Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Mir291a-201ENSMUST00000104815 82 ntBASIC2.74□□□□□ -1.97
Trav13d-3J3QMG8 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Trav13d-3J3QMG8 Gm9043-201ENSMUST00000119677 314 ntBASIC2.74□□□□□ -1.97
Trav13d-3J3QMG8 Gm12693-201ENSMUST00000121965 483 ntBASIC2.74□□□□□ -1.97
Trav13d-3J3QMG8 Gm14629-201ENSMUST00000122428 144 ntBASIC2.74□□□□□ -1.97
Trav13d-3J3QMG8 Gm15899-201ENSMUST00000128586 238 ntBASIC2.74□□□□□ -1.97
Trav13d-3J3QMG8 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC2.74□□□□□ -1.97
Trav13d-3J3QMG8 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC2.74□□□□□ -1.97
Trav13d-3J3QMG8 Gm22560-201ENSMUST00000157332 120 ntBASIC2.74□□□□□ -1.97
Trav13d-3J3QMG8 Gm25220-201ENSMUST00000157546 95 ntBASIC2.74□□□□□ -1.97
Trav13d-3J3QMG8 Gm26414-201ENSMUST00000157674 269 ntBASIC2.74□□□□□ -1.97
Trav13d-3J3QMG8 Gm20542-201ENSMUST00000174582 372 ntBASIC2.74□□□□□ -1.97
Trav13d-3J3QMG8 Gm22367-201ENSMUST00000178930 132 ntBASIC2.74□□□□□ -1.97
Trav13d-3J3QMG8 Gm29602-201ENSMUST00000186887 442 ntBASIC2.74□□□□□ -1.97
Trav13d-3J3QMG8 Gm28506-201ENSMUST00000189937 150 ntBASIC2.74□□□□□ -1.97
Trav13d-3J3QMG8 Gm37085-201ENSMUST00000193780 196 ntBASIC2.74□□□□□ -1.97
Trav13d-3J3QMG8 Gm9227-201ENSMUST00000194733 566 ntBASIC2.74□□□□□ -1.97
Trav13d-3J3QMG8 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Trav13d-3J3QMG8 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Trav13d-3J3QMG8 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC2.74□□□□□ -1.97
Trav13d-3J3QMG8 Gm5001-201ENSMUST00000204361 331 ntBASIC2.74□□□□□ -1.97
Trav13d-3J3QMG8 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC2.74□□□□□ -1.97
Trav13d-3J3QMG8 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC2.74□□□□□ -1.97
Trav13d-3J3QMG8 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC2.74□□□□□ -1.97
Trav13d-3J3QMG8 Gm30674-201ENSMUST00000214523 392 ntBASIC2.74□□□□□ -1.97
Trav13d-3J3QMG8 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC2.74□□□□□ -1.97
Trav13d-3J3QMG8 AC115289.1-201ENSMUST00000224915 522 ntBASIC2.74□□□□□ -1.97
Trav13d-3J3QMG8 AC127371.1-202ENSMUST00000228923 306 ntBASIC2.74□□□□□ -1.97
Trav13d-3J3QMG8 Gm9765-201ENSMUST00000043170 321 ntBASIC2.74□□□□□ -1.97
Trav13d-3J3QMG8 Ear14-201ENSMUST00000049559 468 ntBASIC2.74□□□□□ -1.97
Trav13d-3J3QMG8 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
Trav13d-3J3QMG8 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Trav13d-3J3QMG8 n-R5s166-201ENSMUST00000082898 121 ntBASIC2.74□□□□□ -1.97
Trav13d-3J3QMG8 Mir208a-201ENSMUST00000083498 83 ntBASIC2.74□□□□□ -1.97
Trav13d-3J3QMG8 Olfr895-201ENSMUST00000093864 951 ntBASIC2.74□□□□□ -1.97
Trav13d-3J3QMG8 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Trav13d-3J3QMG8 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
Trav13d-3J3QMG8 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Trav13d-3J3QMG8 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Trav13d-3J3QMG8 Gm45540-201ENSMUST00000209271 3606 ntBASIC2.74□□□□□ -1.97
Trav13d-3J3QMG8 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC2.74□□□□□ -1.97
Trav13d-3J3QMG8 Gm14415-201ENSMUST00000118260 1578 ntBASIC2.74□□□□□ -1.97
Trav13d-3J3QMG8 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Trav13d-3J3QMG8 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Trav13d-3J3QMG8 Gm14987-201ENSMUST00000117820 676 ntBASIC2.73□□□□□ -1.97
Trav13d-3J3QMG8 Gm14119-201ENSMUST00000119511 235 ntBASIC2.73□□□□□ -1.97
Trav13d-3J3QMG8 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Trav13d-3J3QMG8 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC2.73□□□□□ -1.97
Trav13d-3J3QMG8 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC2.73□□□□□ -1.97
Trav13d-3J3QMG8 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC2.73□□□□□ -1.97
Trav13d-3J3QMG8 Gm24314-201ENSMUST00000158274 123 ntBASIC2.73□□□□□ -1.97
Trav13d-3J3QMG8 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC2.73□□□□□ -1.97
Trav13d-3J3QMG8 Gm21754-201ENSMUST00000177550 479 ntBASIC2.73□□□□□ -1.97
Trav13d-3J3QMG8 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Trav13d-3J3QMG8 Gm20794-201ENSMUST00000177626 628 ntBASIC2.73□□□□□ -1.97
Trav13d-3J3QMG8 Gm21744-201ENSMUST00000178403 662 ntBASIC2.73□□□□□ -1.97
Trav13d-3J3QMG8 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Trav13d-3J3QMG8 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Trav13d-3J3QMG8 Gm21171-201ENSMUST00000180048 673 ntBASIC2.73□□□□□ -1.97
Trav13d-3J3QMG8 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
Trav13d-3J3QMG8 Gm9022-202ENSMUST00000183285 483 ntBASIC2.73□□□□□ -1.97
Trav13d-3J3QMG8 Gm29574-201ENSMUST00000186226 696 ntBASIC2.73□□□□□ -1.97
Trav13d-3J3QMG8 Gm28828-201ENSMUST00000186601 696 ntBASIC2.73□□□□□ -1.97
Trav13d-3J3QMG8 Gm28700-201ENSMUST00000187614 579 ntBASIC2.73□□□□□ -1.97
Trav13d-3J3QMG8 Gm28860-201ENSMUST00000188103 313 ntBASIC2.73□□□□□ -1.97
Trav13d-3J3QMG8 Gm28843-201ENSMUST00000189198 678 ntBASIC2.73□□□□□ -1.97
Trav13d-3J3QMG8 Gm29184-201ENSMUST00000190038 334 ntBASIC2.73□□□□□ -1.97
Trav13d-3J3QMG8 Gm28159-201ENSMUST00000190296 696 ntBASIC2.73□□□□□ -1.97
Trav13d-3J3QMG8 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC2.73□□□□□ -1.97
Trav13d-3J3QMG8 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Trav13d-3J3QMG8 Gm28211-201ENSMUST00000190920 315 ntBASIC2.73□□□□□ -1.97
Trav13d-3J3QMG8 Gm29546-201ENSMUST00000191171 678 ntBASIC2.73□□□□□ -1.97
Trav13d-3J3QMG8 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC2.73□□□□□ -1.97
Trav13d-3J3QMG8 Gm43367-201ENSMUST00000199986 625 ntBASIC2.73□□□□□ -1.97
Trav13d-3J3QMG8 Igkv1-136-201ENSMUST00000200635 297 ntBASIC2.73□□□□□ -1.97
Trav13d-3J3QMG8 Gm7039-201ENSMUST00000205138 346 ntBASIC2.73□□□□□ -1.97
Trav13d-3J3QMG8 Gm45395-201ENSMUST00000209891 559 ntBASIC2.73□□□□□ -1.97
Trav13d-3J3QMG8 AC153361.1-201ENSMUST00000219679 247 ntBASIC2.73□□□□□ -1.97
Trav13d-3J3QMG8 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC2.73□□□□□ -1.97
Trav13d-3J3QMG8 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Trav13d-3J3QMG8 AC134577.1-201ENSMUST00000227572 295 ntBASIC2.73□□□□□ -1.97
Trav13d-3J3QMG8 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC2.73□□□□□ -1.97
Trav13d-3J3QMG8 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC2.73□□□□□ -1.97
Trav13d-3J3QMG8 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Trav13d-3J3QMG8 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
Trav13d-3J3QMG8 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Trav13d-3J3QMG8 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Trav13d-3J3QMG8 Gm44715-201ENSMUST00000209049 3839 ntBASIC2.72□□□□□ -1.97
Trav13d-3J3QMG8 Gm37598-201ENSMUST00000194506 1301 ntBASIC2.72□□□□□ -1.97
Trav13d-3J3QMG8 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC2.72□□□□□ -1.97
Trav13d-3J3QMG8 Gm7853-201ENSMUST00000100708 478 ntBASIC2.72□□□□□ -1.97
Trav13d-3J3QMG8 Mir687-201ENSMUST00000102166 89 ntBASIC2.72□□□□□ -1.97
Trav13d-3J3QMG8 Mir673-201ENSMUST00000102361 91 ntBASIC2.72□□□□□ -1.97
Trav13d-3J3QMG8 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Trav13d-3J3QMG8 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC2.72□□□□□ -1.97
Trav13d-3J3QMG8 Gm5287-201ENSMUST00000120666 598 ntBASIC2.72□□□□□ -1.97
Trav13d-3J3QMG8 Gm14841-201ENSMUST00000121067 758 ntBASIC2.72□□□□□ -1.97
Trav13d-3J3QMG8 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC2.72□□□□□ -1.97
Trav13d-3J3QMG8 Gm22956-201ENSMUST00000122520 80 ntBASIC2.72□□□□□ -1.97
Trav13d-3J3QMG8 Gm23791-201ENSMUST00000122553 293 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms