Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Rc3h1Q4VGL6 Gm42876-201ENSMUST00000196989 3215 ntBASIC5.11□□□□□ -1.59
Rc3h1Q4VGL6 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Rc3h1Q4VGL6 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Rc3h1Q4VGL6 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Rc3h1Q4VGL6 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Rc3h1Q4VGL6 Gm12617-201ENSMUST00000121268 381 ntBASIC5.11□□□□□ -1.59
Rc3h1Q4VGL6 Gm11931-201ENSMUST00000121630 447 ntBASIC5.11□□□□□ -1.59
Rc3h1Q4VGL6 Gm11334-201ENSMUST00000121969 156 ntBASIC5.11□□□□□ -1.59
Rc3h1Q4VGL6 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC5.11□□□□□ -1.59
Rc3h1Q4VGL6 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC5.11□□□□□ -1.59
Rc3h1Q4VGL6 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC5.11□□□□□ -1.59
Rc3h1Q4VGL6 Gm25115-201ENSMUST00000157187 140 ntBASIC5.11□□□□□ -1.59
Rc3h1Q4VGL6 Gm22654-201ENSMUST00000157874 105 ntBASIC5.11□□□□□ -1.59
Rc3h1Q4VGL6 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC5.11□□□□□ -1.59
Rc3h1Q4VGL6 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Rc3h1Q4VGL6 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC5.11□□□□□ -1.59
Rc3h1Q4VGL6 Gm42647-201ENSMUST00000195939 459 ntBASIC5.11□□□□□ -1.59
Rc3h1Q4VGL6 Gm43704-201ENSMUST00000196164 496 ntBASIC5.11□□□□□ -1.59
Rc3h1Q4VGL6 Gm6303-201ENSMUST00000210123 471 ntBASIC5.11□□□□□ -1.59
Rc3h1Q4VGL6 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC5.11□□□□□ -1.59
Rc3h1Q4VGL6 AC101945.3-201ENSMUST00000226568 153 ntBASIC5.11□□□□□ -1.59
Rc3h1Q4VGL6 Gm25698-201ENSMUST00000082897 107 ntBASIC5.11□□□□□ -1.59
Rc3h1Q4VGL6 Gm25411-201ENSMUST00000083760 151 ntBASIC5.11□□□□□ -1.59
Rc3h1Q4VGL6 Snora2b-201ENSMUST00000084005 137 ntBASIC5.11□□□□□ -1.59
Rc3h1Q4VGL6 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Rc3h1Q4VGL6 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
Rc3h1Q4VGL6 Gm44438-201ENSMUST00000204388 3236 ntBASIC5.11□□□□□ -1.59
Rc3h1Q4VGL6 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Rc3h1Q4VGL6 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC5.11□□□□□ -1.59
Rc3h1Q4VGL6 Gm8989-201ENSMUST00000184782 7275 ntBASIC5.11□□□□□ -1.59
Rc3h1Q4VGL6 Gm38020-201ENSMUST00000193066 4676 ntBASIC5.11□□□□□ -1.59
Rc3h1Q4VGL6 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
Rc3h1Q4VGL6 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Rc3h1Q4VGL6 Snord66-201ENSMUST00000104051 75 ntBASIC5.1□□□□□ -1.59
Rc3h1Q4VGL6 Gm11432-201ENSMUST00000117334 231 ntBASIC5.1□□□□□ -1.59
Rc3h1Q4VGL6 Gm23789-201ENSMUST00000122536 301 ntBASIC5.1□□□□□ -1.59
Rc3h1Q4VGL6 Gm10444-201ENSMUST00000126708 148 ntBASIC5.1□□□□□ -1.59
Rc3h1Q4VGL6 Gm10059-201ENSMUST00000131139 171 ntBASIC5.1□□□□□ -1.59
Rc3h1Q4VGL6 Gm22349-201ENSMUST00000157864 107 ntBASIC5.1□□□□□ -1.59
Rc3h1Q4VGL6 Gm22767-201ENSMUST00000158365 165 ntBASIC5.1□□□□□ -1.59
Rc3h1Q4VGL6 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Rc3h1Q4VGL6 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Rc3h1Q4VGL6 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Rc3h1Q4VGL6 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC5.1□□□□□ -1.59
Rc3h1Q4VGL6 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC5.1□□□□□ -1.59
Rc3h1Q4VGL6 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC5.1□□□□□ -1.59
Rc3h1Q4VGL6 Gm17951-201ENSMUST00000198536 496 ntBASIC5.1□□□□□ -1.59
Rc3h1Q4VGL6 Gm43604-201ENSMUST00000199799 705 ntBASIC5.1□□□□□ -1.59
Rc3h1Q4VGL6 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC5.1□□□□□ -1.59
Rc3h1Q4VGL6 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC5.1□□□□□ -1.59
Rc3h1Q4VGL6 Mir26a-2-201ENSMUST00000083496 84 ntBASIC5.1□□□□□ -1.59
Rc3h1Q4VGL6 Gm23039-201ENSMUST00000083870 161 ntBASIC5.1□□□□□ -1.59
Rc3h1Q4VGL6 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Rc3h1Q4VGL6 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Rc3h1Q4VGL6 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Rc3h1Q4VGL6 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
Rc3h1Q4VGL6 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Rc3h1Q4VGL6 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC5.1□□□□□ -1.59
Rc3h1Q4VGL6 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Rc3h1Q4VGL6 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC5.09□□□□□ -1.59
Rc3h1Q4VGL6 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Rc3h1Q4VGL6 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Rc3h1Q4VGL6 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Rc3h1Q4VGL6 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Rc3h1Q4VGL6 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Rc3h1Q4VGL6 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Rc3h1Q4VGL6 Gm15926-201ENSMUST00000120492 550 ntBASIC5.09□□□□□ -1.59
Rc3h1Q4VGL6 Gm14916-201ENSMUST00000121904 204 ntBASIC5.09□□□□□ -1.59
Rc3h1Q4VGL6 Gm25965-201ENSMUST00000157170 93 ntBASIC5.09□□□□□ -1.59
Rc3h1Q4VGL6 Gm22611-201ENSMUST00000158288 150 ntBASIC5.09□□□□□ -1.59
Rc3h1Q4VGL6 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC5.09□□□□□ -1.59
Rc3h1Q4VGL6 Gm24084-201ENSMUST00000175173 137 ntBASIC5.09□□□□□ -1.59
Rc3h1Q4VGL6 Gm22699-201ENSMUST00000175376 105 ntBASIC5.09□□□□□ -1.59
Rc3h1Q4VGL6 Gm22069-201ENSMUST00000179911 107 ntBASIC5.09□□□□□ -1.59
Rc3h1Q4VGL6 Gm28627-201ENSMUST00000186141 453 ntBASIC5.09□□□□□ -1.59
Rc3h1Q4VGL6 Mir1a-2-201ENSMUST00000198520 72 ntBASIC5.09□□□□□ -1.59
Rc3h1Q4VGL6 Gm42990-201ENSMUST00000199231 312 ntBASIC5.09□□□□□ -1.59
Rc3h1Q4VGL6 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Rc3h1Q4VGL6 Gm45907-201ENSMUST00000213023 193 ntBASIC5.09□□□□□ -1.59
Rc3h1Q4VGL6 AC123803.1-201ENSMUST00000216093 189 ntBASIC5.09□□□□□ -1.59
Rc3h1Q4VGL6 AC123533.1-201ENSMUST00000227782 446 ntBASIC5.09□□□□□ -1.59
Rc3h1Q4VGL6 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Rc3h1Q4VGL6 Gm26121-201ENSMUST00000083364 162 ntBASIC5.09□□□□□ -1.59
Rc3h1Q4VGL6 Mir383-201ENSMUST00000083523 70 ntBASIC5.09□□□□□ -1.59
Rc3h1Q4VGL6 Gm43605-201ENSMUST00000199663 3426 ntBASIC5.09□□□□□ -1.59
Rc3h1Q4VGL6 AC160931.3-201ENSMUST00000222111 2267 ntBASIC5.09□□□□□ -1.59
Rc3h1Q4VGL6 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.6
Rc3h1Q4VGL6 Gm43329-201ENSMUST00000200120 3232 ntBASIC5.08□□□□□ -1.6
Rc3h1Q4VGL6 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Rc3h1Q4VGL6 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Rc3h1Q4VGL6 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Rc3h1Q4VGL6 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Rc3h1Q4VGL6 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC5.08□□□□□ -1.6
Rc3h1Q4VGL6 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Rc3h1Q4VGL6 Gm23319-201ENSMUST00000104467 131 ntBASIC5.08□□□□□ -1.6
Rc3h1Q4VGL6 Gm22493-201ENSMUST00000104494 132 ntBASIC5.08□□□□□ -1.6
Rc3h1Q4VGL6 Gm14748-201ENSMUST00000119819 411 ntBASIC5.08□□□□□ -1.6
Rc3h1Q4VGL6 Gm22453-201ENSMUST00000122801 318 ntBASIC5.08□□□□□ -1.6
Rc3h1Q4VGL6 Gm26414-201ENSMUST00000157674 269 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms