Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Gm23441-201ENSMUST00000157268 127 ntBASIC1.19□□□□□ -2.22
Trav6d-4Q5R1I0 Gm26049-201ENSMUST00000157313 108 ntBASIC1.19□□□□□ -2.22
Trav6d-4Q5R1I0 Gm24959-201ENSMUST00000157924 146 ntBASIC1.19□□□□□ -2.22
Trav6d-4Q5R1I0 Gm24222-201ENSMUST00000158834 93 ntBASIC1.19□□□□□ -2.22
Trav6d-4Q5R1I0 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC1.19□□□□□ -2.22
Trav6d-4Q5R1I0 Mir5101-201ENSMUST00000175181 83 ntBASIC1.19□□□□□ -2.22
Trav6d-4Q5R1I0 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC1.19□□□□□ -2.22
Trav6d-4Q5R1I0 Gm24304-201ENSMUST00000177635 107 ntBASIC1.19□□□□□ -2.22
Trav6d-4Q5R1I0 Gm18956-201ENSMUST00000192857 480 ntBASIC1.19□□□□□ -2.22
Trav6d-4Q5R1I0 Gm32175-201ENSMUST00000193641 346 ntBASIC1.19□□□□□ -2.22
Trav6d-4Q5R1I0 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
Trav6d-4Q5R1I0 Gm45701-201ENSMUST00000212049 235 ntBASIC1.19□□□□□ -2.22
Trav6d-4Q5R1I0 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC1.19□□□□□ -2.22
Trav6d-4Q5R1I0 AC116726.2-201ENSMUST00000217629 986 ntBASIC1.19□□□□□ -2.22
Trav6d-4Q5R1I0 Gm16976-205ENSMUST00000227324 226 ntBASIC1.19□□□□□ -2.22
Trav6d-4Q5R1I0 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC1.19□□□□□ -2.22
Trav6d-4Q5R1I0 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
Trav6d-4Q5R1I0 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC1.19□□□□□ -2.22
Trav6d-4Q5R1I0 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Trav6d-4Q5R1I0 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Trav6d-4Q5R1I0 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Trav6d-4Q5R1I0 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC1.18□□□□□ -2.22
Trav6d-4Q5R1I0 Gm12814-201ENSMUST00000117091 846 ntBASIC1.18□□□□□ -2.22
Trav6d-4Q5R1I0 Gm6806-201ENSMUST00000120092 1006 ntBASIC1.18□□□□□ -2.22
Trav6d-4Q5R1I0 Gm16100-201ENSMUST00000120489 231 ntBASIC1.18□□□□□ -2.22
Trav6d-4Q5R1I0 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.18□□□□□ -2.22
Trav6d-4Q5R1I0 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.18□□□□□ -2.22
Trav6d-4Q5R1I0 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC1.18□□□□□ -2.22
Trav6d-4Q5R1I0 Gm21809-201ENSMUST00000178495 468 ntBASIC1.18□□□□□ -2.22
Trav6d-4Q5R1I0 Gm26960-201ENSMUST00000182263 412 ntBASIC1.18□□□□□ -2.22
Trav6d-4Q5R1I0 Gm27161-201ENSMUST00000183960 562 ntBASIC1.18□□□□□ -2.22
Trav6d-4Q5R1I0 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC1.18□□□□□ -2.22
Trav6d-4Q5R1I0 Gm7329-201ENSMUST00000185915 210 ntBASIC1.18□□□□□ -2.22
Trav6d-4Q5R1I0 Gm43765-201ENSMUST00000196303 893 ntBASIC1.18□□□□□ -2.22
Trav6d-4Q5R1I0 Gm5317-201ENSMUST00000204445 847 ntBASIC1.18□□□□□ -2.22
Trav6d-4Q5R1I0 Gm44794-201ENSMUST00000206550 411 ntBASIC1.18□□□□□ -2.22
Trav6d-4Q5R1I0 Gm44657-201ENSMUST00000208568 450 ntBASIC1.18□□□□□ -2.22
Trav6d-4Q5R1I0 Gm9318-201ENSMUST00000222444 438 ntBASIC1.18□□□□□ -2.22
Trav6d-4Q5R1I0 CT010480.5-201ENSMUST00000225026 217 ntBASIC1.18□□□□□ -2.22
Trav6d-4Q5R1I0 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.18□□□□□ -2.22
Trav6d-4Q5R1I0 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
Trav6d-4Q5R1I0 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC1.17□□□□□ -2.22
Trav6d-4Q5R1I0 Gm16400-201ENSMUST00000116523 1029 ntBASIC1.17□□□□□ -2.22
Trav6d-4Q5R1I0 Gm12765-201ENSMUST00000117273 615 ntBASIC1.17□□□□□ -2.22
Trav6d-4Q5R1I0 Gm15113-201ENSMUST00000119280 836 ntBASIC1.17□□□□□ -2.22
Trav6d-4Q5R1I0 Gm22963-201ENSMUST00000157960 91 ntBASIC1.17□□□□□ -2.22
Trav6d-4Q5R1I0 Gm25332-201ENSMUST00000158038 105 ntBASIC1.17□□□□□ -2.22
Trav6d-4Q5R1I0 Gm23221-201ENSMUST00000158118 93 ntBASIC1.17□□□□□ -2.22
Trav6d-4Q5R1I0 Gm17085-201ENSMUST00000165425 502 ntBASIC1.17□□□□□ -2.22
Trav6d-4Q5R1I0 Mup-ps7-201ENSMUST00000178292 545 ntBASIC1.17□□□□□ -2.22
Trav6d-4Q5R1I0 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
Trav6d-4Q5R1I0 Gm27520-201ENSMUST00000184872 81 ntBASIC1.17□□□□□ -2.22
Trav6d-4Q5R1I0 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
Trav6d-4Q5R1I0 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
Trav6d-4Q5R1I0 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
Trav6d-4Q5R1I0 Gm20811-201ENSMUST00000190500 553 ntBASIC1.17□□□□□ -2.22
Trav6d-4Q5R1I0 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
Trav6d-4Q5R1I0 Gm38146-201ENSMUST00000194121 1293 ntBASIC1.17□□□□□ -2.22
Trav6d-4Q5R1I0 Gm43708-201ENSMUST00000198857 961 ntBASIC1.17□□□□□ -2.22
Trav6d-4Q5R1I0 Gm43675-201ENSMUST00000199468 1184 ntBASIC1.17□□□□□ -2.22
Trav6d-4Q5R1I0 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC1.17□□□□□ -2.22
Trav6d-4Q5R1I0 AC105958.2-201ENSMUST00000214167 191 ntBASIC1.17□□□□□ -2.22
Trav6d-4Q5R1I0 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC1.17□□□□□ -2.22
Trav6d-4Q5R1I0 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC1.17□□□□□ -2.22
Trav6d-4Q5R1I0 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.17□□□□□ -2.22
Trav6d-4Q5R1I0 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.17□□□□□ -2.22
Trav6d-4Q5R1I0 Gm6109-201ENSMUST00000223297 348 ntBASIC1.17□□□□□ -2.22
Trav6d-4Q5R1I0 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Trav6d-4Q5R1I0 Mir300-201ENSMUST00000083485 79 ntBASIC1.17□□□□□ -2.22
Trav6d-4Q5R1I0 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
Trav6d-4Q5R1I0 Gm23336-201ENSMUST00000117023 123 ntBASIC1.16□□□□□ -2.22
Trav6d-4Q5R1I0 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC1.16□□□□□ -2.22
Trav6d-4Q5R1I0 Gm13602-201ENSMUST00000122405 493 ntBASIC1.16□□□□□ -2.22
Trav6d-4Q5R1I0 Gm24060-201ENSMUST00000157494 95 ntBASIC1.16□□□□□ -2.22
Trav6d-4Q5R1I0 Gm24552-201ENSMUST00000158646 103 ntBASIC1.16□□□□□ -2.22
Trav6d-4Q5R1I0 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC1.16□□□□□ -2.22
Trav6d-4Q5R1I0 Gm23267-201ENSMUST00000178490 132 ntBASIC1.16□□□□□ -2.22
Trav6d-4Q5R1I0 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Trav6d-4Q5R1I0 Mir7241-201ENSMUST00000184532 64 ntBASIC1.16□□□□□ -2.22
Trav6d-4Q5R1I0 Gm43286-201ENSMUST00000197420 424 ntBASIC1.16□□□□□ -2.22
Trav6d-4Q5R1I0 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.16□□□□□ -2.22
Trav6d-4Q5R1I0 AC133176.1-201ENSMUST00000226668 219 ntBASIC1.16□□□□□ -2.22
Trav6d-4Q5R1I0 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
Trav6d-4Q5R1I0 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC1.16□□□□□ -2.22
Trav6d-4Q5R1I0 Gm14390-201ENSMUST00000117505 1695 ntBASIC1.16□□□□□ -2.22
Trav6d-4Q5R1I0 Gm5596-201ENSMUST00000207988 2421 ntBASIC1.16□□□□□ -2.22
Trav6d-4Q5R1I0 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.15□□□□□ -2.22
Trav6d-4Q5R1I0 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.22
Trav6d-4Q5R1I0 Gm16411-201ENSMUST00000122164 1100 ntBASIC1.15□□□□□ -2.23
Trav6d-4Q5R1I0 Gm24895-201ENSMUST00000122742 74 ntBASIC1.15□□□□□ -2.23
Trav6d-4Q5R1I0 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC1.15□□□□□ -2.23
Trav6d-4Q5R1I0 Gm17113-201ENSMUST00000170118 171 ntBASIC1.15□□□□□ -2.23
Trav6d-4Q5R1I0 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
Trav6d-4Q5R1I0 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC1.15□□□□□ -2.23
Trav6d-4Q5R1I0 Gm43978-201ENSMUST00000203491 451 ntBASIC1.15□□□□□ -2.23
Trav6d-4Q5R1I0 Gm31532-201ENSMUST00000203555 767 ntBASIC1.15□□□□□ -2.23
Trav6d-4Q5R1I0 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC1.15□□□□□ -2.23
Trav6d-4Q5R1I0 Gm29920-201ENSMUST00000206876 754 ntBASIC1.15□□□□□ -2.23
Trav6d-4Q5R1I0 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC1.15□□□□□ -2.23
Trav6d-4Q5R1I0 AC164567.2-201ENSMUST00000219363 445 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms