Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm12607-201ENSMUST00000120724 493 ntBASIC2.11□□□□□ -2.07
Cdx1P18111 Gm14821-201ENSMUST00000121975 435 ntBASIC2.11□□□□□ -2.07
Cdx1P18111 Gm14629-201ENSMUST00000122428 144 ntBASIC2.11□□□□□ -2.07
Cdx1P18111 Gm24716-201ENSMUST00000157524 104 ntBASIC2.11□□□□□ -2.07
Cdx1P18111 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC2.11□□□□□ -2.07
Cdx1P18111 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC2.11□□□□□ -2.07
Cdx1P18111 Gm24754-201ENSMUST00000177997 107 ntBASIC2.11□□□□□ -2.07
Cdx1P18111 Gm25360-201ENSMUST00000178786 191 ntBASIC2.11□□□□□ -2.07
Cdx1P18111 Gm27676-201ENSMUST00000183669 61 ntBASIC2.11□□□□□ -2.07
Cdx1P18111 Gm17929-201ENSMUST00000186851 627 ntBASIC2.11□□□□□ -2.07
Cdx1P18111 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Cdx1P18111 Gm43722-201ENSMUST00000196054 124 ntBASIC2.11□□□□□ -2.07
Cdx1P18111 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC2.11□□□□□ -2.07
Cdx1P18111 Mir7232-201ENSMUST00000197929 74 ntBASIC2.11□□□□□ -2.07
Cdx1P18111 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC2.11□□□□□ -2.07
Cdx1P18111 Gm43626-201ENSMUST00000198575 162 ntBASIC2.11□□□□□ -2.07
Cdx1P18111 Gm44526-201ENSMUST00000204664 121 ntBASIC2.11□□□□□ -2.07
Cdx1P18111 Gm44688-201ENSMUST00000209083 537 ntBASIC2.11□□□□□ -2.07
Cdx1P18111 Gm8940-201ENSMUST00000212585 219 ntBASIC2.11□□□□□ -2.07
Cdx1P18111 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.11□□□□□ -2.07
Cdx1P18111 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC2.11□□□□□ -2.07
Cdx1P18111 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Cdx1P18111 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Cdx1P18111 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Cdx1P18111 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Cdx1P18111 Gm10025-201ENSMUST00000079568 372 ntBASIC2.11□□□□□ -2.07
Cdx1P18111 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Cdx1P18111 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.11□□□□□ -2.07
Cdx1P18111 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Cdx1P18111 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Cdx1P18111 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Cdx1P18111 Gm11784-201ENSMUST00000118568 474 ntBASIC2.1□□□□□ -2.07
Cdx1P18111 Gm12825-201ENSMUST00000120249 563 ntBASIC2.1□□□□□ -2.07
Cdx1P18111 Gm16355-201ENSMUST00000128606 231 ntBASIC2.1□□□□□ -2.07
Cdx1P18111 Gm14333-201ENSMUST00000130484 264 ntBASIC2.1□□□□□ -2.07
Cdx1P18111 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.1□□□□□ -2.07
Cdx1P18111 Gm25961-201ENSMUST00000157174 135 ntBASIC2.1□□□□□ -2.07
Cdx1P18111 Gm22141-201ENSMUST00000157403 277 ntBASIC2.1□□□□□ -2.07
Cdx1P18111 Gm23325-201ENSMUST00000157422 129 ntBASIC2.1□□□□□ -2.07
Cdx1P18111 Gm3025-201ENSMUST00000163454 489 ntBASIC2.1□□□□□ -2.07
Cdx1P18111 Gm2878-201ENSMUST00000170173 486 ntBASIC2.1□□□□□ -2.07
Cdx1P18111 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC2.1□□□□□ -2.07
Cdx1P18111 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC2.1□□□□□ -2.07
Cdx1P18111 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC2.1□□□□□ -2.07
Cdx1P18111 Gm37751-201ENSMUST00000192440 1198 ntBASIC2.1□□□□□ -2.07
Cdx1P18111 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC2.1□□□□□ -2.07
Cdx1P18111 Gm43007-201ENSMUST00000197618 291 ntBASIC2.1□□□□□ -2.07
Cdx1P18111 Gm44324-201ENSMUST00000198517 135 ntBASIC2.1□□□□□ -2.07
Cdx1P18111 Mir3069-201ENSMUST00000198802 65 ntBASIC2.1□□□□□ -2.07
Cdx1P18111 Gm34314-201ENSMUST00000203622 367 ntBASIC2.1□□□□□ -2.07
Cdx1P18111 Gm43992-201ENSMUST00000204358 197 ntBASIC2.1□□□□□ -2.07
Cdx1P18111 AC131085.1-201ENSMUST00000224746 656 ntBASIC2.1□□□□□ -2.07
Cdx1P18111 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Cdx1P18111 Gm25257-201ENSMUST00000083907 110 ntBASIC2.1□□□□□ -2.07
Cdx1P18111 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Cdx1P18111 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.07
Cdx1P18111 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Cdx1P18111 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Cdx1P18111 Gm14868-201ENSMUST00000117840 216 ntBASIC2.09□□□□□ -2.07
Cdx1P18111 Gm6664-201ENSMUST00000119138 468 ntBASIC2.09□□□□□ -2.07
Cdx1P18111 Gm15112-201ENSMUST00000120152 860 ntBASIC2.09□□□□□ -2.07
Cdx1P18111 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC2.09□□□□□ -2.07
Cdx1P18111 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC2.09□□□□□ -2.07
Cdx1P18111 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC2.09□□□□□ -2.07
Cdx1P18111 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC2.09□□□□□ -2.07
Cdx1P18111 Gm23324-201ENSMUST00000157421 131 ntBASIC2.09□□□□□ -2.07
Cdx1P18111 Gm25220-201ENSMUST00000157546 95 ntBASIC2.09□□□□□ -2.07
Cdx1P18111 Gm26177-201ENSMUST00000178683 107 ntBASIC2.09□□□□□ -2.07
Cdx1P18111 Mir7667-201ENSMUST00000183866 63 ntBASIC2.09□□□□□ -2.07
Cdx1P18111 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC2.09□□□□□ -2.07
Cdx1P18111 Gm37319-201ENSMUST00000193500 636 ntBASIC2.09□□□□□ -2.07
Cdx1P18111 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC2.09□□□□□ -2.07
Cdx1P18111 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC2.09□□□□□ -2.07
Cdx1P18111 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.09□□□□□ -2.07
Cdx1P18111 Gm44472-201ENSMUST00000204922 943 ntBASIC2.09□□□□□ -2.07
Cdx1P18111 Gm35558-202ENSMUST00000221819 499 ntBASIC2.09□□□□□ -2.07
Cdx1P18111 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC2.09□□□□□ -2.07
Cdx1P18111 Gm7065-201ENSMUST00000222150 474 ntBASIC2.09□□□□□ -2.07
Cdx1P18111 Gm22061-201ENSMUST00000082557 107 ntBASIC2.09□□□□□ -2.07
Cdx1P18111 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.09□□□□□ -2.08
Cdx1P18111 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
Cdx1P18111 Gm14197-201ENSMUST00000117480 1049 ntBASIC2.08□□□□□ -2.08
Cdx1P18111 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC2.08□□□□□ -2.08
Cdx1P18111 Gm15452-201ENSMUST00000119877 240 ntBASIC2.08□□□□□ -2.08
Cdx1P18111 Gm14989-201ENSMUST00000120497 207 ntBASIC2.08□□□□□ -2.08
Cdx1P18111 Gm13581-201ENSMUST00000120675 278 ntBASIC2.08□□□□□ -2.08
Cdx1P18111 Gm7327-201ENSMUST00000120925 652 ntBASIC2.08□□□□□ -2.08
Cdx1P18111 Gm13602-201ENSMUST00000122405 493 ntBASIC2.08□□□□□ -2.08
Cdx1P18111 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC2.08□□□□□ -2.08
Cdx1P18111 Gm24780-201ENSMUST00000157635 143 ntBASIC2.08□□□□□ -2.08
Cdx1P18111 Snord93-201ENSMUST00000175580 71 ntBASIC2.08□□□□□ -2.08
Cdx1P18111 Gm18692-201ENSMUST00000193047 511 ntBASIC2.08□□□□□ -2.08
Cdx1P18111 Gm37000-201ENSMUST00000193058 428 ntBASIC2.08□□□□□ -2.08
Cdx1P18111 Trbv7-201ENSMUST00000193339 402 ntBASIC2.08□□□□□ -2.08
Cdx1P18111 Gm33354-201ENSMUST00000195448 906 ntBASIC2.08□□□□□ -2.08
Cdx1P18111 Gm17893-201ENSMUST00000203017 770 ntBASIC2.08□□□□□ -2.08
Cdx1P18111 Gm43978-201ENSMUST00000203491 451 ntBASIC2.08□□□□□ -2.08
Cdx1P18111 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC2.08□□□□□ -2.08
Cdx1P18111 Gm44554-201ENSMUST00000208738 147 ntBASIC2.08□□□□□ -2.08
Cdx1P18111 Gm45636-201ENSMUST00000210497 1064 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms