Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Gm24897-201ENSMUST00000179033 107 ntBASIC2.37□□□□□ -2.03
Usf1Q61069 Gm26585-201ENSMUST00000180890 630 ntBASIC2.37□□□□□ -2.03
Usf1Q61069 Mir6402-201ENSMUST00000183406 80 ntBASIC2.37□□□□□ -2.03
Usf1Q61069 Gm30341-201ENSMUST00000194363 289 ntBASIC2.37□□□□□ -2.03
Usf1Q61069 Gm37709-201ENSMUST00000195074 600 ntBASIC2.37□□□□□ -2.03
Usf1Q61069 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC2.37□□□□□ -2.03
Usf1Q61069 Gm8041-201ENSMUST00000199755 616 ntBASIC2.37□□□□□ -2.03
Usf1Q61069 Gm43810-201ENSMUST00000201018 232 ntBASIC2.37□□□□□ -2.03
Usf1Q61069 Gm43600-201ENSMUST00000202134 223 ntBASIC2.37□□□□□ -2.03
Usf1Q61069 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC2.37□□□□□ -2.03
Usf1Q61069 AC153968.2-201ENSMUST00000215579 1140 ntBASIC2.37□□□□□ -2.03
Usf1Q61069 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC2.37□□□□□ -2.03
Usf1Q61069 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC2.37□□□□□ -2.03
Usf1Q61069 AC192616.3-201ENSMUST00000220797 1124 ntBASIC2.37□□□□□ -2.03
Usf1Q61069 AC123860.1-201ENSMUST00000228033 481 ntBASIC2.37□□□□□ -2.03
Usf1Q61069 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Usf1Q61069 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Usf1Q61069 Gm26206-201ENSMUST00000082908 110 ntBASIC2.37□□□□□ -2.03
Usf1Q61069 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC2.37□□□□□ -2.03
Usf1Q61069 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Usf1Q61069 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Usf1Q61069 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Usf1Q61069 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Usf1Q61069 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Usf1Q61069 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.36□□□□□ -2.03
Usf1Q61069 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
Usf1Q61069 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Usf1Q61069 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC2.36□□□□□ -2.03
Usf1Q61069 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC2.36□□□□□ -2.03
Usf1Q61069 Gm11438-201ENSMUST00000121582 189 ntBASIC2.36□□□□□ -2.03
Usf1Q61069 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Usf1Q61069 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
Usf1Q61069 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Usf1Q61069 Gm18358-201ENSMUST00000173179 1277 ntBASIC2.36□□□□□ -2.03
Usf1Q61069 Mir8103-201ENSMUST00000183945 107 ntBASIC2.36□□□□□ -2.03
Usf1Q61069 Gm27470-201ENSMUST00000184070 210 ntBASIC2.36□□□□□ -2.03
Usf1Q61069 Gm28779-201ENSMUST00000189678 323 ntBASIC2.36□□□□□ -2.03
Usf1Q61069 Gm38154-201ENSMUST00000195444 340 ntBASIC2.36□□□□□ -2.03
Usf1Q61069 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC2.36□□□□□ -2.03
Usf1Q61069 Gm43804-201ENSMUST00000198280 456 ntBASIC2.36□□□□□ -2.03
Usf1Q61069 Gm43991-201ENSMUST00000203751 274 ntBASIC2.36□□□□□ -2.03
Usf1Q61069 AC101984.1-201ENSMUST00000219639 402 ntBASIC2.36□□□□□ -2.03
Usf1Q61069 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Usf1Q61069 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC2.36□□□□□ -2.03
Usf1Q61069 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Usf1Q61069 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Usf1Q61069 AC154576.2-202ENSMUST00000223916 688 ntBASIC2.36□□□□□ -2.03
Usf1Q61069 AC115289.1-201ENSMUST00000224915 522 ntBASIC2.36□□□□□ -2.03
Usf1Q61069 AC115735.1-201ENSMUST00000226633 350 ntBASIC2.36□□□□□ -2.03
Usf1Q61069 AC116656.1-201ENSMUST00000227040 755 ntBASIC2.36□□□□□ -2.03
Usf1Q61069 AC144628.1-201ENSMUST00000227943 466 ntBASIC2.36□□□□□ -2.03
Usf1Q61069 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Usf1Q61069 Gm23723-201ENSMUST00000082996 132 ntBASIC2.36□□□□□ -2.03
Usf1Q61069 Gm23645-201ENSMUST00000083228 108 ntBASIC2.36□□□□□ -2.03
Usf1Q61069 Mir208a-201ENSMUST00000083498 83 ntBASIC2.36□□□□□ -2.03
Usf1Q61069 Mir137-201ENSMUST00000083635 73 ntBASIC2.36□□□□□ -2.03
Usf1Q61069 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Usf1Q61069 Gm37515-201ENSMUST00000193321 3817 ntBASIC2.36□□□□□ -2.03
Usf1Q61069 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC2.35□□□□□ -2.03
Usf1Q61069 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
Usf1Q61069 Gm25088-201ENSMUST00000101803 79 ntBASIC2.35□□□□□ -2.03
Usf1Q61069 Snord14c-201ENSMUST00000101927 86 ntBASIC2.35□□□□□ -2.03
Usf1Q61069 Gm24430-201ENSMUST00000104077 104 ntBASIC2.35□□□□□ -2.03
Usf1Q61069 Gm14868-201ENSMUST00000117840 216 ntBASIC2.35□□□□□ -2.03
Usf1Q61069 Gm14940-201ENSMUST00000119309 495 ntBASIC2.35□□□□□ -2.03
Usf1Q61069 Gm12044-201ENSMUST00000120335 213 ntBASIC2.35□□□□□ -2.03
Usf1Q61069 Gm22452-201ENSMUST00000122804 104 ntBASIC2.35□□□□□ -2.03
Usf1Q61069 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC2.35□□□□□ -2.03
Usf1Q61069 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.35□□□□□ -2.03
Usf1Q61069 Gm26275-201ENSMUST00000157101 268 ntBASIC2.35□□□□□ -2.03
Usf1Q61069 Gm26099-201ENSMUST00000157248 109 ntBASIC2.35□□□□□ -2.03
Usf1Q61069 Gm16111-201ENSMUST00000162128 285 ntBASIC2.35□□□□□ -2.03
Usf1Q61069 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC2.35□□□□□ -2.03
Usf1Q61069 Gm24082-201ENSMUST00000175175 83 ntBASIC2.35□□□□□ -2.03
Usf1Q61069 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC2.35□□□□□ -2.03
Usf1Q61069 Gm24137-201ENSMUST00000180055 79 ntBASIC2.35□□□□□ -2.03
Usf1Q61069 Gm22391-201ENSMUST00000180356 79 ntBASIC2.35□□□□□ -2.03
Usf1Q61069 Gm29553-201ENSMUST00000189692 279 ntBASIC2.35□□□□□ -2.03
Usf1Q61069 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC2.35□□□□□ -2.03
Usf1Q61069 Gm38146-201ENSMUST00000194121 1293 ntBASIC2.35□□□□□ -2.03
Usf1Q61069 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.35□□□□□ -2.03
Usf1Q61069 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC2.35□□□□□ -2.03
Usf1Q61069 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC2.35□□□□□ -2.03
Usf1Q61069 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.35□□□□□ -2.03
Usf1Q61069 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Usf1Q61069 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC2.34□□□□□ -2.03
Usf1Q61069 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Usf1Q61069 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
Usf1Q61069 Gm13343-201ENSMUST00000116474 105 ntBASIC2.34□□□□□ -2.03
Usf1Q61069 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC2.34□□□□□ -2.03
Usf1Q61069 Gm11357-201ENSMUST00000119758 954 ntBASIC2.34□□□□□ -2.03
Usf1Q61069 Gm14428-201ENSMUST00000120408 822 ntBASIC2.34□□□□□ -2.03
Usf1Q61069 Gm12876-201ENSMUST00000120975 408 ntBASIC2.34□□□□□ -2.03
Usf1Q61069 Gm12155-201ENSMUST00000121267 160 ntBASIC2.34□□□□□ -2.03
Usf1Q61069 Gm14848-201ENSMUST00000121850 467 ntBASIC2.34□□□□□ -2.03
Usf1Q61069 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC2.34□□□□□ -2.03
Usf1Q61069 Gm3104-201ENSMUST00000171004 473 ntBASIC2.34□□□□□ -2.03
Usf1Q61069 Gm8207-201ENSMUST00000171204 502 ntBASIC2.34□□□□□ -2.03
Usf1Q61069 Mir3964-201ENSMUST00000174898 74 ntBASIC2.34□□□□□ -2.03
Usf1Q61069 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 131.3 ms