Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Col5a1O88207 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
Col5a1O88207 Mir467h-201ENSMUST00000116759 121 ntBASIC1.86□□□□□ -2.11
Col5a1O88207 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Col5a1O88207 Gm14677-201ENSMUST00000117866 486 ntBASIC1.86□□□□□ -2.11
Col5a1O88207 Gm12102-201ENSMUST00000118251 604 ntBASIC1.86□□□□□ -2.11
Col5a1O88207 Gm12006-201ENSMUST00000120786 403 ntBASIC1.86□□□□□ -2.11
Col5a1O88207 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC1.86□□□□□ -2.11
Col5a1O88207 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Col5a1O88207 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
Col5a1O88207 Mir5098-201ENSMUST00000175320 82 ntBASIC1.86□□□□□ -2.11
Col5a1O88207 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC1.86□□□□□ -2.11
Col5a1O88207 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Col5a1O88207 Gm6113-201ENSMUST00000180319 639 ntBASIC1.86□□□□□ -2.11
Col5a1O88207 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Col5a1O88207 Gm29604-201ENSMUST00000187176 163 ntBASIC1.86□□□□□ -2.11
Col5a1O88207 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC1.86□□□□□ -2.11
Col5a1O88207 Gm44050-201ENSMUST00000204263 527 ntBASIC1.86□□□□□ -2.11
Col5a1O88207 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC1.86□□□□□ -2.11
Col5a1O88207 AC126275.1-201ENSMUST00000224881 446 ntBASIC1.86□□□□□ -2.11
Col5a1O88207 AC183096.2-201ENSMUST00000228733 457 ntBASIC1.86□□□□□ -2.11
Col5a1O88207 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Col5a1O88207 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Col5a1O88207 Gm23447-201ENSMUST00000082798 163 ntBASIC1.86□□□□□ -2.11
Col5a1O88207 Gm24707-201ENSMUST00000082812 107 ntBASIC1.86□□□□□ -2.11
Col5a1O88207 Gm24254-201ENSMUST00000083702 104 ntBASIC1.86□□□□□ -2.11
Col5a1O88207 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Col5a1O88207 Gm7133-201ENSMUST00000187797 2039 ntBASIC1.86□□□□□ -2.11
Col5a1O88207 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Col5a1O88207 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Col5a1O88207 Mir669o-201ENSMUST00000103898 96 ntBASIC1.85□□□□□ -2.11
Col5a1O88207 Gm25090-201ENSMUST00000104000 132 ntBASIC1.85□□□□□ -2.11
Col5a1O88207 Gm6429-201ENSMUST00000117144 475 ntBASIC1.85□□□□□ -2.11
Col5a1O88207 Gm12044-201ENSMUST00000120335 213 ntBASIC1.85□□□□□ -2.11
Col5a1O88207 n-R5s191-201ENSMUST00000122724 116 ntBASIC1.85□□□□□ -2.11
Col5a1O88207 Gm22026-201ENSMUST00000122735 281 ntBASIC1.85□□□□□ -2.11
Col5a1O88207 Gm16328-201ENSMUST00000126985 196 ntBASIC1.85□□□□□ -2.11
Col5a1O88207 Gm22727-201ENSMUST00000158090 116 ntBASIC1.85□□□□□ -2.11
Col5a1O88207 Gm23059-201ENSMUST00000158978 107 ntBASIC1.85□□□□□ -2.11
Col5a1O88207 Gm22853-201ENSMUST00000174974 131 ntBASIC1.85□□□□□ -2.11
Col5a1O88207 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC1.85□□□□□ -2.11
Col5a1O88207 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC1.85□□□□□ -2.11
Col5a1O88207 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC1.85□□□□□ -2.11
Col5a1O88207 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC1.85□□□□□ -2.11
Col5a1O88207 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC1.85□□□□□ -2.11
Col5a1O88207 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC1.85□□□□□ -2.11
Col5a1O88207 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC1.85□□□□□ -2.11
Col5a1O88207 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC1.85□□□□□ -2.11
Col5a1O88207 Gm25412-201ENSMUST00000180258 107 ntBASIC1.85□□□□□ -2.11
Col5a1O88207 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC1.85□□□□□ -2.11
Col5a1O88207 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC1.85□□□□□ -2.11
Col5a1O88207 Gm27861-201ENSMUST00000183920 214 ntBASIC1.85□□□□□ -2.11
Col5a1O88207 Gm19193-201ENSMUST00000190263 590 ntBASIC1.85□□□□□ -2.11
Col5a1O88207 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC1.85□□□□□ -2.11
Col5a1O88207 Gm7726-201ENSMUST00000206241 231 ntBASIC1.85□□□□□ -2.11
Col5a1O88207 Gm9375-201ENSMUST00000208899 903 ntBASIC1.85□□□□□ -2.11
Col5a1O88207 Gm6012-201ENSMUST00000210821 730 ntBASIC1.85□□□□□ -2.11
Col5a1O88207 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC1.85□□□□□ -2.11
Col5a1O88207 AC141642.1-201ENSMUST00000220598 229 ntBASIC1.85□□□□□ -2.11
Col5a1O88207 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Col5a1O88207 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Col5a1O88207 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Col5a1O88207 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Col5a1O88207 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Col5a1O88207 Gm19074-201ENSMUST00000218915 1429 ntBASIC1.85□□□□□ -2.11
Col5a1O88207 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Col5a1O88207 Gm14445-201ENSMUST00000117051 1484 ntBASIC1.85□□□□□ -2.11
Col5a1O88207 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Col5a1O88207 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
Col5a1O88207 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Col5a1O88207 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC1.84□□□□□ -2.11
Col5a1O88207 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC1.84□□□□□ -2.11
Col5a1O88207 Gm22076-201ENSMUST00000158601 84 ntBASIC1.84□□□□□ -2.11
Col5a1O88207 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC1.84□□□□□ -2.11
Col5a1O88207 Gm24925-201ENSMUST00000178157 107 ntBASIC1.84□□□□□ -2.11
Col5a1O88207 Gm27428-201ENSMUST00000184289 110 ntBASIC1.84□□□□□ -2.11
Col5a1O88207 Gm28794-201ENSMUST00000185276 136 ntBASIC1.84□□□□□ -2.11
Col5a1O88207 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC1.84□□□□□ -2.11
Col5a1O88207 AL772265.1-201ENSMUST00000214379 305 ntBASIC1.84□□□□□ -2.11
Col5a1O88207 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Col5a1O88207 AC122465.2-201ENSMUST00000221774 354 ntBASIC1.84□□□□□ -2.11
Col5a1O88207 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC1.84□□□□□ -2.11
Col5a1O88207 CT010480.1-201ENSMUST00000223612 363 ntBASIC1.84□□□□□ -2.11
Col5a1O88207 AC116656.1-201ENSMUST00000227040 755 ntBASIC1.84□□□□□ -2.11
Col5a1O88207 Gm24928-201ENSMUST00000083399 107 ntBASIC1.84□□□□□ -2.11
Col5a1O88207 Gm25897-201ENSMUST00000083709 107 ntBASIC1.84□□□□□ -2.11
Col5a1O88207 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Col5a1O88207 Gm38278-201ENSMUST00000194715 1365 ntBASIC1.84□□□□□ -2.11
Col5a1O88207 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC1.84□□□□□ -2.12
Col5a1O88207 Mir878-201ENSMUST00000104680 78 ntBASIC1.84□□□□□ -2.12
Col5a1O88207 Gm11843-201ENSMUST00000118984 425 ntBASIC1.84□□□□□ -2.12
Col5a1O88207 Defa-ps8-201ENSMUST00000120972 279 ntBASIC1.84□□□□□ -2.12
Col5a1O88207 Gm23470-201ENSMUST00000157129 120 ntBASIC1.84□□□□□ -2.12
Col5a1O88207 Mir1927-201ENSMUST00000158579 109 ntBASIC1.84□□□□□ -2.12
Col5a1O88207 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC1.84□□□□□ -2.12
Col5a1O88207 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.84□□□□□ -2.12
Col5a1O88207 Gm28560-201ENSMUST00000186091 315 ntBASIC1.84□□□□□ -2.12
Col5a1O88207 Gm28334-201ENSMUST00000186653 315 ntBASIC1.84□□□□□ -2.12
Col5a1O88207 Gm28495-201ENSMUST00000188452 315 ntBASIC1.84□□□□□ -2.12
Col5a1O88207 Gm28232-201ENSMUST00000188683 315 ntBASIC1.84□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 92.5 ms