Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm14037-201ENSMUST00000120576 313 ntBASIC4.34□□□□□ -1.71
Sh3rf1Q69ZI1 n-R5s45-201ENSMUST00000122592 110 ntBASIC4.34□□□□□ -1.71
Sh3rf1Q69ZI1 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC4.34□□□□□ -1.71
Sh3rf1Q69ZI1 Gm22118-201ENSMUST00000175593 171 ntBASIC4.34□□□□□ -1.71
Sh3rf1Q69ZI1 Gm25473-201ENSMUST00000180191 107 ntBASIC4.34□□□□□ -1.71
Sh3rf1Q69ZI1 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC4.34□□□□□ -1.71
Sh3rf1Q69ZI1 Gm28500-201ENSMUST00000190286 151 ntBASIC4.34□□□□□ -1.71
Sh3rf1Q69ZI1 Gm42578-201ENSMUST00000199960 194 ntBASIC4.34□□□□□ -1.71
Sh3rf1Q69ZI1 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC4.34□□□□□ -1.71
Sh3rf1Q69ZI1 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC4.34□□□□□ -1.71
Sh3rf1Q69ZI1 Gm44650-201ENSMUST00000206929 194 ntBASIC4.34□□□□□ -1.71
Sh3rf1Q69ZI1 Gm45513-201ENSMUST00000210228 376 ntBASIC4.34□□□□□ -1.71
Sh3rf1Q69ZI1 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC4.34□□□□□ -1.71
Sh3rf1Q69ZI1 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Sh3rf1Q69ZI1 Gm23928-201ENSMUST00000082469 145 ntBASIC4.34□□□□□ -1.71
Sh3rf1Q69ZI1 Gm23099-201ENSMUST00000083454 139 ntBASIC4.34□□□□□ -1.71
Sh3rf1Q69ZI1 Mir28a-201ENSMUST00000083560 86 ntBASIC4.34□□□□□ -1.71
Sh3rf1Q69ZI1 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
Sh3rf1Q69ZI1 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC4.34□□□□□ -1.72
Sh3rf1Q69ZI1 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Sh3rf1Q69ZI1 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
Sh3rf1Q69ZI1 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Sh3rf1Q69ZI1 Gm3623-201ENSMUST00000173643 2747 ntBASIC4.33□□□□□ -1.72
Sh3rf1Q69ZI1 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Sh3rf1Q69ZI1 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC4.33□□□□□ -1.72
Sh3rf1Q69ZI1 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
Sh3rf1Q69ZI1 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Sh3rf1Q69ZI1 Gm23887-201ENSMUST00000122683 172 ntBASIC4.33□□□□□ -1.72
Sh3rf1Q69ZI1 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC4.33□□□□□ -1.72
Sh3rf1Q69ZI1 Gm25621-201ENSMUST00000157223 114 ntBASIC4.33□□□□□ -1.72
Sh3rf1Q69ZI1 Gm22211-201ENSMUST00000158097 156 ntBASIC4.33□□□□□ -1.72
Sh3rf1Q69ZI1 Gm22537-201ENSMUST00000158172 199 ntBASIC4.33□□□□□ -1.72
Sh3rf1Q69ZI1 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC4.33□□□□□ -1.72
Sh3rf1Q69ZI1 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC4.33□□□□□ -1.72
Sh3rf1Q69ZI1 Mir6907-201ENSMUST00000183764 71 ntBASIC4.33□□□□□ -1.72
Sh3rf1Q69ZI1 Gm44076-201ENSMUST00000203072 520 ntBASIC4.33□□□□□ -1.72
Sh3rf1Q69ZI1 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Sh3rf1Q69ZI1 Gm45392-201ENSMUST00000210441 214 ntBASIC4.33□□□□□ -1.72
Sh3rf1Q69ZI1 Gm6842-201ENSMUST00000211361 390 ntBASIC4.33□□□□□ -1.72
Sh3rf1Q69ZI1 Gm45273-201ENSMUST00000211559 281 ntBASIC4.33□□□□□ -1.72
Sh3rf1Q69ZI1 AC158395.1-201ENSMUST00000227206 452 ntBASIC4.33□□□□□ -1.72
Sh3rf1Q69ZI1 Gm25078-201ENSMUST00000082530 107 ntBASIC4.33□□□□□ -1.72
Sh3rf1Q69ZI1 Gm22061-201ENSMUST00000082557 107 ntBASIC4.33□□□□□ -1.72
Sh3rf1Q69ZI1 Snord82-201ENSMUST00000082889 70 ntBASIC4.33□□□□□ -1.72
Sh3rf1Q69ZI1 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Sh3rf1Q69ZI1 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Sh3rf1Q69ZI1 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Sh3rf1Q69ZI1 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC4.33□□□□□ -1.72
Sh3rf1Q69ZI1 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
Sh3rf1Q69ZI1 Gm42486-201ENSMUST00000200369 3486 ntBASIC4.33□□□□□ -1.72
Sh3rf1Q69ZI1 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC4.33□□□□□ -1.72
Sh3rf1Q69ZI1 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Sh3rf1Q69ZI1 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
Sh3rf1Q69ZI1 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Sh3rf1Q69ZI1 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Sh3rf1Q69ZI1 Gm42528-201ENSMUST00000200697 3418 ntBASIC4.32□□□□□ -1.72
Sh3rf1Q69ZI1 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.32□□□□□ -1.72
Sh3rf1Q69ZI1 Gm36989-201ENSMUST00000193225 2160 ntBASIC4.32□□□□□ -1.72
Sh3rf1Q69ZI1 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Sh3rf1Q69ZI1 Gm11506-201ENSMUST00000122414 470 ntBASIC4.32□□□□□ -1.72
Sh3rf1Q69ZI1 Gm22613-201ENSMUST00000122679 292 ntBASIC4.32□□□□□ -1.72
Sh3rf1Q69ZI1 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC4.32□□□□□ -1.72
Sh3rf1Q69ZI1 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Sh3rf1Q69ZI1 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC4.32□□□□□ -1.72
Sh3rf1Q69ZI1 Gm25599-201ENSMUST00000157816 103 ntBASIC4.32□□□□□ -1.72
Sh3rf1Q69ZI1 Gm24898-201ENSMUST00000158133 106 ntBASIC4.32□□□□□ -1.72
Sh3rf1Q69ZI1 Gm24006-201ENSMUST00000158462 132 ntBASIC4.32□□□□□ -1.72
Sh3rf1Q69ZI1 Gm20542-201ENSMUST00000174582 372 ntBASIC4.32□□□□□ -1.72
Sh3rf1Q69ZI1 Gm23355-201ENSMUST00000177614 107 ntBASIC4.32□□□□□ -1.72
Sh3rf1Q69ZI1 Gm23148-201ENSMUST00000180367 107 ntBASIC4.32□□□□□ -1.72
Sh3rf1Q69ZI1 Gm28924-201ENSMUST00000190012 241 ntBASIC4.32□□□□□ -1.72
Sh3rf1Q69ZI1 Gm6615-201ENSMUST00000199426 631 ntBASIC4.32□□□□□ -1.72
Sh3rf1Q69ZI1 Gm36189-201ENSMUST00000204113 523 ntBASIC4.32□□□□□ -1.72
Sh3rf1Q69ZI1 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC4.32□□□□□ -1.72
Sh3rf1Q69ZI1 AC154241.1-201ENSMUST00000223952 356 ntBASIC4.32□□□□□ -1.72
Sh3rf1Q69ZI1 Gm25815-201ENSMUST00000082755 107 ntBASIC4.32□□□□□ -1.72
Sh3rf1Q69ZI1 Gm22685-201ENSMUST00000082848 106 ntBASIC4.32□□□□□ -1.72
Sh3rf1Q69ZI1 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC4.32□□□□□ -1.72
Sh3rf1Q69ZI1 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Sh3rf1Q69ZI1 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC4.32□□□□□ -1.72
Sh3rf1Q69ZI1 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
Sh3rf1Q69ZI1 Gm38010-201ENSMUST00000192592 2784 ntBASIC4.32□□□□□ -1.72
Sh3rf1Q69ZI1 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Sh3rf1Q69ZI1 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
Sh3rf1Q69ZI1 AC153150.1-201ENSMUST00000226065 3782 ntBASIC4.31□□□□□ -1.72
Sh3rf1Q69ZI1 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Sh3rf1Q69ZI1 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Sh3rf1Q69ZI1 Gm23481-201ENSMUST00000104173 131 ntBASIC4.31□□□□□ -1.72
Sh3rf1Q69ZI1 Gm12797-201ENSMUST00000118645 273 ntBASIC4.31□□□□□ -1.72
Sh3rf1Q69ZI1 Gm6829-201ENSMUST00000119858 360 ntBASIC4.31□□□□□ -1.72
Sh3rf1Q69ZI1 Gm13557-201ENSMUST00000120771 382 ntBASIC4.31□□□□□ -1.72
Sh3rf1Q69ZI1 Gm24594-201ENSMUST00000122502 99 ntBASIC4.31□□□□□ -1.72
Sh3rf1Q69ZI1 Gm16303-201ENSMUST00000161498 390 ntBASIC4.31□□□□□ -1.72
Sh3rf1Q69ZI1 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC4.31□□□□□ -1.72
Sh3rf1Q69ZI1 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC4.31□□□□□ -1.72
Sh3rf1Q69ZI1 Gm29320-201ENSMUST00000185235 615 ntBASIC4.31□□□□□ -1.72
Sh3rf1Q69ZI1 Gm29179-202ENSMUST00000186138 615 ntBASIC4.31□□□□□ -1.72
Sh3rf1Q69ZI1 Gm29448-201ENSMUST00000186675 615 ntBASIC4.31□□□□□ -1.72
Sh3rf1Q69ZI1 Gm29314-201ENSMUST00000186800 615 ntBASIC4.31□□□□□ -1.72
Sh3rf1Q69ZI1 Gm28253-202ENSMUST00000187971 615 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 93.2 ms