Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC1.03□□□□□ -2.24
HttP42859 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC1.03□□□□□ -2.24
HttP42859 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC1.03□□□□□ -2.24
HttP42859 AC027184.1-201ENSMUST00000226991 424 ntBASIC1.03□□□□□ -2.24
HttP42859 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
HttP42859 Gm24920-201ENSMUST00000083018 85 ntBASIC1.03□□□□□ -2.24
HttP42859 Gm43047-201ENSMUST00000200089 3460 ntBASIC1.03□□□□□ -2.24
HttP42859 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
HttP42859 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
HttP42859 Gm25106-201ENSMUST00000122672 134 ntBASIC1.03□□□□□ -2.24
HttP42859 Gm9071-201ENSMUST00000165915 474 ntBASIC1.03□□□□□ -2.24
HttP42859 Gm23355-201ENSMUST00000177614 107 ntBASIC1.03□□□□□ -2.24
HttP42859 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC1.03□□□□□ -2.24
HttP42859 Gm27587-201ENSMUST00000185116 163 ntBASIC1.03□□□□□ -2.24
HttP42859 Gm43925-201ENSMUST00000203498 206 ntBASIC1.03□□□□□ -2.24
HttP42859 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC1.03□□□□□ -2.24
HttP42859 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC1.03□□□□□ -2.24
HttP42859 Gm23721-201ENSMUST00000083005 107 ntBASIC1.03□□□□□ -2.24
HttP42859 Gm42671-201ENSMUST00000198013 1604 ntBASIC1.03□□□□□ -2.24
HttP42859 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC1.02□□□□□ -2.25
HttP42859 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC1.02□□□□□ -2.25
HttP42859 Gm43944-201ENSMUST00000205220 120 ntBASIC1.02□□□□□ -2.25
HttP42859 Gm44585-201ENSMUST00000207150 607 ntBASIC1.02□□□□□ -2.25
HttP42859 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC1.02□□□□□ -2.25
HttP42859 Mir6995-201ENSMUST00000183658 71 ntBASIC1.02□□□□□ -2.25
HttP42859 Gm28974-201ENSMUST00000187893 231 ntBASIC1.02□□□□□ -2.25
HttP42859 Mir196a-2-201ENSMUST00000083554 85 ntBASIC1.02□□□□□ -2.25
HttP42859 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC1.02□□□□□ -2.25
HttP42859 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC1.02□□□□□ -2.25
HttP42859 Defa-ps6-201ENSMUST00000122172 282 ntBASIC1.02□□□□□ -2.25
HttP42859 Gm22521-201ENSMUST00000158272 134 ntBASIC1.02□□□□□ -2.25
HttP42859 Gm9402-201ENSMUST00000196849 388 ntBASIC1.02□□□□□ -2.25
HttP42859 Gm22980-201ENSMUST00000082608 70 ntBASIC1.02□□□□□ -2.25
HttP42859 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
HttP42859 Gm26171-201ENSMUST00000158422 131 ntBASIC1.01□□□□□ -2.25
HttP42859 Gm17538-201ENSMUST00000168236 327 ntBASIC1.01□□□□□ -2.25
HttP42859 Gm27952-201ENSMUST00000184748 105 ntBASIC1.01□□□□□ -2.25
HttP42859 Gm37428-201ENSMUST00000193886 137 ntBASIC1.01□□□□□ -2.25
HttP42859 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC1.01□□□□□ -2.25
HttP42859 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC1.01□□□□□ -2.25
HttP42859 Ear14-201ENSMUST00000049559 468 ntBASIC1.01□□□□□ -2.25
HttP42859 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
HttP42859 Gm9440-201ENSMUST00000119667 539 ntBASIC1.01□□□□□ -2.25
HttP42859 Gm16411-201ENSMUST00000122164 1100 ntBASIC1.01□□□□□ -2.25
HttP42859 Gm38231-201ENSMUST00000192030 347 ntBASIC1.01□□□□□ -2.25
HttP42859 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC1.01□□□□□ -2.25
HttP42859 Mir3096-201ENSMUST00000116685 71 ntBASIC1□□□□□ -2.25
HttP42859 Gm21885-201ENSMUST00000178891 327 ntBASIC1□□□□□ -2.25
HttP42859 AC153529.1-201ENSMUST00000217818 370 ntBASIC1□□□□□ -2.25
HttP42859 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC1□□□□□ -2.25
HttP42859 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC1□□□□□ -2.25
HttP42859 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC1□□□□□ -2.25
HttP42859 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC1□□□□□ -2.25
HttP42859 Gm43070-201ENSMUST00000196938 415 ntBASIC1□□□□□ -2.25
HttP42859 AC171206.1-201ENSMUST00000213612 213 ntBASIC1□□□□□ -2.25
HttP42859 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC1□□□□□ -2.25
HttP42859 AC124433.2-201ENSMUST00000223867 291 ntBASIC1□□□□□ -2.25
HttP42859 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC1□□□□□ -2.25
HttP42859 n-R5s196-201ENSMUST00000083136 117 ntBASIC1□□□□□ -2.25
HttP42859 Gm42942-201ENSMUST00000196086 1328 ntBASIC0.99□□□□□ -2.25
HttP42859 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
HttP42859 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC0.99□□□□□ -2.25
HttP42859 Gm14678-201ENSMUST00000121396 482 ntBASIC0.99□□□□□ -2.25
HttP42859 Gm14491-201ENSMUST00000121919 199 ntBASIC0.99□□□□□ -2.25
HttP42859 Gm25885-201ENSMUST00000157779 109 ntBASIC0.99□□□□□ -2.25
HttP42859 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
HttP42859 Gm26285-201ENSMUST00000177923 107 ntBASIC0.99□□□□□ -2.25
HttP42859 Gm27233-201ENSMUST00000184030 307 ntBASIC0.99□□□□□ -2.25
HttP42859 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
HttP42859 Gm23622-201ENSMUST00000082460 107 ntBASIC0.99□□□□□ -2.25
HttP42859 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
HttP42859 AC164297.6-201ENSMUST00000224643 1568 ntBASIC0.98□□□□□ -2.25
HttP42859 Mir878-201ENSMUST00000104680 78 ntBASIC0.98□□□□□ -2.25
HttP42859 Gm12985-201ENSMUST00000118376 183 ntBASIC0.98□□□□□ -2.25
HttP42859 Gm16363-201ENSMUST00000132460 877 ntBASIC0.98□□□□□ -2.25
HttP42859 Gm46994-201ENSMUST00000221523 219 ntBASIC0.98□□□□□ -2.25
HttP42859 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC0.98□□□□□ -2.25
HttP42859 Mir223-201ENSMUST00000102112 110 ntBASIC0.98□□□□□ -2.25
HttP42859 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
HttP42859 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC0.98□□□□□ -2.25
HttP42859 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
HttP42859 Gm23735-201ENSMUST00000082551 134 ntBASIC0.98□□□□□ -2.25
HttP42859 Gm14669-201ENSMUST00000118841 250 ntBASIC0.98□□□□□ -2.25
HttP42859 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC0.98□□□□□ -2.25
HttP42859 Gm22817-201ENSMUST00000157448 356 ntBASIC0.98□□□□□ -2.25
HttP42859 Gm20641-201ENSMUST00000176069 615 ntTSL 3 BASIC0.98□□□□□ -2.25
HttP42859 Gm38281-201ENSMUST00000192301 315 ntBASIC0.97□□□□□ -2.25
HttP42859 AC154511.1-201ENSMUST00000222578 1587 ntBASIC0.97□□□□□ -2.25
HttP42859 Gm23924-201ENSMUST00000082474 108 ntBASIC0.97□□□□□ -2.25
HttP42859 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC0.97□□□□□ -2.25
HttP42859 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
HttP42859 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC0.97□□□□□ -2.25
HttP42859 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC0.97□□□□□ -2.25
HttP42859 Gm25110-201ENSMUST00000116684 121 ntBASIC0.97□□□□□ -2.25
HttP42859 Gm25775-201ENSMUST00000116716 121 ntBASIC0.97□□□□□ -2.25
HttP42859 Gm24795-201ENSMUST00000116737 121 ntBASIC0.97□□□□□ -2.25
HttP42859 Gm25171-201ENSMUST00000116926 121 ntBASIC0.97□□□□□ -2.25
HttP42859 Gm24811-201ENSMUST00000175313 100 ntBASIC0.97□□□□□ -2.25
HttP42859 Gm25596-201ENSMUST00000178368 107 ntBASIC0.97□□□□□ -2.25
HttP42859 Gm22862-201ENSMUST00000178593 121 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 91.9 ms