Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC2.2□□□□□ -2.06
ApoeP08226 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC2.2□□□□□ -2.06
ApoeP08226 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
ApoeP08226 Mir6408-201ENSMUST00000183643 91 ntBASIC2.2□□□□□ -2.06
ApoeP08226 Gm29516-201ENSMUST00000190402 468 ntBASIC2.2□□□□□ -2.06
ApoeP08226 Gm43193-201ENSMUST00000197732 441 ntBASIC2.2□□□□□ -2.06
ApoeP08226 Gm43217-201ENSMUST00000199513 367 ntBASIC2.2□□□□□ -2.06
ApoeP08226 Gm43955-201ENSMUST00000204332 142 ntBASIC2.2□□□□□ -2.06
ApoeP08226 Gm10297-201ENSMUST00000207136 651 ntBASIC2.2□□□□□ -2.06
ApoeP08226 AC115047.1-201ENSMUST00000213795 322 ntBASIC2.2□□□□□ -2.06
ApoeP08226 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
ApoeP08226 Gnrh1-202ENSMUST00000223929 428 ntBASIC2.2□□□□□ -2.06
ApoeP08226 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
ApoeP08226 AC162910.1-201ENSMUST00000221219 1723 ntBASIC2.2□□□□□ -2.06
ApoeP08226 Gm12636-201ENSMUST00000117395 624 ntBASIC2.19□□□□□ -2.06
ApoeP08226 Gm12443-201ENSMUST00000122308 323 ntBASIC2.19□□□□□ -2.06
ApoeP08226 Gm23118-201ENSMUST00000122657 187 ntBASIC2.19□□□□□ -2.06
ApoeP08226 Gm25339-201ENSMUST00000157458 232 ntBASIC2.19□□□□□ -2.06
ApoeP08226 Gm25910-201ENSMUST00000157620 140 ntBASIC2.19□□□□□ -2.06
ApoeP08226 Gm22554-201ENSMUST00000157798 147 ntBASIC2.19□□□□□ -2.06
ApoeP08226 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC2.19□□□□□ -2.06
ApoeP08226 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.19□□□□□ -2.06
ApoeP08226 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC2.19□□□□□ -2.06
ApoeP08226 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC2.19□□□□□ -2.06
ApoeP08226 Gm22584-201ENSMUST00000177935 92 ntBASIC2.19□□□□□ -2.06
ApoeP08226 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
ApoeP08226 Gm37557-201ENSMUST00000191640 139 ntBASIC2.19□□□□□ -2.06
ApoeP08226 Gm36966-201ENSMUST00000192217 413 ntBASIC2.19□□□□□ -2.06
ApoeP08226 Igkv8-31-201ENSMUST00000200040 372 ntBASIC2.19□□□□□ -2.06
ApoeP08226 Gm44526-201ENSMUST00000204664 121 ntBASIC2.19□□□□□ -2.06
ApoeP08226 Gm44919-201ENSMUST00000208587 1073 ntBASIC2.19□□□□□ -2.06
ApoeP08226 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC2.19□□□□□ -2.06
ApoeP08226 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
ApoeP08226 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.19□□□□□ -2.06
ApoeP08226 AC169038.1-201ENSMUST00000227378 1352 ntBASIC2.19□□□□□ -2.06
ApoeP08226 Mir682-201ENSMUST00000102281 96 ntBASIC2.18□□□□□ -2.06
ApoeP08226 Gm22115-201ENSMUST00000103976 133 ntBASIC2.18□□□□□ -2.06
ApoeP08226 Gm23923-201ENSMUST00000104108 133 ntBASIC2.18□□□□□ -2.06
ApoeP08226 Gm12106-201ENSMUST00000116006 1200 ntBASIC2.18□□□□□ -2.06
ApoeP08226 Gm14894-201ENSMUST00000117170 270 ntBASIC2.18□□□□□ -2.06
ApoeP08226 Gm15312-201ENSMUST00000118827 271 ntBASIC2.18□□□□□ -2.06
ApoeP08226 Gm11785-201ENSMUST00000120165 601 ntBASIC2.18□□□□□ -2.06
ApoeP08226 Gm15309-201ENSMUST00000121644 240 ntBASIC2.18□□□□□ -2.06
ApoeP08226 Gm25292-201ENSMUST00000122797 322 ntBASIC2.18□□□□□ -2.06
ApoeP08226 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC2.18□□□□□ -2.06
ApoeP08226 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC2.18□□□□□ -2.06
ApoeP08226 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC2.18□□□□□ -2.06
ApoeP08226 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC2.18□□□□□ -2.06
ApoeP08226 Gm26186-201ENSMUST00000157689 125 ntBASIC2.18□□□□□ -2.06
ApoeP08226 Gm24769-201ENSMUST00000158506 129 ntBASIC2.18□□□□□ -2.06
ApoeP08226 Gm16326-201ENSMUST00000162843 414 ntBASIC2.18□□□□□ -2.06
ApoeP08226 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC2.18□□□□□ -2.06
ApoeP08226 Gm24897-201ENSMUST00000179033 107 ntBASIC2.18□□□□□ -2.06
ApoeP08226 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC2.18□□□□□ -2.06
ApoeP08226 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC2.18□□□□□ -2.06
ApoeP08226 Gm37449-201ENSMUST00000193016 270 ntBASIC2.18□□□□□ -2.06
ApoeP08226 Gm18658-201ENSMUST00000195558 270 ntBASIC2.18□□□□□ -2.06
ApoeP08226 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC2.18□□□□□ -2.06
ApoeP08226 Gm44961-201ENSMUST00000207450 196 ntBASIC2.18□□□□□ -2.06
ApoeP08226 Gm45101-201ENSMUST00000208327 232 ntBASIC2.18□□□□□ -2.06
ApoeP08226 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC2.18□□□□□ -2.06
ApoeP08226 Gm19326-201ENSMUST00000219818 326 ntBASIC2.18□□□□□ -2.06
ApoeP08226 Gm22247-201ENSMUST00000082476 131 ntBASIC2.18□□□□□ -2.06
ApoeP08226 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.18□□□□□ -2.06
ApoeP08226 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
ApoeP08226 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.18□□□□□ -2.06
ApoeP08226 Gm25563-201ENSMUST00000104603 74 ntBASIC2.17□□□□□ -2.06
ApoeP08226 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
ApoeP08226 Gm15846-201ENSMUST00000116022 320 ntBASIC2.17□□□□□ -2.06
ApoeP08226 Mir466k-201ENSMUST00000116774 122 ntBASIC2.17□□□□□ -2.06
ApoeP08226 Gm13756-201ENSMUST00000117618 222 ntBASIC2.17□□□□□ -2.06
ApoeP08226 Gm14428-201ENSMUST00000120408 822 ntBASIC2.17□□□□□ -2.06
ApoeP08226 Gm14713-201ENSMUST00000122362 686 ntBASIC2.17□□□□□ -2.06
ApoeP08226 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.17□□□□□ -2.06
ApoeP08226 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC2.17□□□□□ -2.06
ApoeP08226 Gm25365-201ENSMUST00000158852 121 ntBASIC2.17□□□□□ -2.06
ApoeP08226 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.17□□□□□ -2.06
ApoeP08226 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC2.17□□□□□ -2.06
ApoeP08226 Gm28283-201ENSMUST00000185509 178 ntBASIC2.17□□□□□ -2.06
ApoeP08226 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.17□□□□□ -2.06
ApoeP08226 Gm37029-201ENSMUST00000195773 239 ntBASIC2.17□□□□□ -2.06
ApoeP08226 Gm42805-201ENSMUST00000196158 276 ntBASIC2.17□□□□□ -2.06
ApoeP08226 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC2.17□□□□□ -2.06
ApoeP08226 Igkv1-108-201ENSMUST00000198926 298 ntBASIC2.17□□□□□ -2.06
ApoeP08226 Gm44050-201ENSMUST00000204263 527 ntBASIC2.17□□□□□ -2.06
ApoeP08226 AL929265.1-201ENSMUST00000213427 125 ntBASIC2.17□□□□□ -2.06
ApoeP08226 AC158803.1-201ENSMUST00000219495 316 ntBASIC2.17□□□□□ -2.06
ApoeP08226 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC2.17□□□□□ -2.06
ApoeP08226 AC183096.1-201ENSMUST00000226392 130 ntBASIC2.17□□□□□ -2.06
ApoeP08226 Gm24044-201ENSMUST00000083107 156 ntBASIC2.17□□□□□ -2.06
ApoeP08226 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
ApoeP08226 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC2.17□□□□□ -2.06
ApoeP08226 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
ApoeP08226 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
ApoeP08226 Gm4732-201ENSMUST00000118778 473 ntBASIC2.16□□□□□ -2.06
ApoeP08226 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC2.16□□□□□ -2.06
ApoeP08226 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC2.16□□□□□ -2.06
ApoeP08226 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC2.16□□□□□ -2.06
ApoeP08226 Gm17377-201ENSMUST00000165184 207 ntBASIC2.16□□□□□ -2.06
ApoeP08226 Gm23933-201ENSMUST00000178405 79 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms