Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim41Q5NCC3 Gm23925-201ENSMUST00000082471 132 ntBASIC7.78□□□□□ -1.16
Trim41Q5NCC3 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Trim41Q5NCC3 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC7.78□□□□□ -1.16
Trim41Q5NCC3 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
Trim41Q5NCC3 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC7.77□□□□□ -1.16
Trim41Q5NCC3 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Trim41Q5NCC3 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
Trim41Q5NCC3 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Trim41Q5NCC3 Defa-ps9-201ENSMUST00000118264 276 ntBASIC7.77□□□□□ -1.17
Trim41Q5NCC3 Gm12719-201ENSMUST00000118859 241 ntBASIC7.77□□□□□ -1.17
Trim41Q5NCC3 Gm25457-201ENSMUST00000179509 107 ntBASIC7.77□□□□□ -1.17
Trim41Q5NCC3 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC7.77□□□□□ -1.17
Trim41Q5NCC3 AC091783.5-201ENSMUST00000224928 671 ntBASIC7.77□□□□□ -1.17
Trim41Q5NCC3 Gm43300-201ENSMUST00000198540 2043 ntBASIC7.77□□□□□ -1.17
Trim41Q5NCC3 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trim41Q5NCC3 Gm38106-201ENSMUST00000194107 2534 ntBASIC7.77□□□□□ -1.17
Trim41Q5NCC3 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC7.77□□□□□ -1.17
Trim41Q5NCC3 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim41Q5NCC3 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim41Q5NCC3 Gm17976-201ENSMUST00000184037 1909 ntBASIC7.76□□□□□ -1.17
Trim41Q5NCC3 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Trim41Q5NCC3 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim41Q5NCC3 Gm24172-201ENSMUST00000104127 117 ntBASIC7.76□□□□□ -1.17
Trim41Q5NCC3 Gm26293-201ENSMUST00000104170 84 ntBASIC7.76□□□□□ -1.17
Trim41Q5NCC3 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC7.76□□□□□ -1.17
Trim41Q5NCC3 Gm25965-201ENSMUST00000157170 93 ntBASIC7.76□□□□□ -1.17
Trim41Q5NCC3 Gm26347-201ENSMUST00000157526 131 ntBASIC7.76□□□□□ -1.17
Trim41Q5NCC3 Gm22890-201ENSMUST00000158642 144 ntBASIC7.76□□□□□ -1.17
Trim41Q5NCC3 Gm24084-201ENSMUST00000175173 137 ntBASIC7.76□□□□□ -1.17
Trim41Q5NCC3 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC7.76□□□□□ -1.17
Trim41Q5NCC3 Gm29574-201ENSMUST00000186226 696 ntBASIC7.76□□□□□ -1.17
Trim41Q5NCC3 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim41Q5NCC3 Gm24204-201ENSMUST00000082950 107 ntBASIC7.76□□□□□ -1.17
Trim41Q5NCC3 Gm22739-201ENSMUST00000083437 160 ntBASIC7.76□□□□□ -1.17
Trim41Q5NCC3 Gm45211-201ENSMUST00000206208 2650 ntBASIC7.76□□□□□ -1.17
Trim41Q5NCC3 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Trim41Q5NCC3 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Trim41Q5NCC3 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim41Q5NCC3 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trim41Q5NCC3 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trim41Q5NCC3 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Trim41Q5NCC3 Gm25089-201ENSMUST00000102015 79 ntBASIC7.75□□□□□ -1.17
Trim41Q5NCC3 Gm24951-201ENSMUST00000102182 109 ntBASIC7.75□□□□□ -1.17
Trim41Q5NCC3 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Trim41Q5NCC3 Gm13321-201ENSMUST00000117101 400 ntBASIC7.75□□□□□ -1.17
Trim41Q5NCC3 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Trim41Q5NCC3 Gm25840-201ENSMUST00000177821 79 ntBASIC7.75□□□□□ -1.17
Trim41Q5NCC3 Gm24952-201ENSMUST00000177909 79 ntBASIC7.75□□□□□ -1.17
Trim41Q5NCC3 Gm23682-201ENSMUST00000178146 79 ntBASIC7.75□□□□□ -1.17
Trim41Q5NCC3 Gm24652-201ENSMUST00000178223 79 ntBASIC7.75□□□□□ -1.17
Trim41Q5NCC3 Gm22629-201ENSMUST00000178272 79 ntBASIC7.75□□□□□ -1.17
Trim41Q5NCC3 Gm24021-201ENSMUST00000178435 79 ntBASIC7.75□□□□□ -1.17
Trim41Q5NCC3 Gm22274-201ENSMUST00000178441 79 ntBASIC7.75□□□□□ -1.17
Trim41Q5NCC3 Gm22050-201ENSMUST00000178442 79 ntBASIC7.75□□□□□ -1.17
Trim41Q5NCC3 Gm23688-201ENSMUST00000178502 79 ntBASIC7.75□□□□□ -1.17
Trim41Q5NCC3 Gm23944-201ENSMUST00000178607 79 ntBASIC7.75□□□□□ -1.17
Trim41Q5NCC3 Gm26283-201ENSMUST00000178625 79 ntBASIC7.75□□□□□ -1.17
Trim41Q5NCC3 Gm25452-201ENSMUST00000178776 79 ntBASIC7.75□□□□□ -1.17
Trim41Q5NCC3 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Trim41Q5NCC3 Gm23286-201ENSMUST00000178963 79 ntBASIC7.75□□□□□ -1.17
Trim41Q5NCC3 Gm22640-201ENSMUST00000179035 79 ntBASIC7.75□□□□□ -1.17
Trim41Q5NCC3 Gm25984-201ENSMUST00000179129 79 ntBASIC7.75□□□□□ -1.17
Trim41Q5NCC3 Gm25585-201ENSMUST00000179469 79 ntBASIC7.75□□□□□ -1.17
Trim41Q5NCC3 Gm26374-201ENSMUST00000179737 79 ntBASIC7.75□□□□□ -1.17
Trim41Q5NCC3 Gm24040-201ENSMUST00000179786 79 ntBASIC7.75□□□□□ -1.17
Trim41Q5NCC3 Gm25017-201ENSMUST00000179805 79 ntBASIC7.75□□□□□ -1.17
Trim41Q5NCC3 Gm23618-201ENSMUST00000179912 79 ntBASIC7.75□□□□□ -1.17
Trim41Q5NCC3 Gm26284-201ENSMUST00000180107 79 ntBASIC7.75□□□□□ -1.17
Trim41Q5NCC3 Gm24570-201ENSMUST00000180314 79 ntBASIC7.75□□□□□ -1.17
Trim41Q5NCC3 Gm24654-201ENSMUST00000180315 79 ntBASIC7.75□□□□□ -1.17
Trim41Q5NCC3 Gm28339-201ENSMUST00000185845 696 ntBASIC7.75□□□□□ -1.17
Trim41Q5NCC3 Gm28828-201ENSMUST00000186601 696 ntBASIC7.75□□□□□ -1.17
Trim41Q5NCC3 Gm28896-201ENSMUST00000188609 696 ntBASIC7.75□□□□□ -1.17
Trim41Q5NCC3 Gm28159-201ENSMUST00000190296 696 ntBASIC7.75□□□□□ -1.17
Trim41Q5NCC3 Gm38107-201ENSMUST00000194873 696 ntBASIC7.75□□□□□ -1.17
Trim41Q5NCC3 Gm5876-201ENSMUST00000203735 243 ntBASIC7.75□□□□□ -1.17
Trim41Q5NCC3 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC7.75□□□□□ -1.17
Trim41Q5NCC3 AC161256.1-201ENSMUST00000217312 213 ntBASIC7.75□□□□□ -1.17
Trim41Q5NCC3 Gm38207-201ENSMUST00000193009 3505 ntBASIC7.75□□□□□ -1.17
Trim41Q5NCC3 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Trim41Q5NCC3 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trim41Q5NCC3 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trim41Q5NCC3 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Trim41Q5NCC3 AC153964.1-201ENSMUST00000219677 3142 ntBASIC7.74□□□□□ -1.17
Trim41Q5NCC3 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trim41Q5NCC3 Gm15497-201ENSMUST00000119137 551 ntBASIC7.74□□□□□ -1.17
Trim41Q5NCC3 Gm7308-201ENSMUST00000121087 447 ntBASIC7.74□□□□□ -1.17
Trim41Q5NCC3 Gm10444-201ENSMUST00000126708 148 ntBASIC7.74□□□□□ -1.17
Trim41Q5NCC3 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC7.74□□□□□ -1.17
Trim41Q5NCC3 Gm24213-201ENSMUST00000158255 258 ntBASIC7.74□□□□□ -1.17
Trim41Q5NCC3 Gm23112-201ENSMUST00000158606 125 ntBASIC7.74□□□□□ -1.17
Trim41Q5NCC3 Gm17166-201ENSMUST00000172006 431 ntBASIC7.74□□□□□ -1.17
Trim41Q5NCC3 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC7.74□□□□□ -1.17
Trim41Q5NCC3 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Trim41Q5NCC3 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC7.74□□□□□ -1.17
Trim41Q5NCC3 Gm18502-201ENSMUST00000218679 199 ntBASIC7.74□□□□□ -1.17
Trim41Q5NCC3 n-R5s162-201ENSMUST00000082581 119 ntBASIC7.74□□□□□ -1.17
Trim41Q5NCC3 Gm22294-201ENSMUST00000083308 104 ntBASIC7.74□□□□□ -1.17
Trim41Q5NCC3 Gm43844-201ENSMUST00000202926 5605 ntBASIC7.74□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 129.3 ms