Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Col28a1Q2UY11 Gm24240-201ENSMUST00000157785 135 ntBASIC3.34□□□□□ -1.87
Col28a1Q2UY11 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC3.34□□□□□ -1.87
Col28a1Q2UY11 Gm24520-201ENSMUST00000179510 110 ntBASIC3.34□□□□□ -1.87
Col28a1Q2UY11 Gm19193-201ENSMUST00000190263 590 ntBASIC3.34□□□□□ -1.87
Col28a1Q2UY11 Mir7227-201ENSMUST00000200408 59 ntBASIC3.34□□□□□ -1.87
Col28a1Q2UY11 Gm44274-201ENSMUST00000203417 256 ntBASIC3.34□□□□□ -1.87
Col28a1Q2UY11 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC3.34□□□□□ -1.87
Col28a1Q2UY11 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.34□□□□□ -1.87
Col28a1Q2UY11 Gm44824-201ENSMUST00000207021 229 ntBASIC3.34□□□□□ -1.87
Col28a1Q2UY11 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC3.34□□□□□ -1.87
Col28a1Q2UY11 Gm19326-201ENSMUST00000219818 326 ntBASIC3.34□□□□□ -1.87
Col28a1Q2UY11 AC154328.1-201ENSMUST00000225875 307 ntBASIC3.34□□□□□ -1.87
Col28a1Q2UY11 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Col28a1Q2UY11 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC3.34□□□□□ -1.88
Col28a1Q2UY11 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
Col28a1Q2UY11 AC154634.4-201ENSMUST00000226077 2665 ntBASIC3.34□□□□□ -1.88
Col28a1Q2UY11 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Col28a1Q2UY11 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
Col28a1Q2UY11 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Col28a1Q2UY11 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Col28a1Q2UY11 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Col28a1Q2UY11 Gm24780-201ENSMUST00000157635 143 ntBASIC3.33□□□□□ -1.88
Col28a1Q2UY11 Gm25835-201ENSMUST00000158917 144 ntBASIC3.33□□□□□ -1.88
Col28a1Q2UY11 Gm16569-201ENSMUST00000160526 314 ntBASIC3.33□□□□□ -1.88
Col28a1Q2UY11 Gm16490-201ENSMUST00000165299 351 ntBASIC3.33□□□□□ -1.88
Col28a1Q2UY11 Gm22911-201ENSMUST00000177920 107 ntBASIC3.33□□□□□ -1.88
Col28a1Q2UY11 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC3.33□□□□□ -1.88
Col28a1Q2UY11 Gm27718-201ENSMUST00000183721 86 ntBASIC3.33□□□□□ -1.88
Col28a1Q2UY11 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Col28a1Q2UY11 Gm43739-201ENSMUST00000198294 307 ntBASIC3.33□□□□□ -1.88
Col28a1Q2UY11 Gm44355-201ENSMUST00000200417 104 ntBASIC3.33□□□□□ -1.88
Col28a1Q2UY11 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC3.33□□□□□ -1.88
Col28a1Q2UY11 Gm35405-201ENSMUST00000218754 400 ntBASIC3.33□□□□□ -1.88
Col28a1Q2UY11 AC158803.1-201ENSMUST00000219495 316 ntBASIC3.33□□□□□ -1.88
Col28a1Q2UY11 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC3.33□□□□□ -1.88
Col28a1Q2UY11 Gm9318-201ENSMUST00000222444 438 ntBASIC3.33□□□□□ -1.88
Col28a1Q2UY11 Gm18441-201ENSMUST00000223539 617 ntBASIC3.33□□□□□ -1.88
Col28a1Q2UY11 AC123656.2-201ENSMUST00000226726 227 ntBASIC3.33□□□□□ -1.88
Col28a1Q2UY11 Gm26447-201ENSMUST00000082448 129 ntBASIC3.33□□□□□ -1.88
Col28a1Q2UY11 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Col28a1Q2UY11 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Col28a1Q2UY11 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Col28a1Q2UY11 CT030170.3-201ENSMUST00000221205 1815 ntBASIC3.33□□□□□ -1.88
Col28a1Q2UY11 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
Col28a1Q2UY11 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Col28a1Q2UY11 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC3.32□□□□□ -1.88
Col28a1Q2UY11 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Col28a1Q2UY11 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
Col28a1Q2UY11 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
Col28a1Q2UY11 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.32□□□□□ -1.88
Col28a1Q2UY11 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.32□□□□□ -1.88
Col28a1Q2UY11 Gm24338-201ENSMUST00000104205 127 ntBASIC3.32□□□□□ -1.88
Col28a1Q2UY11 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.32□□□□□ -1.88
Col28a1Q2UY11 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC3.32□□□□□ -1.88
Col28a1Q2UY11 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Col28a1Q2UY11 Gm24784-201ENSMUST00000157640 62 ntBASIC3.32□□□□□ -1.88
Col28a1Q2UY11 Gm25666-201ENSMUST00000157702 107 ntBASIC3.32□□□□□ -1.88
Col28a1Q2UY11 Gm27579-201ENSMUST00000158113 63 ntBASIC3.32□□□□□ -1.88
Col28a1Q2UY11 Gm25520-201ENSMUST00000158389 118 ntBASIC3.32□□□□□ -1.88
Col28a1Q2UY11 Gm27903-201ENSMUST00000175482 126 ntBASIC3.32□□□□□ -1.88
Col28a1Q2UY11 Gm24464-201ENSMUST00000179697 107 ntBASIC3.32□□□□□ -1.88
Col28a1Q2UY11 Gm27249-201ENSMUST00000185049 328 ntBASIC3.32□□□□□ -1.88
Col28a1Q2UY11 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Col28a1Q2UY11 Gm45080-201ENSMUST00000206648 283 ntBASIC3.32□□□□□ -1.88
Col28a1Q2UY11 Gm45420-201ENSMUST00000211243 425 ntBASIC3.32□□□□□ -1.88
Col28a1Q2UY11 Gm45730-201ENSMUST00000212560 395 ntBASIC3.32□□□□□ -1.88
Col28a1Q2UY11 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC3.32□□□□□ -1.88
Col28a1Q2UY11 AC165092.3-201ENSMUST00000223602 282 ntBASIC3.32□□□□□ -1.88
Col28a1Q2UY11 Gm26263-201ENSMUST00000083281 164 ntBASIC3.32□□□□□ -1.88
Col28a1Q2UY11 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Col28a1Q2UY11 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
Col28a1Q2UY11 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Col28a1Q2UY11 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Col28a1Q2UY11 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Col28a1Q2UY11 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Col28a1Q2UY11 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Col28a1Q2UY11 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Col28a1Q2UY11 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
Col28a1Q2UY11 Gm37802-201ENSMUST00000194998 2643 ntBASIC3.31□□□□□ -1.88
Col28a1Q2UY11 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
Col28a1Q2UY11 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.31□□□□□ -1.88
Col28a1Q2UY11 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Col28a1Q2UY11 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Col28a1Q2UY11 Gm24831-201ENSMUST00000116778 126 ntBASIC3.31□□□□□ -1.88
Col28a1Q2UY11 Gm23988-201ENSMUST00000117034 122 ntBASIC3.31□□□□□ -1.88
Col28a1Q2UY11 Gm12137-201ENSMUST00000119565 346 ntBASIC3.31□□□□□ -1.88
Col28a1Q2UY11 Gm14101-201ENSMUST00000121502 473 ntBASIC3.31□□□□□ -1.88
Col28a1Q2UY11 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
Col28a1Q2UY11 Gm16358-201ENSMUST00000146046 210 ntBASIC3.31□□□□□ -1.88
Col28a1Q2UY11 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC3.31□□□□□ -1.88
Col28a1Q2UY11 Gm26102-201ENSMUST00000157251 284 ntBASIC3.31□□□□□ -1.88
Col28a1Q2UY11 Gm22310-201ENSMUST00000157509 116 ntBASIC3.31□□□□□ -1.88
Col28a1Q2UY11 Gm22336-201ENSMUST00000157719 107 ntBASIC3.31□□□□□ -1.88
Col28a1Q2UY11 Gm23779-201ENSMUST00000157938 64 ntBASIC3.31□□□□□ -1.88
Col28a1Q2UY11 Gm16353-201ENSMUST00000159458 1223 ntBASIC3.31□□□□□ -1.88
Col28a1Q2UY11 Gm24713-201ENSMUST00000178850 107 ntBASIC3.31□□□□□ -1.88
Col28a1Q2UY11 Gm25361-201ENSMUST00000179358 76 ntBASIC3.31□□□□□ -1.88
Col28a1Q2UY11 Gm25448-201ENSMUST00000180065 107 ntBASIC3.31□□□□□ -1.88
Col28a1Q2UY11 Ighv1-28-201ENSMUST00000192987 351 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms