUST00000193225 2160 ntBASIC4.61□□□□□ -1.67
Trim56Q80VI1 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
Trim56Q80VI1 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Trim56Q80VI1 Gm25169-201ENSMUST00000104190 129 ntBASIC4.61□□□□□ -1.67
Trim56Q80VI1 Gm26476-201ENSMUST00000122618 313 ntBASIC4.61□□□□□ -1.67
Trim56Q80VI1 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC4.61□□□□□ -1.67
Trim56Q80VI1 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC4.61□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 128.9 ms