Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm8995-201ENSMUST00000184842 7280 ntBASIC3.87□□□□□ -1.79
Hoxd3P09027 Gm7135-202ENSMUST00000191257 1905 ntBASIC3.87□□□□□ -1.79
Hoxd3P09027 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC3.87□□□□□ -1.79
Hoxd3P09027 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Hoxd3P09027 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Hoxd3P09027 Gm25419-201ENSMUST00000104215 191 ntBASIC3.87□□□□□ -1.79
Hoxd3P09027 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC3.87□□□□□ -1.79
Hoxd3P09027 Gm14560-201ENSMUST00000118672 375 ntBASIC3.87□□□□□ -1.79
Hoxd3P09027 Cox20-ps-201ENSMUST00000119872 353 ntBASIC3.87□□□□□ -1.79
Hoxd3P09027 n-R5s21-201ENSMUST00000122692 117 ntBASIC3.87□□□□□ -1.79
Hoxd3P09027 n-R5s216-201ENSMUST00000122755 112 ntBASIC3.87□□□□□ -1.79
Hoxd3P09027 Gm26045-201ENSMUST00000157862 97 ntBASIC3.87□□□□□ -1.79
Hoxd3P09027 Gm25861-201ENSMUST00000158251 109 ntBASIC3.87□□□□□ -1.79
Hoxd3P09027 Gm25019-201ENSMUST00000179732 110 ntBASIC3.87□□□□□ -1.79
Hoxd3P09027 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC3.87□□□□□ -1.79
Hoxd3P09027 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC3.87□□□□□ -1.79
Hoxd3P09027 Gm38238-201ENSMUST00000194334 346 ntBASIC3.87□□□□□ -1.79
Hoxd3P09027 Gm42990-201ENSMUST00000199231 312 ntBASIC3.87□□□□□ -1.79
Hoxd3P09027 Gm32308-201ENSMUST00000203053 280 ntBASIC3.87□□□□□ -1.79
Hoxd3P09027 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC3.87□□□□□ -1.79
Hoxd3P09027 Gm9377-201ENSMUST00000207227 623 ntBASIC3.87□□□□□ -1.79
Hoxd3P09027 Gm18015-201ENSMUST00000214879 316 ntBASIC3.87□□□□□ -1.79
Hoxd3P09027 Gm7117-201ENSMUST00000071515 387 ntBASIC3.87□□□□□ -1.79
Hoxd3P09027 Snora19-201ENSMUST00000082962 132 ntBASIC3.87□□□□□ -1.79
Hoxd3P09027 Gm23464-201ENSMUST00000083145 147 ntBASIC3.87□□□□□ -1.79
Hoxd3P09027 Gm23658-201ENSMUST00000083233 132 ntBASIC3.87□□□□□ -1.79
Hoxd3P09027 Gm10172-201ENSMUST00000085929 558 ntBASIC3.87□□□□□ -1.79
Hoxd3P09027 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Hoxd3P09027 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC3.87□□□□□ -1.79
Hoxd3P09027 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC3.87□□□□□ -1.79
Hoxd3P09027 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Hoxd3P09027 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Hoxd3P09027 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
Hoxd3P09027 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Hoxd3P09027 Gm42600-201ENSMUST00000202081 3588 ntBASIC3.87□□□□□ -1.79
Hoxd3P09027 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Hoxd3P09027 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
Hoxd3P09027 Gm29112-201ENSMUST00000188962 3487 ntBASIC3.86□□□□□ -1.79
Hoxd3P09027 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Hoxd3P09027 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Hoxd3P09027 Mir450b-201ENSMUST00000102095 82 ntBASIC3.86□□□□□ -1.79
Hoxd3P09027 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Hoxd3P09027 Mir294-201ENSMUST00000104710 84 ntBASIC3.86□□□□□ -1.79
Hoxd3P09027 Gm23879-201ENSMUST00000116874 126 ntBASIC3.86□□□□□ -1.79
Hoxd3P09027 Gm8145-201ENSMUST00000118220 745 ntBASIC3.86□□□□□ -1.79
Hoxd3P09027 Gm11366-201ENSMUST00000119279 429 ntBASIC3.86□□□□□ -1.79
Hoxd3P09027 Gm14619-201ENSMUST00000120480 168 ntBASIC3.86□□□□□ -1.79
Hoxd3P09027 n-R5s150-201ENSMUST00000122705 108 ntBASIC3.86□□□□□ -1.79
Hoxd3P09027 Gm24141-201ENSMUST00000122776 115 ntBASIC3.86□□□□□ -1.79
Hoxd3P09027 Gm24010-201ENSMUST00000157731 282 ntBASIC3.86□□□□□ -1.79
Hoxd3P09027 Gm17159-201ENSMUST00000169043 482 ntBASIC3.86□□□□□ -1.79
Hoxd3P09027 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Hoxd3P09027 Mir6416-201ENSMUST00000183664 117 ntBASIC3.86□□□□□ -1.79
Hoxd3P09027 Gm27818-201ENSMUST00000184536 159 ntBASIC3.86□□□□□ -1.79
Hoxd3P09027 Gm44349-201ENSMUST00000197048 123 ntBASIC3.86□□□□□ -1.79
Hoxd3P09027 Gm44519-201ENSMUST00000206486 122 ntBASIC3.86□□□□□ -1.79
Hoxd3P09027 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC3.86□□□□□ -1.79
Hoxd3P09027 CT030645.1-201ENSMUST00000224020 231 ntBASIC3.86□□□□□ -1.79
Hoxd3P09027 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Hoxd3P09027 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Hoxd3P09027 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
Hoxd3P09027 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Hoxd3P09027 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Hoxd3P09027 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Hoxd3P09027 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Hoxd3P09027 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
Hoxd3P09027 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
Hoxd3P09027 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Hoxd3P09027 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Hoxd3P09027 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC3.85□□□□□ -1.79
Hoxd3P09027 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC3.85□□□□□ -1.79
Hoxd3P09027 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Hoxd3P09027 Gm43188-201ENSMUST00000200180 2160 ntBASIC3.85□□□□□ -1.79
Hoxd3P09027 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC3.85□□□□□ -1.79
Hoxd3P09027 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC3.85□□□□□ -1.79
Hoxd3P09027 Gm11448-201ENSMUST00000120427 450 ntBASIC3.85□□□□□ -1.79
Hoxd3P09027 Gm13149-201ENSMUST00000122071 339 ntBASIC3.85□□□□□ -1.79
Hoxd3P09027 Gm22845-201ENSMUST00000157712 104 ntBASIC3.85□□□□□ -1.79
Hoxd3P09027 Gm24926-201ENSMUST00000178053 79 ntBASIC3.85□□□□□ -1.79
Hoxd3P09027 Gm22632-201ENSMUST00000178266 79 ntBASIC3.85□□□□□ -1.79
Hoxd3P09027 Gm27820-201ENSMUST00000183628 175 ntBASIC3.85□□□□□ -1.79
Hoxd3P09027 Mir7222-201ENSMUST00000183740 75 ntBASIC3.85□□□□□ -1.79
Hoxd3P09027 Gm28685-201ENSMUST00000187545 1101 ntBASIC3.85□□□□□ -1.79
Hoxd3P09027 Gm38332-201ENSMUST00000194189 147 ntBASIC3.85□□□□□ -1.79
Hoxd3P09027 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC3.85□□□□□ -1.79
Hoxd3P09027 Gm20056-201ENSMUST00000194813 519 ntBASIC3.85□□□□□ -1.79
Hoxd3P09027 Gm38088-201ENSMUST00000195829 241 ntBASIC3.85□□□□□ -1.79
Hoxd3P09027 Gm43524-201ENSMUST00000197278 298 ntBASIC3.85□□□□□ -1.79
Hoxd3P09027 Gm45543-201ENSMUST00000209327 88 ntBASIC3.85□□□□□ -1.79
Hoxd3P09027 Gm45492-201ENSMUST00000211611 288 ntBASIC3.85□□□□□ -1.79
Hoxd3P09027 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Hoxd3P09027 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC3.85□□□□□ -1.79
Hoxd3P09027 AC160134.1-201ENSMUST00000213450 551 ntBASIC3.85□□□□□ -1.79
Hoxd3P09027 AC132615.1-201ENSMUST00000213873 255 ntBASIC3.85□□□□□ -1.79
Hoxd3P09027 AC069074.2-201ENSMUST00000217819 428 ntBASIC3.85□□□□□ -1.79
Hoxd3P09027 AC125543.1-201ENSMUST00000222778 101 ntBASIC3.85□□□□□ -1.79
Hoxd3P09027 AC161269.1-201ENSMUST00000228426 318 ntBASIC3.85□□□□□ -1.79
Hoxd3P09027 Gm5215-201ENSMUST00000054380 405 ntBASIC3.85□□□□□ -1.79
Hoxd3P09027 Gm25634-201ENSMUST00000082667 105 ntBASIC3.85□□□□□ -1.79
Hoxd3P09027 Gm23947-201ENSMUST00000093636 107 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 97.8 ms