Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Mir19a-201ENSMUST00000083482 82 ntBASIC2.5□□□□□ -2.01
Sox3P53784 Mir137-201ENSMUST00000083635 73 ntBASIC2.5□□□□□ -2.01
Sox3P53784 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Sox3P53784 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Sox3P53784 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Sox3P53784 Gm43780-201ENSMUST00000196510 3600 ntBASIC2.5□□□□□ -2.01
Sox3P53784 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
Sox3P53784 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.49□□□□□ -2.01
Sox3P53784 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Sox3P53784 Gm43924-201ENSMUST00000204851 1736 ntBASIC2.49□□□□□ -2.01
Sox3P53784 Gm25088-201ENSMUST00000101803 79 ntBASIC2.49□□□□□ -2.01
Sox3P53784 Gm22658-201ENSMUST00000104196 155 ntBASIC2.49□□□□□ -2.01
Sox3P53784 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC2.49□□□□□ -2.01
Sox3P53784 Gm14835-201ENSMUST00000119039 315 ntBASIC2.49□□□□□ -2.01
Sox3P53784 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC2.49□□□□□ -2.01
Sox3P53784 Gm13588-201ENSMUST00000120026 135 ntBASIC2.49□□□□□ -2.01
Sox3P53784 Gm22073-201ENSMUST00000122668 189 ntBASIC2.49□□□□□ -2.01
Sox3P53784 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC2.49□□□□□ -2.01
Sox3P53784 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC2.49□□□□□ -2.01
Sox3P53784 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC2.49□□□□□ -2.01
Sox3P53784 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC2.49□□□□□ -2.01
Sox3P53784 Gm24713-201ENSMUST00000178850 107 ntBASIC2.49□□□□□ -2.01
Sox3P53784 Gm25448-201ENSMUST00000180065 107 ntBASIC2.49□□□□□ -2.01
Sox3P53784 Gm29658-201ENSMUST00000185404 230 ntBASIC2.49□□□□□ -2.01
Sox3P53784 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Sox3P53784 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Sox3P53784 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC2.49□□□□□ -2.01
Sox3P53784 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC2.49□□□□□ -2.01
Sox3P53784 Gm44061-201ENSMUST00000203962 1195 ntBASIC2.49□□□□□ -2.01
Sox3P53784 Gm34701-202ENSMUST00000204685 360 ntBASIC2.49□□□□□ -2.01
Sox3P53784 Gm44903-201ENSMUST00000206840 130 ntBASIC2.49□□□□□ -2.01
Sox3P53784 Gm45049-201ENSMUST00000207586 591 ntBASIC2.49□□□□□ -2.01
Sox3P53784 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC2.49□□□□□ -2.01
Sox3P53784 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Sox3P53784 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC2.49□□□□□ -2.01
Sox3P53784 AC101984.1-201ENSMUST00000219639 402 ntBASIC2.49□□□□□ -2.01
Sox3P53784 AC192616.1-201ENSMUST00000221922 132 ntBASIC2.49□□□□□ -2.01
Sox3P53784 CT030238.4-201ENSMUST00000228579 801 ntBASIC2.49□□□□□ -2.01
Sox3P53784 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Sox3P53784 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Sox3P53784 Gm9174-201ENSMUST00000078149 255 ntBASIC2.49□□□□□ -2.01
Sox3P53784 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Sox3P53784 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
Sox3P53784 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
Sox3P53784 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Sox3P53784 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Sox3P53784 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Sox3P53784 Gm12044-201ENSMUST00000120335 213 ntBASIC2.48□□□□□ -2.01
Sox3P53784 Gm15536-201ENSMUST00000121411 114 ntBASIC2.48□□□□□ -2.01
Sox3P53784 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC2.48□□□□□ -2.01
Sox3P53784 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC2.48□□□□□ -2.01
Sox3P53784 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC2.48□□□□□ -2.01
Sox3P53784 Gm23317-201ENSMUST00000157999 129 ntBASIC2.48□□□□□ -2.01
Sox3P53784 Gm26406-201ENSMUST00000158503 124 ntBASIC2.48□□□□□ -2.01
Sox3P53784 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC2.48□□□□□ -2.01
Sox3P53784 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC2.48□□□□□ -2.01
Sox3P53784 Mir3066-201ENSMUST00000175296 83 ntBASIC2.48□□□□□ -2.01
Sox3P53784 Gm18396-201ENSMUST00000177095 361 ntBASIC2.48□□□□□ -2.01
Sox3P53784 Gm22584-201ENSMUST00000177935 92 ntBASIC2.48□□□□□ -2.01
Sox3P53784 Mir6406-201ENSMUST00000183592 120 ntBASIC2.48□□□□□ -2.01
Sox3P53784 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC2.48□□□□□ -2.01
Sox3P53784 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC2.48□□□□□ -2.01
Sox3P53784 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC2.48□□□□□ -2.01
Sox3P53784 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.48□□□□□ -2.01
Sox3P53784 Gm17850-201ENSMUST00000210023 1154 ntBASIC2.48□□□□□ -2.01
Sox3P53784 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC2.48□□□□□ -2.01
Sox3P53784 AC122484.1-201ENSMUST00000221578 177 ntBASIC2.48□□□□□ -2.01
Sox3P53784 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC2.48□□□□□ -2.01
Sox3P53784 AC102352.1-201ENSMUST00000224187 582 ntBASIC2.48□□□□□ -2.01
Sox3P53784 AC241593.1-201ENSMUST00000224768 397 ntBASIC2.48□□□□□ -2.01
Sox3P53784 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.48□□□□□ -2.01
Sox3P53784 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Sox3P53784 Gm23264-201ENSMUST00000083372 107 ntBASIC2.48□□□□□ -2.01
Sox3P53784 Mir410-201ENSMUST00000083563 81 ntBASIC2.48□□□□□ -2.01
Sox3P53784 Gm5670-201ENSMUST00000093546 372 ntBASIC2.48□□□□□ -2.01
Sox3P53784 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Sox3P53784 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Sox3P53784 Gm38211-201ENSMUST00000192814 7217 ntBASIC2.48□□□□□ -2.01
Sox3P53784 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Sox3P53784 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Sox3P53784 Gm43326-201ENSMUST00000198459 1638 ntBASIC2.47□□□□□ -2.01
Sox3P53784 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Sox3P53784 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Sox3P53784 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Sox3P53784 Gm24907-201ENSMUST00000116932 128 ntBASIC2.47□□□□□ -2.01
Sox3P53784 Gm13439-201ENSMUST00000117541 409 ntBASIC2.47□□□□□ -2.01
Sox3P53784 Gm14945-201ENSMUST00000119556 1118 ntBASIC2.47□□□□□ -2.01
Sox3P53784 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC2.47□□□□□ -2.01
Sox3P53784 Gm15112-201ENSMUST00000120152 860 ntBASIC2.47□□□□□ -2.01
Sox3P53784 Gm13433-201ENSMUST00000121701 240 ntBASIC2.47□□□□□ -2.01
Sox3P53784 Gm22026-201ENSMUST00000122735 281 ntBASIC2.47□□□□□ -2.01
Sox3P53784 Gm25294-201ENSMUST00000122791 104 ntBASIC2.47□□□□□ -2.01
Sox3P53784 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC2.47□□□□□ -2.01
Sox3P53784 Gm16533-201ENSMUST00000140035 228 ntBASIC2.47□□□□□ -2.01
Sox3P53784 Gm22236-201ENSMUST00000157093 106 ntBASIC2.47□□□□□ -2.01
Sox3P53784 Gm23670-201ENSMUST00000157469 119 ntBASIC2.47□□□□□ -2.01
Sox3P53784 Gm24962-201ENSMUST00000157917 109 ntBASIC2.47□□□□□ -2.01
Sox3P53784 Gm22534-201ENSMUST00000158173 104 ntBASIC2.47□□□□□ -2.01
Sox3P53784 Gm23025-201ENSMUST00000158769 111 ntBASIC2.47□□□□□ -2.01
Sox3P53784 Gm24082-201ENSMUST00000175175 83 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 126.8 ms