Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Gm12871-201ENSMUST00000118758 438 ntBASIC1.77□□□□□ -2.13
Trav2Q5R1I9 Gm14867-201ENSMUST00000120156 866 ntBASIC1.77□□□□□ -2.13
Trav2Q5R1I9 Gm12881-201ENSMUST00000121191 203 ntBASIC1.77□□□□□ -2.13
Trav2Q5R1I9 Gm23469-201ENSMUST00000157131 104 ntBASIC1.77□□□□□ -2.13
Trav2Q5R1I9 Gm25961-201ENSMUST00000157174 135 ntBASIC1.77□□□□□ -2.13
Trav2Q5R1I9 Gm26348-201ENSMUST00000157528 240 ntBASIC1.77□□□□□ -2.13
Trav2Q5R1I9 Gm25910-201ENSMUST00000157620 140 ntBASIC1.77□□□□□ -2.13
Trav2Q5R1I9 Gm25368-201ENSMUST00000158847 131 ntBASIC1.77□□□□□ -2.13
Trav2Q5R1I9 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Trav2Q5R1I9 Gm24497-201ENSMUST00000177868 191 ntBASIC1.77□□□□□ -2.13
Trav2Q5R1I9 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Trav2Q5R1I9 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Trav2Q5R1I9 Gm25939-201ENSMUST00000179876 191 ntBASIC1.77□□□□□ -2.13
Trav2Q5R1I9 Igkv12-49-201ENSMUST00000197714 278 ntBASIC1.77□□□□□ -2.13
Trav2Q5R1I9 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC1.77□□□□□ -2.13
Trav2Q5R1I9 AC163289.1-201ENSMUST00000215919 262 ntBASIC1.77□□□□□ -2.13
Trav2Q5R1I9 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC1.77□□□□□ -2.13
Trav2Q5R1I9 CT571256.1-201ENSMUST00000226045 585 ntBASIC1.77□□□□□ -2.13
Trav2Q5R1I9 Gm23444-201ENSMUST00000082922 191 ntBASIC1.77□□□□□ -2.13
Trav2Q5R1I9 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Trav2Q5R1I9 Gm45393-201ENSMUST00000211634 2631 ntBASIC1.76□□□□□ -2.13
Trav2Q5R1I9 Gm43896-201ENSMUST00000203440 2032 ntBASIC1.76□□□□□ -2.13
Trav2Q5R1I9 Gm38255-201ENSMUST00000194910 2996 ntBASIC1.76□□□□□ -2.13
Trav2Q5R1I9 Gm11268-201ENSMUST00000118347 267 ntBASIC1.76□□□□□ -2.13
Trav2Q5R1I9 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC1.76□□□□□ -2.13
Trav2Q5R1I9 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC1.76□□□□□ -2.13
Trav2Q5R1I9 Gm14600-201ENSMUST00000121032 630 ntBASIC1.76□□□□□ -2.13
Trav2Q5R1I9 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC1.76□□□□□ -2.13
Trav2Q5R1I9 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC1.76□□□□□ -2.13
Trav2Q5R1I9 Gm25621-201ENSMUST00000157223 114 ntBASIC1.76□□□□□ -2.13
Trav2Q5R1I9 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
Trav2Q5R1I9 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
Trav2Q5R1I9 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
Trav2Q5R1I9 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
Trav2Q5R1I9 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
Trav2Q5R1I9 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
Trav2Q5R1I9 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
Trav2Q5R1I9 Mir8106-201ENSMUST00000184520 139 ntBASIC1.76□□□□□ -2.13
Trav2Q5R1I9 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC1.76□□□□□ -2.13
Trav2Q5R1I9 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC1.76□□□□□ -2.13
Trav2Q5R1I9 Gm43286-201ENSMUST00000197420 424 ntBASIC1.76□□□□□ -2.13
Trav2Q5R1I9 Trdv3-201ENSMUST00000198551 309 ntBASIC1.76□□□□□ -2.13
Trav2Q5R1I9 Gm43978-201ENSMUST00000203491 451 ntBASIC1.76□□□□□ -2.13
Trav2Q5R1I9 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
Trav2Q5R1I9 AL929285.1-201ENSMUST00000215522 229 ntBASIC1.76□□□□□ -2.13
Trav2Q5R1I9 AC160031.2-201ENSMUST00000218242 274 ntBASIC1.76□□□□□ -2.13
Trav2Q5R1I9 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC1.76□□□□□ -2.13
Trav2Q5R1I9 AC159885.1-201ENSMUST00000222221 199 ntBASIC1.76□□□□□ -2.13
Trav2Q5R1I9 Gm18338-201ENSMUST00000222381 560 ntBASIC1.76□□□□□ -2.13
Trav2Q5R1I9 Gm25403-201ENSMUST00000082971 143 ntBASIC1.76□□□□□ -2.13
Trav2Q5R1I9 Gm23650-201ENSMUST00000083355 70 ntBASIC1.76□□□□□ -2.13
Trav2Q5R1I9 Mir30d-201ENSMUST00000083503 82 ntBASIC1.76□□□□□ -2.13
Trav2Q5R1I9 Mir125b-2-201ENSMUST00000083538 71 ntBASIC1.76□□□□□ -2.13
Trav2Q5R1I9 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC1.76□□□□□ -2.13
Trav2Q5R1I9 Gm17969-201ENSMUST00000185706 2557 ntBASIC1.76□□□□□ -2.13
Trav2Q5R1I9 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC1.76□□□□□ -2.13
Trav2Q5R1I9 Gm42482-201ENSMUST00000198904 1947 ntBASIC1.76□□□□□ -2.13
Trav2Q5R1I9 Gm44897-201ENSMUST00000206187 1341 ntBASIC1.75□□□□□ -2.13
Trav2Q5R1I9 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Trav2Q5R1I9 Mir669d-201ENSMUST00000104644 121 ntBASIC1.75□□□□□ -2.13
Trav2Q5R1I9 Gm12941-201ENSMUST00000117934 220 ntBASIC1.75□□□□□ -2.13
Trav2Q5R1I9 Gm15896-201ENSMUST00000118045 440 ntBASIC1.75□□□□□ -2.13
Trav2Q5R1I9 Gm14652-201ENSMUST00000118479 235 ntBASIC1.75□□□□□ -2.13
Trav2Q5R1I9 Gm14126-201ENSMUST00000122345 395 ntBASIC1.75□□□□□ -2.13
Trav2Q5R1I9 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC1.75□□□□□ -2.13
Trav2Q5R1I9 Gm22159-201ENSMUST00000158412 130 ntBASIC1.75□□□□□ -2.13
Trav2Q5R1I9 Gm43804-201ENSMUST00000198280 456 ntBASIC1.75□□□□□ -2.13
Trav2Q5R1I9 Gm17893-201ENSMUST00000203017 770 ntBASIC1.75□□□□□ -2.13
Trav2Q5R1I9 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC1.75□□□□□ -2.13
Trav2Q5R1I9 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC1.75□□□□□ -2.13
Trav2Q5R1I9 AC153529.1-201ENSMUST00000217818 370 ntBASIC1.75□□□□□ -2.13
Trav2Q5R1I9 AC158803.1-201ENSMUST00000219495 316 ntBASIC1.75□□□□□ -2.13
Trav2Q5R1I9 AC122924.2-201ENSMUST00000220799 298 ntBASIC1.75□□□□□ -2.13
Trav2Q5R1I9 Gm46389-201ENSMUST00000223199 392 ntBASIC1.75□□□□□ -2.13
Trav2Q5R1I9 AC129017.1-201ENSMUST00000228363 270 ntBASIC1.75□□□□□ -2.13
Trav2Q5R1I9 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC1.75□□□□□ -2.13
Trav2Q5R1I9 Gm45558-201ENSMUST00000209384 1895 ntBASIC1.75□□□□□ -2.13
Trav2Q5R1I9 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC1.74□□□□□ -2.13
Trav2Q5R1I9 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Trav2Q5R1I9 Gm26077-201ENSMUST00000104064 123 ntBASIC1.74□□□□□ -2.13
Trav2Q5R1I9 Gm22494-201ENSMUST00000104495 128 ntBASIC1.74□□□□□ -2.13
Trav2Q5R1I9 Gm2348-201ENSMUST00000108782 300 ntBASIC1.74□□□□□ -2.13
Trav2Q5R1I9 Gm13343-201ENSMUST00000116474 105 ntBASIC1.74□□□□□ -2.13
Trav2Q5R1I9 Gm12235-201ENSMUST00000118596 170 ntBASIC1.74□□□□□ -2.13
Trav2Q5R1I9 Gm12327-201ENSMUST00000121729 1168 ntBASIC1.74□□□□□ -2.13
Trav2Q5R1I9 Gm26256-201ENSMUST00000122499 186 ntBASIC1.74□□□□□ -2.13
Trav2Q5R1I9 Gm24908-201ENSMUST00000157294 127 ntBASIC1.74□□□□□ -2.13
Trav2Q5R1I9 Gm22083-201ENSMUST00000157586 102 ntBASIC1.74□□□□□ -2.13
Trav2Q5R1I9 Gm16326-201ENSMUST00000162843 414 ntBASIC1.74□□□□□ -2.13
Trav2Q5R1I9 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC1.74□□□□□ -2.13
Trav2Q5R1I9 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC1.74□□□□□ -2.13
Trav2Q5R1I9 Gm25996-201ENSMUST00000175393 117 ntBASIC1.74□□□□□ -2.13
Trav2Q5R1I9 Mir6411-201ENSMUST00000183556 108 ntBASIC1.74□□□□□ -2.13
Trav2Q5R1I9 Gm3489-201ENSMUST00000190083 528 ntBASIC1.74□□□□□ -2.13
Trav2Q5R1I9 Gm37000-201ENSMUST00000193058 428 ntBASIC1.74□□□□□ -2.13
Trav2Q5R1I9 Gm3724-201ENSMUST00000197957 349 ntBASIC1.74□□□□□ -2.13
Trav2Q5R1I9 Gm44391-201ENSMUST00000198490 93 ntBASIC1.74□□□□□ -2.13
Trav2Q5R1I9 Mir497-201ENSMUST00000200557 84 ntBASIC1.74□□□□□ -2.13
Trav2Q5R1I9 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.74□□□□□ -2.13
Trav2Q5R1I9 Gm19326-201ENSMUST00000219818 326 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms