Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm13541-201ENSMUST00000119519 283 ntBASIC4.41□□□□□ -1.7
Sox1P53783 Gm12704-201ENSMUST00000119789 464 ntBASIC4.41□□□□□ -1.7
Sox1P53783 Gm23184-201ENSMUST00000122594 131 ntBASIC4.41□□□□□ -1.7
Sox1P53783 Gm24008-201ENSMUST00000157733 138 ntBASIC4.41□□□□□ -1.7
Sox1P53783 Gm16326-201ENSMUST00000162843 414 ntBASIC4.41□□□□□ -1.7
Sox1P53783 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC4.41□□□□□ -1.7
Sox1P53783 Gm21893-201ENSMUST00000179119 397 ntBASIC4.41□□□□□ -1.7
Sox1P53783 Gm37239-201ENSMUST00000193510 141 ntBASIC4.41□□□□□ -1.7
Sox1P53783 Gm42647-201ENSMUST00000195939 459 ntBASIC4.41□□□□□ -1.7
Sox1P53783 Gm29704-201ENSMUST00000196011 253 ntBASIC4.41□□□□□ -1.7
Sox1P53783 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Sox1P53783 Gm42694-201ENSMUST00000196951 358 ntBASIC4.41□□□□□ -1.7
Sox1P53783 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC4.41□□□□□ -1.7
Sox1P53783 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC4.41□□□□□ -1.7
Sox1P53783 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC4.41□□□□□ -1.7
Sox1P53783 Gm44533-201ENSMUST00000207782 268 ntBASIC4.41□□□□□ -1.7
Sox1P53783 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC4.41□□□□□ -1.7
Sox1P53783 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC4.41□□□□□ -1.7
Sox1P53783 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Sox1P53783 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
Sox1P53783 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC4.41□□□□□ -1.7
Sox1P53783 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
Sox1P53783 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Sox1P53783 Gm43327-201ENSMUST00000199285 4055 ntBASIC4.41□□□□□ -1.7
Sox1P53783 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Sox1P53783 Olfr646-202ENSMUST00000214099 3778 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Sox1P53783 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Sox1P53783 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Sox1P53783 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC4.4□□□□□ -1.7
Sox1P53783 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC4.4□□□□□ -1.71
Sox1P53783 Mir680-3-201ENSMUST00000102298 87 ntBASIC4.4□□□□□ -1.71
Sox1P53783 Gm23747-201ENSMUST00000104228 131 ntBASIC4.4□□□□□ -1.71
Sox1P53783 Gm24788-201ENSMUST00000104283 156 ntBASIC4.4□□□□□ -1.71
Sox1P53783 Gm23319-201ENSMUST00000104467 131 ntBASIC4.4□□□□□ -1.71
Sox1P53783 Gm12722-201ENSMUST00000118507 493 ntBASIC4.4□□□□□ -1.71
Sox1P53783 Gm15268-201ENSMUST00000118845 352 ntBASIC4.4□□□□□ -1.71
Sox1P53783 Gm11742-201ENSMUST00000119903 233 ntBASIC4.4□□□□□ -1.71
Sox1P53783 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Sox1P53783 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Sox1P53783 Gm22337-201ENSMUST00000157721 132 ntBASIC4.4□□□□□ -1.71
Sox1P53783 Gm23964-201ENSMUST00000157966 107 ntBASIC4.4□□□□□ -1.71
Sox1P53783 Gm22611-201ENSMUST00000158288 150 ntBASIC4.4□□□□□ -1.71
Sox1P53783 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Sox1P53783 Gm23415-201ENSMUST00000175519 83 ntBASIC4.4□□□□□ -1.71
Sox1P53783 Gm22118-201ENSMUST00000175593 171 ntBASIC4.4□□□□□ -1.71
Sox1P53783 Gm28453-203ENSMUST00000187041 189 ntBASIC4.4□□□□□ -1.71
Sox1P53783 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC4.4□□□□□ -1.71
Sox1P53783 Gm43955-201ENSMUST00000204332 142 ntBASIC4.4□□□□□ -1.71
Sox1P53783 AC132465.3-201ENSMUST00000219326 195 ntBASIC4.4□□□□□ -1.71
Sox1P53783 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Sox1P53783 Gm25078-201ENSMUST00000082530 107 ntBASIC4.4□□□□□ -1.71
Sox1P53783 Gm23297-201ENSMUST00000083184 127 ntBASIC4.4□□□□□ -1.71
Sox1P53783 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC4.4□□□□□ -1.71
Sox1P53783 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
Sox1P53783 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC4.4□□□□□ -1.71
Sox1P53783 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Sox1P53783 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Sox1P53783 Gm38010-201ENSMUST00000192592 2784 ntBASIC4.39□□□□□ -1.71
Sox1P53783 Gm8674-201ENSMUST00000179367 3047 ntBASIC4.39□□□□□ -1.71
Sox1P53783 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Sox1P53783 Gm15846-201ENSMUST00000116022 320 ntBASIC4.39□□□□□ -1.71
Sox1P53783 Gm15313-201ENSMUST00000119179 282 ntBASIC4.39□□□□□ -1.71
Sox1P53783 Gm11631-201ENSMUST00000119220 156 ntBASIC4.39□□□□□ -1.71
Sox1P53783 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Sox1P53783 Gm24850-201ENSMUST00000158029 119 ntBASIC4.39□□□□□ -1.71
Sox1P53783 Gm22840-201ENSMUST00000158444 136 ntBASIC4.39□□□□□ -1.71
Sox1P53783 Gm24885-201ENSMUST00000158783 270 ntBASIC4.39□□□□□ -1.71
Sox1P53783 Gm24264-201ENSMUST00000179835 94 ntBASIC4.39□□□□□ -1.71
Sox1P53783 Mir7676-1-201ENSMUST00000183491 62 ntBASIC4.39□□□□□ -1.71
Sox1P53783 Mir7676-2-201ENSMUST00000183523 62 ntBASIC4.39□□□□□ -1.71
Sox1P53783 Gm37050-201ENSMUST00000193464 466 ntBASIC4.39□□□□□ -1.71
Sox1P53783 Gm43402-201ENSMUST00000197159 159 ntBASIC4.39□□□□□ -1.71
Sox1P53783 Gm44859-201ENSMUST00000207831 94 ntBASIC4.39□□□□□ -1.71
Sox1P53783 Gm35857-201ENSMUST00000212739 178 ntBASIC4.39□□□□□ -1.71
Sox1P53783 AC127270.2-201ENSMUST00000221337 247 ntBASIC4.39□□□□□ -1.71
Sox1P53783 n-R5s205-201ENSMUST00000083149 125 ntBASIC4.39□□□□□ -1.71
Sox1P53783 Mir32-201ENSMUST00000083610 70 ntBASIC4.39□□□□□ -1.71
Sox1P53783 Mir181b-2-201ENSMUST00000083644 89 ntBASIC4.39□□□□□ -1.71
Sox1P53783 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
Sox1P53783 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC4.39□□□□□ -1.71
Sox1P53783 Gm9911-201ENSMUST00000211467 2802 ntBASIC4.39□□□□□ -1.71
Sox1P53783 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Sox1P53783 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Sox1P53783 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Sox1P53783 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Sox1P53783 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Sox1P53783 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC4.38□□□□□ -1.71
Sox1P53783 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
Sox1P53783 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Sox1P53783 Gm37781-201ENSMUST00000194773 3218 ntBASIC4.38□□□□□ -1.71
Sox1P53783 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Sox1P53783 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Sox1P53783 AC122840.2-201ENSMUST00000221030 2659 ntBASIC4.38□□□□□ -1.71
Sox1P53783 Gm16032-201ENSMUST00000118534 168 ntBASIC4.38□□□□□ -1.71
Sox1P53783 Gm6574-201ENSMUST00000120037 362 ntBASIC4.38□□□□□ -1.71
Sox1P53783 Gm13581-201ENSMUST00000120675 278 ntBASIC4.38□□□□□ -1.71
Sox1P53783 Gm25783-201ENSMUST00000122525 190 ntBASIC4.38□□□□□ -1.71
Sox1P53783 Gm26414-201ENSMUST00000157674 269 ntBASIC4.38□□□□□ -1.71
Sox1P53783 Mir6996-201ENSMUST00000183922 61 ntBASIC4.38□□□□□ -1.71
Sox1P53783 Gm27477-201ENSMUST00000184649 143 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms