Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC2.24□□□□□ -2.05
Upf3bQ3ULL6 Gm20648-201ENSMUST00000175815 328 ntBASIC2.24□□□□□ -2.05
Upf3bQ3ULL6 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC2.24□□□□□ -2.05
Upf3bQ3ULL6 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
Upf3bQ3ULL6 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Upf3bQ3ULL6 Igkv12-49-201ENSMUST00000197714 278 ntBASIC2.24□□□□□ -2.05
Upf3bQ3ULL6 Gm44041-201ENSMUST00000203678 396 ntBASIC2.24□□□□□ -2.05
Upf3bQ3ULL6 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC2.24□□□□□ -2.05
Upf3bQ3ULL6 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Upf3bQ3ULL6 AC122924.2-201ENSMUST00000220799 298 ntBASIC2.24□□□□□ -2.05
Upf3bQ3ULL6 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Upf3bQ3ULL6 Snora69-201ENSMUST00000083708 131 ntBASIC2.24□□□□□ -2.05
Upf3bQ3ULL6 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.24□□□□□ -2.05
Upf3bQ3ULL6 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Upf3bQ3ULL6 Gm43896-201ENSMUST00000203440 2032 ntBASIC2.24□□□□□ -2.05
Upf3bQ3ULL6 Gm20172-201ENSMUST00000193138 1551 ntBASIC2.23□□□□□ -2.05
Upf3bQ3ULL6 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Upf3bQ3ULL6 Gm15844-201ENSMUST00000118016 576 ntBASIC2.23□□□□□ -2.05
Upf3bQ3ULL6 Gm2830-201ENSMUST00000140330 385 ntBASIC2.23□□□□□ -2.05
Upf3bQ3ULL6 Gm25334-201ENSMUST00000158036 110 ntBASIC2.23□□□□□ -2.05
Upf3bQ3ULL6 Gm22257-201ENSMUST00000158687 301 ntBASIC2.23□□□□□ -2.05
Upf3bQ3ULL6 Gm3025-201ENSMUST00000163454 489 ntBASIC2.23□□□□□ -2.05
Upf3bQ3ULL6 Gm2878-201ENSMUST00000170173 486 ntBASIC2.23□□□□□ -2.05
Upf3bQ3ULL6 Mir7050-201ENSMUST00000184636 60 ntBASIC2.23□□□□□ -2.05
Upf3bQ3ULL6 Gm7871-201ENSMUST00000195346 618 ntBASIC2.23□□□□□ -2.05
Upf3bQ3ULL6 Igkv13-64-201ENSMUST00000198143 343 ntBASIC2.23□□□□□ -2.05
Upf3bQ3ULL6 AC154296.1-201ENSMUST00000198150 67 ntBASIC2.23□□□□□ -2.05
Upf3bQ3ULL6 Gm19649-201ENSMUST00000201126 822 ntBASIC2.23□□□□□ -2.05
Upf3bQ3ULL6 Gm44058-201ENSMUST00000204335 467 ntBASIC2.23□□□□□ -2.05
Upf3bQ3ULL6 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC2.23□□□□□ -2.05
Upf3bQ3ULL6 CT573422.1-201ENSMUST00000216655 405 ntBASIC2.23□□□□□ -2.05
Upf3bQ3ULL6 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Upf3bQ3ULL6 Gm22978-201ENSMUST00000082607 160 ntBASIC2.23□□□□□ -2.05
Upf3bQ3ULL6 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.23□□□□□ -2.05
Upf3bQ3ULL6 Gm650-201ENSMUST00000144428 1551 ntBASIC2.23□□□□□ -2.05
Upf3bQ3ULL6 Gm5596-201ENSMUST00000207988 2421 ntBASIC2.22□□□□□ -2.05
Upf3bQ3ULL6 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Upf3bQ3ULL6 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Upf3bQ3ULL6 Gm13343-201ENSMUST00000116474 105 ntBASIC2.22□□□□□ -2.05
Upf3bQ3ULL6 Gm12941-201ENSMUST00000117934 220 ntBASIC2.22□□□□□ -2.05
Upf3bQ3ULL6 Gm8080-201ENSMUST00000122046 1155 ntBASIC2.22□□□□□ -2.05
Upf3bQ3ULL6 Gm26189-201ENSMUST00000179879 107 ntBASIC2.22□□□□□ -2.05
Upf3bQ3ULL6 Gm27428-201ENSMUST00000184289 110 ntBASIC2.22□□□□□ -2.05
Upf3bQ3ULL6 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC2.22□□□□□ -2.05
Upf3bQ3ULL6 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC2.22□□□□□ -2.05
Upf3bQ3ULL6 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.22□□□□□ -2.05
Upf3bQ3ULL6 CT025606.1-201ENSMUST00000218273 324 ntBASIC2.22□□□□□ -2.05
Upf3bQ3ULL6 Gm18242-201ENSMUST00000218455 542 ntBASIC2.22□□□□□ -2.05
Upf3bQ3ULL6 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC2.22□□□□□ -2.05
Upf3bQ3ULL6 Gm9762-201ENSMUST00000036976 444 ntBASIC2.22□□□□□ -2.05
Upf3bQ3ULL6 Gm24948-201ENSMUST00000082866 207 ntBASIC2.22□□□□□ -2.05
Upf3bQ3ULL6 Mir30d-201ENSMUST00000083503 82 ntBASIC2.22□□□□□ -2.05
Upf3bQ3ULL6 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Upf3bQ3ULL6 AC115891.1-201ENSMUST00000215798 1755 ntBASIC2.22□□□□□ -2.05
Upf3bQ3ULL6 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.05
Upf3bQ3ULL6 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC2.21□□□□□ -2.06
Upf3bQ3ULL6 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.21□□□□□ -2.06
Upf3bQ3ULL6 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Upf3bQ3ULL6 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.21□□□□□ -2.06
Upf3bQ3ULL6 Gm15846-201ENSMUST00000116022 320 ntBASIC2.21□□□□□ -2.06
Upf3bQ3ULL6 Gm15760-201ENSMUST00000119553 283 ntBASIC2.21□□□□□ -2.06
Upf3bQ3ULL6 Gm14588-201ENSMUST00000119895 172 ntBASIC2.21□□□□□ -2.06
Upf3bQ3ULL6 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Upf3bQ3ULL6 Gm17064-201ENSMUST00000167690 452 ntBASIC2.21□□□□□ -2.06
Upf3bQ3ULL6 Mir5118-201ENSMUST00000175551 67 ntBASIC2.21□□□□□ -2.06
Upf3bQ3ULL6 Gm24754-201ENSMUST00000177997 107 ntBASIC2.21□□□□□ -2.06
Upf3bQ3ULL6 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC2.21□□□□□ -2.06
Upf3bQ3ULL6 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Upf3bQ3ULL6 Gm38281-201ENSMUST00000192301 315 ntBASIC2.21□□□□□ -2.06
Upf3bQ3ULL6 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Upf3bQ3ULL6 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC2.21□□□□□ -2.06
Upf3bQ3ULL6 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC2.21□□□□□ -2.06
Upf3bQ3ULL6 Gm3442-201ENSMUST00000216808 710 ntBASIC2.21□□□□□ -2.06
Upf3bQ3ULL6 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.21□□□□□ -2.06
Upf3bQ3ULL6 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC2.21□□□□□ -2.06
Upf3bQ3ULL6 Gm19118-201ENSMUST00000222554 98 ntBASIC2.21□□□□□ -2.06
Upf3bQ3ULL6 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Upf3bQ3ULL6 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Upf3bQ3ULL6 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.21□□□□□ -2.06
Upf3bQ3ULL6 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Upf3bQ3ULL6 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Upf3bQ3ULL6 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Upf3bQ3ULL6 Gm24098-201ENSMUST00000102075 109 ntBASIC2.2□□□□□ -2.06
Upf3bQ3ULL6 Gm25381-201ENSMUST00000102078 109 ntBASIC2.2□□□□□ -2.06
Upf3bQ3ULL6 Gm26154-201ENSMUST00000102339 96 ntBASIC2.2□□□□□ -2.06
Upf3bQ3ULL6 Gm15536-201ENSMUST00000121411 114 ntBASIC2.2□□□□□ -2.06
Upf3bQ3ULL6 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Upf3bQ3ULL6 Gm25707-201ENSMUST00000175120 96 ntBASIC2.2□□□□□ -2.06
Upf3bQ3ULL6 Mir3103-201ENSMUST00000175474 67 ntBASIC2.2□□□□□ -2.06
Upf3bQ3ULL6 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC2.2□□□□□ -2.06
Upf3bQ3ULL6 Mir7016-201ENSMUST00000184308 72 ntBASIC2.2□□□□□ -2.06
Upf3bQ3ULL6 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Upf3bQ3ULL6 Ighv1-46-201ENSMUST00000193988 351 ntBASIC2.2□□□□□ -2.06
Upf3bQ3ULL6 Trbv18-201ENSMUST00000194256 294 ntBASIC2.2□□□□□ -2.06
Upf3bQ3ULL6 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC2.2□□□□□ -2.06
Upf3bQ3ULL6 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC2.2□□□□□ -2.06
Upf3bQ3ULL6 Mir378a-201ENSMUST00000198300 66 ntBASIC2.2□□□□□ -2.06
Upf3bQ3ULL6 Gm44391-201ENSMUST00000198490 93 ntBASIC2.2□□□□□ -2.06
Upf3bQ3ULL6 Igkv1-108-201ENSMUST00000198926 298 ntBASIC2.2□□□□□ -2.06
Upf3bQ3ULL6 Mir7217-201ENSMUST00000200304 62 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 121.5 ms