Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.05□□□□□ -2.08
Sdc1P18828 Gm19140-201ENSMUST00000209790 421 ntBASIC2.05□□□□□ -2.08
Sdc1P18828 Gm8940-201ENSMUST00000212585 219 ntBASIC2.05□□□□□ -2.08
Sdc1P18828 Gm45772-201ENSMUST00000212961 240 ntBASIC2.05□□□□□ -2.08
Sdc1P18828 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC2.05□□□□□ -2.08
Sdc1P18828 AC142499.1-201ENSMUST00000220036 374 ntBASIC2.05□□□□□ -2.08
Sdc1P18828 AC122341.1-201ENSMUST00000227291 560 ntBASIC2.05□□□□□ -2.08
Sdc1P18828 Gm5471-201ENSMUST00000072732 337 ntBASIC2.05□□□□□ -2.08
Sdc1P18828 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC2.05□□□□□ -2.08
Sdc1P18828 Gm22154-201ENSMUST00000083844 131 ntBASIC2.05□□□□□ -2.08
Sdc1P18828 Gm10343-201ENSMUST00000096279 348 ntBASIC2.05□□□□□ -2.08
Sdc1P18828 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.05□□□□□ -2.08
Sdc1P18828 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.04□□□□□ -2.08
Sdc1P18828 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.04□□□□□ -2.08
Sdc1P18828 Mup-ps20-201ENSMUST00000121132 389 ntBASIC2.04□□□□□ -2.08
Sdc1P18828 Gm22143-201ENSMUST00000157401 203 ntBASIC2.04□□□□□ -2.08
Sdc1P18828 Gm24008-201ENSMUST00000157733 138 ntBASIC2.04□□□□□ -2.08
Sdc1P18828 Gm23078-201ENSMUST00000157848 148 ntBASIC2.04□□□□□ -2.08
Sdc1P18828 Gm17062-201ENSMUST00000166987 461 ntBASIC2.04□□□□□ -2.08
Sdc1P18828 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Sdc1P18828 Gm24304-201ENSMUST00000177635 107 ntBASIC2.04□□□□□ -2.08
Sdc1P18828 Gm15084-201ENSMUST00000178585 1502 ntBASIC2.04□□□□□ -2.08
Sdc1P18828 Gm25360-201ENSMUST00000178786 191 ntBASIC2.04□□□□□ -2.08
Sdc1P18828 Gm27753-201ENSMUST00000184742 203 ntBASIC2.04□□□□□ -2.08
Sdc1P18828 Mir6975-201ENSMUST00000184879 61 ntBASIC2.04□□□□□ -2.08
Sdc1P18828 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC2.04□□□□□ -2.08
Sdc1P18828 Gm37455-201ENSMUST00000191993 529 ntBASIC2.04□□□□□ -2.08
Sdc1P18828 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC2.04□□□□□ -2.08
Sdc1P18828 Gm44472-201ENSMUST00000204922 943 ntBASIC2.04□□□□□ -2.08
Sdc1P18828 Gm46103-201ENSMUST00000217614 341 ntBASIC2.04□□□□□ -2.08
Sdc1P18828 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Sdc1P18828 Gm25592-201ENSMUST00000082635 131 ntBASIC2.04□□□□□ -2.08
Sdc1P18828 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC2.04□□□□□ -2.08
Sdc1P18828 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Sdc1P18828 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Sdc1P18828 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC2.03□□□□□ -2.08
Sdc1P18828 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Sdc1P18828 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Sdc1P18828 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
Sdc1P18828 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Sdc1P18828 Gm26154-201ENSMUST00000102339 96 ntBASIC2.03□□□□□ -2.08
Sdc1P18828 Gm22936-201ENSMUST00000103955 126 ntBASIC2.03□□□□□ -2.08
Sdc1P18828 Gm23744-201ENSMUST00000104231 149 ntBASIC2.03□□□□□ -2.08
Sdc1P18828 Gm25500-201ENSMUST00000104426 123 ntBASIC2.03□□□□□ -2.08
Sdc1P18828 Gm13876-201ENSMUST00000118451 261 ntBASIC2.03□□□□□ -2.08
Sdc1P18828 Gm11357-201ENSMUST00000119758 954 ntBASIC2.03□□□□□ -2.08
Sdc1P18828 Gm25321-201ENSMUST00000122558 102 ntBASIC2.03□□□□□ -2.08
Sdc1P18828 Gm16355-201ENSMUST00000128606 231 ntBASIC2.03□□□□□ -2.08
Sdc1P18828 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.03□□□□□ -2.08
Sdc1P18828 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC2.03□□□□□ -2.08
Sdc1P18828 Gm26271-201ENSMUST00000158349 104 ntBASIC2.03□□□□□ -2.08
Sdc1P18828 Gm24878-201ENSMUST00000158782 104 ntBASIC2.03□□□□□ -2.08
Sdc1P18828 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.03□□□□□ -2.08
Sdc1P18828 Gm17085-201ENSMUST00000165425 502 ntBASIC2.03□□□□□ -2.08
Sdc1P18828 Gm24713-201ENSMUST00000178850 107 ntBASIC2.03□□□□□ -2.08
Sdc1P18828 Gm24897-201ENSMUST00000179033 107 ntBASIC2.03□□□□□ -2.08
Sdc1P18828 Gm25448-201ENSMUST00000180065 107 ntBASIC2.03□□□□□ -2.08
Sdc1P18828 Gm5329-201ENSMUST00000186898 463 ntBASIC2.03□□□□□ -2.08
Sdc1P18828 Gm28917-201ENSMUST00000187294 237 ntBASIC2.03□□□□□ -2.08
Sdc1P18828 Gm28766-201ENSMUST00000191086 234 ntBASIC2.03□□□□□ -2.08
Sdc1P18828 Gm20915-201ENSMUST00000191575 663 ntBASIC2.03□□□□□ -2.08
Sdc1P18828 Gm42647-201ENSMUST00000195939 459 ntBASIC2.03□□□□□ -2.08
Sdc1P18828 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.03□□□□□ -2.08
Sdc1P18828 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC2.03□□□□□ -2.08
Sdc1P18828 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC2.03□□□□□ -2.08
Sdc1P18828 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.03□□□□□ -2.08
Sdc1P18828 Gm44459-201ENSMUST00000203926 160 ntBASIC2.03□□□□□ -2.08
Sdc1P18828 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Sdc1P18828 Gm46389-201ENSMUST00000223199 392 ntBASIC2.03□□□□□ -2.08
Sdc1P18828 AC183096.1-201ENSMUST00000226392 130 ntBASIC2.03□□□□□ -2.08
Sdc1P18828 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Sdc1P18828 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.03□□□□□ -2.08
Sdc1P18828 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
Sdc1P18828 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC2.02□□□□□ -2.09
Sdc1P18828 Gm22151-201ENSMUST00000116963 58 ntBASIC2.02□□□□□ -2.09
Sdc1P18828 Gm12636-201ENSMUST00000117395 624 ntBASIC2.02□□□□□ -2.09
Sdc1P18828 Gm13355-201ENSMUST00000117996 317 ntBASIC2.02□□□□□ -2.09
Sdc1P18828 Gm13880-201ENSMUST00000118421 474 ntBASIC2.02□□□□□ -2.09
Sdc1P18828 Gm12372-201ENSMUST00000121654 768 ntBASIC2.02□□□□□ -2.09
Sdc1P18828 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC2.02□□□□□ -2.09
Sdc1P18828 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC2.02□□□□□ -2.09
Sdc1P18828 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC2.02□□□□□ -2.09
Sdc1P18828 Mir5101-201ENSMUST00000175181 83 ntBASIC2.02□□□□□ -2.09
Sdc1P18828 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC2.02□□□□□ -2.09
Sdc1P18828 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC2.02□□□□□ -2.09
Sdc1P18828 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Sdc1P18828 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC2.02□□□□□ -2.09
Sdc1P18828 Gm43804-201ENSMUST00000198280 456 ntBASIC2.02□□□□□ -2.09
Sdc1P18828 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC2.02□□□□□ -2.09
Sdc1P18828 Gm44050-201ENSMUST00000204263 527 ntBASIC2.02□□□□□ -2.09
Sdc1P18828 Gm44964-201ENSMUST00000207011 273 ntBASIC2.02□□□□□ -2.09
Sdc1P18828 Gm10297-201ENSMUST00000207136 651 ntBASIC2.02□□□□□ -2.09
Sdc1P18828 Gm45791-201ENSMUST00000212908 352 ntBASIC2.02□□□□□ -2.09
Sdc1P18828 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC2.02□□□□□ -2.09
Sdc1P18828 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Sdc1P18828 AC107757.3-201ENSMUST00000226312 535 ntBASIC2.02□□□□□ -2.09
Sdc1P18828 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Sdc1P18828 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Sdc1P18828 Gm24313-201ENSMUST00000082561 133 ntBASIC2.02□□□□□ -2.09
Sdc1P18828 Gm25582-201ENSMUST00000083412 110 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 92.4 ms