Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm29413-201ENSMUST00000186019 880 ntBASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Gm28356-202ENSMUST00000187566 858 ntBASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Gm28700-201ENSMUST00000187614 579 ntBASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Gm29639-201ENSMUST00000188375 580 ntBASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Gm28843-201ENSMUST00000189198 678 ntBASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Gm20885-201ENSMUST00000190192 654 ntBASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Gm29546-201ENSMUST00000191171 678 ntBASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Gm37449-201ENSMUST00000193016 270 ntBASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Gm20172-201ENSMUST00000193138 1551 ntBASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Gm33571-201ENSMUST00000193271 657 ntBASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Gm36866-201ENSMUST00000193343 657 ntBASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Gm36047-201ENSMUST00000193659 657 ntBASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Gm37236-201ENSMUST00000193670 3249 ntBASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Gm20857-201ENSMUST00000194766 657 ntBASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Gm20858-201ENSMUST00000195459 657 ntBASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Gm18658-201ENSMUST00000195558 270 ntBASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Mir9-1-201ENSMUST00000199907 89 ntBASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Gm44524-201ENSMUST00000203899 271 ntBASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Gm44459-201ENSMUST00000203926 160 ntBASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 AC141895.1-201ENSMUST00000218141 273 ntBASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 AC154600.1-201ENSMUST00000226480 714 ntBASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 AC134335.1-201ENSMUST00000227626 329 ntBASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Gm5471-201ENSMUST00000072732 337 ntBASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Gm25257-201ENSMUST00000083907 110 ntBASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Trav3-3Q5R1C3 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Trav3-3Q5R1C3 Gm25764-201ENSMUST00000104092 134 ntBASIC1.86□□□□□ -2.11
Trav3-3Q5R1C3 Gm22496-201ENSMUST00000104493 88 ntBASIC1.86□□□□□ -2.11
Trav3-3Q5R1C3 Gm23911-201ENSMUST00000104596 134 ntBASIC1.86□□□□□ -2.11
Trav3-3Q5R1C3 Gm25317-201ENSMUST00000116824 129 ntBASIC1.86□□□□□ -2.11
Trav3-3Q5R1C3 Gm12787-201ENSMUST00000119234 396 ntBASIC1.86□□□□□ -2.11
Trav3-3Q5R1C3 Gm14593-201ENSMUST00000119948 294 ntBASIC1.86□□□□□ -2.11
Trav3-3Q5R1C3 Gm14428-201ENSMUST00000120408 822 ntBASIC1.86□□□□□ -2.11
Trav3-3Q5R1C3 DQ267100-201ENSMUST00000122600 72 ntBASIC1.86□□□□□ -2.11
Trav3-3Q5R1C3 Gm25175-201ENSMUST00000178712 79 ntBASIC1.86□□□□□ -2.11
Trav3-3Q5R1C3 Gm5329-201ENSMUST00000186898 463 ntBASIC1.86□□□□□ -2.11
Trav3-3Q5R1C3 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC1.86□□□□□ -2.11
Trav3-3Q5R1C3 Gm28438-201ENSMUST00000188299 345 ntBASIC1.86□□□□□ -2.11
Trav3-3Q5R1C3 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Trav3-3Q5R1C3 Gm37664-201ENSMUST00000194607 3813 ntBASIC1.86□□□□□ -2.11
Trav3-3Q5R1C3 Gm8023-201ENSMUST00000195298 903 ntBASIC1.86□□□□□ -2.11
Trav3-3Q5R1C3 Gm43007-201ENSMUST00000197618 291 ntBASIC1.86□□□□□ -2.11
Trav3-3Q5R1C3 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
Trav3-3Q5R1C3 Gm43405-201ENSMUST00000198642 337 ntBASIC1.86□□□□□ -2.11
Trav3-3Q5R1C3 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC1.86□□□□□ -2.11
Trav3-3Q5R1C3 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC1.86□□□□□ -2.11
Trav3-3Q5R1C3 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Trav3-3Q5R1C3 AC154506.3-201ENSMUST00000225417 213 ntBASIC1.86□□□□□ -2.11
Trav3-3Q5R1C3 Olfr197-201ENSMUST00000080031 926 ntBASIC1.86□□□□□ -2.11
Trav3-3Q5R1C3 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Trav3-3Q5R1C3 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
Trav3-3Q5R1C3 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Trav3-3Q5R1C3 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Trav3-3Q5R1C3 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Trav3-3Q5R1C3 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC1.85□□□□□ -2.11
Trav3-3Q5R1C3 Gm37941-201ENSMUST00000192170 2309 ntBASIC1.85□□□□□ -2.11
Trav3-3Q5R1C3 Gm13136-201ENSMUST00000121031 2950 ntBASIC1.85□□□□□ -2.11
Trav3-3Q5R1C3 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC1.85□□□□□ -2.11
Trav3-3Q5R1C3 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
Trav3-3Q5R1C3 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC1.85□□□□□ -2.11
Trav3-3Q5R1C3 Gm22151-201ENSMUST00000116963 58 ntBASIC1.85□□□□□ -2.11
Trav3-3Q5R1C3 Gm13331-201ENSMUST00000117500 448 ntBASIC1.85□□□□□ -2.11
Trav3-3Q5R1C3 AA413626-201ENSMUST00000121125 494 ntBASIC1.85□□□□□ -2.11
Trav3-3Q5R1C3 Gm12071-201ENSMUST00000121968 469 ntBASIC1.85□□□□□ -2.11
Trav3-3Q5R1C3 Gm23118-201ENSMUST00000122657 187 ntBASIC1.85□□□□□ -2.11
Trav3-3Q5R1C3 Gm25294-201ENSMUST00000122791 104 ntBASIC1.85□□□□□ -2.11
Trav3-3Q5R1C3 Gm24291-201ENSMUST00000157633 162 ntBASIC1.85□□□□□ -2.11
Trav3-3Q5R1C3 Gm24681-201ENSMUST00000158760 107 ntBASIC1.85□□□□□ -2.11
Trav3-3Q5R1C3 Gm25365-201ENSMUST00000158852 121 ntBASIC1.85□□□□□ -2.11
Trav3-3Q5R1C3 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Trav3-3Q5R1C3 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC1.85□□□□□ -2.11
Trav3-3Q5R1C3 Gm17054-201ENSMUST00000169811 259 ntBASIC1.85□□□□□ -2.11
Trav3-3Q5R1C3 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC1.85□□□□□ -2.11
Trav3-3Q5R1C3 Gm27245-201ENSMUST00000184385 376 ntBASIC1.85□□□□□ -2.11
Trav3-3Q5R1C3 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC1.85□□□□□ -2.11
Trav3-3Q5R1C3 Gm28951-201ENSMUST00000190742 313 ntBASIC1.85□□□□□ -2.11
Trav3-3Q5R1C3 Gm32033-201ENSMUST00000193483 339 ntBASIC1.85□□□□□ -2.11
Trav3-3Q5R1C3 Gm44395-201ENSMUST00000197056 153 ntBASIC1.85□□□□□ -2.11
Trav3-3Q5R1C3 Gm44472-201ENSMUST00000204922 943 ntBASIC1.85□□□□□ -2.11
Trav3-3Q5R1C3 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Trav3-3Q5R1C3 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC1.85□□□□□ -2.11
Trav3-3Q5R1C3 Gm9973-202ENSMUST00000220926 166 ntBASIC1.85□□□□□ -2.11
Trav3-3Q5R1C3 AC155305.1-201ENSMUST00000222207 319 ntBASIC1.85□□□□□ -2.11
Trav3-3Q5R1C3 AC183096.1-201ENSMUST00000226392 130 ntBASIC1.85□□□□□ -2.11
Trav3-3Q5R1C3 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC1.85□□□□□ -2.11
Trav3-3Q5R1C3 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Trav3-3Q5R1C3 Gm24313-201ENSMUST00000082561 133 ntBASIC1.85□□□□□ -2.11
Trav3-3Q5R1C3 Gm14445-201ENSMUST00000117051 1484 ntBASIC1.85□□□□□ -2.11
Trav3-3Q5R1C3 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trav3-3Q5R1C3 Gm15084-201ENSMUST00000178585 1502 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 92.2 ms