Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm28634-201ENSMUST00000191087 2613 ntBASIC4.59□□□□□ -1.68
Col6a1Q04857 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
Col6a1Q04857 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
Col6a1Q04857 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
Col6a1Q04857 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Col6a1Q04857 Gm45884-201ENSMUST00000209540 3416 ntBASIC4.58□□□□□ -1.68
Col6a1Q04857 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Col6a1Q04857 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
Col6a1Q04857 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Col6a1Q04857 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
Col6a1Q04857 Gm26147-201ENSMUST00000104479 114 ntBASIC4.58□□□□□ -1.68
Col6a1Q04857 Mir105-201ENSMUST00000104655 80 ntBASIC4.58□□□□□ -1.68
Col6a1Q04857 Gm14877-201ENSMUST00000119803 478 ntBASIC4.58□□□□□ -1.68
Col6a1Q04857 Gm11448-201ENSMUST00000120427 450 ntBASIC4.58□□□□□ -1.68
Col6a1Q04857 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC4.58□□□□□ -1.68
Col6a1Q04857 Gm26045-201ENSMUST00000157862 97 ntBASIC4.58□□□□□ -1.68
Col6a1Q04857 Gm25977-201ENSMUST00000158697 85 ntBASIC4.58□□□□□ -1.68
Col6a1Q04857 Gm43586-201ENSMUST00000195948 310 ntBASIC4.58□□□□□ -1.68
Col6a1Q04857 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC4.58□□□□□ -1.68
Col6a1Q04857 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC4.58□□□□□ -1.68
Col6a1Q04857 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC4.58□□□□□ -1.68
Col6a1Q04857 Gm26121-201ENSMUST00000083364 162 ntBASIC4.58□□□□□ -1.68
Col6a1Q04857 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC4.58□□□□□ -1.68
Col6a1Q04857 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Col6a1Q04857 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Col6a1Q04857 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Col6a1Q04857 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Col6a1Q04857 Gm45131-201ENSMUST00000208051 2582 ntBASIC4.57□□□□□ -1.68
Col6a1Q04857 Gm12982-201ENSMUST00000117408 190 ntBASIC4.57□□□□□ -1.68
Col6a1Q04857 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC4.57□□□□□ -1.68
Col6a1Q04857 Mup-ps20-201ENSMUST00000121132 389 ntBASIC4.57□□□□□ -1.68
Col6a1Q04857 n-R5s192-201ENSMUST00000122577 119 ntBASIC4.57□□□□□ -1.68
Col6a1Q04857 Gm24630-201ENSMUST00000122768 106 ntBASIC4.57□□□□□ -1.68
Col6a1Q04857 Gm10059-201ENSMUST00000131139 171 ntBASIC4.57□□□□□ -1.68
Col6a1Q04857 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Col6a1Q04857 Gm22113-201ENSMUST00000158343 104 ntBASIC4.57□□□□□ -1.68
Col6a1Q04857 Gm24348-201ENSMUST00000158710 130 ntBASIC4.57□□□□□ -1.68
Col6a1Q04857 Gm7041-201ENSMUST00000201227 524 ntBASIC4.57□□□□□ -1.68
Col6a1Q04857 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Col6a1Q04857 Gm44371-201ENSMUST00000204148 467 ntBASIC4.57□□□□□ -1.68
Col6a1Q04857 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC4.57□□□□□ -1.68
Col6a1Q04857 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Col6a1Q04857 Gm37747-201ENSMUST00000193717 4003 ntBASIC4.57□□□□□ -1.68
Col6a1Q04857 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Col6a1Q04857 AC154548.1-201ENSMUST00000225844 3838 ntBASIC4.57□□□□□ -1.68
Col6a1Q04857 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Col6a1Q04857 Gm37879-201ENSMUST00000193112 1995 ntBASIC4.56□□□□□ -1.68
Col6a1Q04857 Gm17976-201ENSMUST00000184037 1909 ntBASIC4.56□□□□□ -1.68
Col6a1Q04857 AC135119.1-201ENSMUST00000227935 3717 ntBASIC4.56□□□□□ -1.68
Col6a1Q04857 Gm8744-201ENSMUST00000204475 3581 ntBASIC4.56□□□□□ -1.68
Col6a1Q04857 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Col6a1Q04857 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Col6a1Q04857 Gm24951-201ENSMUST00000102182 109 ntBASIC4.56□□□□□ -1.68
Col6a1Q04857 Gm22115-201ENSMUST00000103976 133 ntBASIC4.56□□□□□ -1.68
Col6a1Q04857 Gm23923-201ENSMUST00000104108 133 ntBASIC4.56□□□□□ -1.68
Col6a1Q04857 Gm14880-201ENSMUST00000117581 292 ntBASIC4.56□□□□□ -1.68
Col6a1Q04857 Gm14971-201ENSMUST00000117980 663 ntBASIC4.56□□□□□ -1.68
Col6a1Q04857 Gm6274-201ENSMUST00000118173 797 ntBASIC4.56□□□□□ -1.68
Col6a1Q04857 Gm15313-201ENSMUST00000119179 282 ntBASIC4.56□□□□□ -1.68
Col6a1Q04857 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC4.56□□□□□ -1.68
Col6a1Q04857 Gm26148-201ENSMUST00000157430 68 ntBASIC4.56□□□□□ -1.68
Col6a1Q04857 Gm24537-201ENSMUST00000157950 102 ntBASIC4.56□□□□□ -1.68
Col6a1Q04857 Gm23702-201ENSMUST00000158840 130 ntBASIC4.56□□□□□ -1.68
Col6a1Q04857 Mir6336-201ENSMUST00000183581 130 ntBASIC4.56□□□□□ -1.68
Col6a1Q04857 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Col6a1Q04857 Gm27421-201ENSMUST00000184729 167 ntBASIC4.56□□□□□ -1.68
Col6a1Q04857 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Col6a1Q04857 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC4.56□□□□□ -1.68
Col6a1Q04857 Gm6651-201ENSMUST00000189471 271 ntBASIC4.56□□□□□ -1.68
Col6a1Q04857 Gm28920-201ENSMUST00000189957 699 ntBASIC4.56□□□□□ -1.68
Col6a1Q04857 AC171206.2-201ENSMUST00000215252 389 ntBASIC4.56□□□□□ -1.68
Col6a1Q04857 Gm8274-201ENSMUST00000219820 463 ntBASIC4.56□□□□□ -1.68
Col6a1Q04857 AC164297.3-201ENSMUST00000224238 94 ntBASIC4.56□□□□□ -1.68
Col6a1Q04857 Gm23736-201ENSMUST00000082553 75 ntBASIC4.56□□□□□ -1.68
Col6a1Q04857 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
Col6a1Q04857 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Col6a1Q04857 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
Col6a1Q04857 Gm37461-201ENSMUST00000193929 3704 ntBASIC4.56□□□□□ -1.68
Col6a1Q04857 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Col6a1Q04857 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Col6a1Q04857 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Col6a1Q04857 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Col6a1Q04857 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
Col6a1Q04857 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Col6a1Q04857 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC4.55□□□□□ -1.68
Col6a1Q04857 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Col6a1Q04857 Gm7853-201ENSMUST00000100708 478 ntBASIC4.55□□□□□ -1.68
Col6a1Q04857 Mir687-201ENSMUST00000102166 89 ntBASIC4.55□□□□□ -1.68
Col6a1Q04857 Gm25875-201ENSMUST00000104323 107 ntBASIC4.55□□□□□ -1.68
Col6a1Q04857 Gm23705-201ENSMUST00000104370 130 ntBASIC4.55□□□□□ -1.68
Col6a1Q04857 Gm23841-201ENSMUST00000116951 114 ntBASIC4.55□□□□□ -1.68
Col6a1Q04857 Gm12640-201ENSMUST00000120097 310 ntBASIC4.55□□□□□ -1.68
Col6a1Q04857 Gm7308-201ENSMUST00000121087 447 ntBASIC4.55□□□□□ -1.68
Col6a1Q04857 Gm14694-201ENSMUST00000121856 282 ntBASIC4.55□□□□□ -1.68
Col6a1Q04857 Gm14473-201ENSMUST00000122269 557 ntBASIC4.55□□□□□ -1.68
Col6a1Q04857 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC4.55□□□□□ -1.68
Col6a1Q04857 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC4.55□□□□□ -1.68
Col6a1Q04857 Trav20-201ENSMUST00000142754 347 ntBASIC4.55□□□□□ -1.68
Col6a1Q04857 Gm26412-201ENSMUST00000157666 55 ntBASIC4.55□□□□□ -1.68
Col6a1Q04857 Gm22328-201ENSMUST00000158074 112 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 100.4 ms