Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Trim28Q62318 Gm21916-201ENSMUST00000178771 498 ntBASIC4.31□□□□□ -1.72
Trim28Q62318 Gm21801-201ENSMUST00000178865 498 ntBASIC4.31□□□□□ -1.72
Trim28Q62318 Gm21633-201ENSMUST00000178941 498 ntBASIC4.31□□□□□ -1.72
Trim28Q62318 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Trim28Q62318 Gm21821-201ENSMUST00000179646 498 ntBASIC4.31□□□□□ -1.72
Trim28Q62318 Gm21588-201ENSMUST00000180074 498 ntBASIC4.31□□□□□ -1.72
Trim28Q62318 Gm21780-201ENSMUST00000180128 498 ntBASIC4.31□□□□□ -1.72
Trim28Q62318 Gm21572-201ENSMUST00000180134 498 ntBASIC4.31□□□□□ -1.72
Trim28Q62318 Gm21529-201ENSMUST00000180175 498 ntBASIC4.31□□□□□ -1.72
Trim28Q62318 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Trim28Q62318 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC4.31□□□□□ -1.72
Trim28Q62318 Gm29370-202ENSMUST00000187476 499 ntBASIC4.31□□□□□ -1.72
Trim28Q62318 Gm29262-201ENSMUST00000190084 196 ntBASIC4.31□□□□□ -1.72
Trim28Q62318 Gm43739-201ENSMUST00000198294 307 ntBASIC4.31□□□□□ -1.72
Trim28Q62318 Crs-ps-201ENSMUST00000203723 760 ntBASIC4.31□□□□□ -1.72
Trim28Q62318 Gm6012-201ENSMUST00000210821 730 ntBASIC4.31□□□□□ -1.72
Trim28Q62318 Gm18854-201ENSMUST00000211196 329 ntBASIC4.31□□□□□ -1.72
Trim28Q62318 Gm9068-201ENSMUST00000217393 455 ntBASIC4.31□□□□□ -1.72
Trim28Q62318 AC160863.1-201ENSMUST00000218412 317 ntBASIC4.31□□□□□ -1.72
Trim28Q62318 AC163033.1-201ENSMUST00000218608 157 ntBASIC4.31□□□□□ -1.72
Trim28Q62318 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC4.31□□□□□ -1.72
Trim28Q62318 AC098719.1-201ENSMUST00000228920 371 ntBASIC4.31□□□□□ -1.72
Trim28Q62318 Gm26129-201ENSMUST00000082719 107 ntBASIC4.31□□□□□ -1.72
Trim28Q62318 Gm25792-201ENSMUST00000083289 100 ntBASIC4.31□□□□□ -1.72
Trim28Q62318 Gm23451-201ENSMUST00000083328 122 ntBASIC4.31□□□□□ -1.72
Trim28Q62318 Mir128-1-201ENSMUST00000083586 70 ntBASIC4.31□□□□□ -1.72
Trim28Q62318 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Trim28Q62318 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Trim28Q62318 Gm14421-201ENSMUST00000121755 1958 ntBASIC4.31□□□□□ -1.72
Trim28Q62318 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC4.3□□□□□ -1.72
Trim28Q62318 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC4.3□□□□□ -1.72
Trim28Q62318 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC4.3□□□□□ -1.72
Trim28Q62318 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
Trim28Q62318 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Trim28Q62318 Gm12806-201ENSMUST00000119384 268 ntBASIC4.3□□□□□ -1.72
Trim28Q62318 Gm12686-201ENSMUST00000120546 397 ntBASIC4.3□□□□□ -1.72
Trim28Q62318 Gm12412-201ENSMUST00000121867 328 ntBASIC4.3□□□□□ -1.72
Trim28Q62318 Gm23213-201ENSMUST00000122715 313 ntBASIC4.3□□□□□ -1.72
Trim28Q62318 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Trim28Q62318 Gm25643-201ENSMUST00000158874 103 ntBASIC4.3□□□□□ -1.72
Trim28Q62318 Mir5624-201ENSMUST00000176635 61 ntBASIC4.3□□□□□ -1.72
Trim28Q62318 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC4.3□□□□□ -1.72
Trim28Q62318 Gm22307-201ENSMUST00000180019 107 ntBASIC4.3□□□□□ -1.72
Trim28Q62318 Mir6382-201ENSMUST00000184055 110 ntBASIC4.3□□□□□ -1.72
Trim28Q62318 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC4.3□□□□□ -1.72
Trim28Q62318 Gm29147-201ENSMUST00000186846 315 ntBASIC4.3□□□□□ -1.72
Trim28Q62318 Gm28160-201ENSMUST00000191229 315 ntBASIC4.3□□□□□ -1.72
Trim28Q62318 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC4.3□□□□□ -1.72
Trim28Q62318 Gm43804-201ENSMUST00000198280 456 ntBASIC4.3□□□□□ -1.72
Trim28Q62318 Mir7227-201ENSMUST00000200408 59 ntBASIC4.3□□□□□ -1.72
Trim28Q62318 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC4.3□□□□□ -1.72
Trim28Q62318 Gm44964-201ENSMUST00000207011 273 ntBASIC4.3□□□□□ -1.72
Trim28Q62318 AC239878.1-201ENSMUST00000224212 506 ntBASIC4.3□□□□□ -1.72
Trim28Q62318 AC157772.2-201ENSMUST00000228202 259 ntBASIC4.3□□□□□ -1.72
Trim28Q62318 Gm11284-201ENSMUST00000121910 1887 ntBASIC4.3□□□□□ -1.72
Trim28Q62318 Gm8675-201ENSMUST00000201408 1856 ntBASIC4.3□□□□□ -1.72
Trim28Q62318 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Trim28Q62318 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
Trim28Q62318 Gm43658-201ENSMUST00000202348 4176 ntBASIC4.29□□□□□ -1.72
Trim28Q62318 Gm44078-201ENSMUST00000204652 2646 ntBASIC4.29□□□□□ -1.72
Trim28Q62318 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC4.29□□□□□ -1.72
Trim28Q62318 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC4.29□□□□□ -1.72
Trim28Q62318 Gm26423-201ENSMUST00000104277 128 ntBASIC4.29□□□□□ -1.72
Trim28Q62318 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Trim28Q62318 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Trim28Q62318 Gm14669-201ENSMUST00000118841 250 ntBASIC4.29□□□□□ -1.72
Trim28Q62318 Gm23791-201ENSMUST00000122553 293 ntBASIC4.29□□□□□ -1.72
Trim28Q62318 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Trim28Q62318 Gm27893-201ENSMUST00000184408 194 ntBASIC4.29□□□□□ -1.72
Trim28Q62318 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC4.29□□□□□ -1.72
Trim28Q62318 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Trim28Q62318 Gm37757-201ENSMUST00000193072 210 ntBASIC4.29□□□□□ -1.72
Trim28Q62318 Gm18384-201ENSMUST00000195974 808 ntBASIC4.29□□□□□ -1.72
Trim28Q62318 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC4.29□□□□□ -1.72
Trim28Q62318 AC093926.1-201ENSMUST00000213730 243 ntBASIC4.29□□□□□ -1.72
Trim28Q62318 AC154224.1-201ENSMUST00000224367 403 ntBASIC4.29□□□□□ -1.72
Trim28Q62318 AC107757.3-201ENSMUST00000226312 535 ntBASIC4.29□□□□□ -1.72
Trim28Q62318 CT009510.2-203ENSMUST00000226704 2136 ntBASIC4.29□□□□□ -1.72
Trim28Q62318 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Trim28Q62318 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Trim28Q62318 Gm10242-201ENSMUST00000090064 330 ntBASIC4.29□□□□□ -1.72
Trim28Q62318 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Trim28Q62318 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Trim28Q62318 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
Trim28Q62318 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC4.28□□□□□ -1.72
Trim28Q62318 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Trim28Q62318 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Trim28Q62318 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
Trim28Q62318 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC4.28□□□□□ -1.72
Trim28Q62318 Gm24584-201ENSMUST00000157972 107 ntBASIC4.28□□□□□ -1.72
Trim28Q62318 Gm25555-201ENSMUST00000158078 111 ntBASIC4.28□□□□□ -1.72
Trim28Q62318 Gm25066-201ENSMUST00000158145 123 ntBASIC4.28□□□□□ -1.72
Trim28Q62318 Gm24730-201ENSMUST00000158228 117 ntBASIC4.28□□□□□ -1.72
Trim28Q62318 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC4.28□□□□□ -1.72
Trim28Q62318 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Trim28Q62318 Gm22286-201ENSMUST00000179708 107 ntBASIC4.28□□□□□ -1.72
Trim28Q62318 Gm25156-201ENSMUST00000179809 79 ntBASIC4.28□□□□□ -1.72
Trim28Q62318 Gm27718-201ENSMUST00000183721 86 ntBASIC4.28□□□□□ -1.72
Trim28Q62318 Gm28744-201ENSMUST00000189939 340 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 153.4 ms