Protein–RNA interactions for Protein: D3YXG0

Hmcn1, Hemicentin-1, mousemouse

Predictions only

Length 5,634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmcn1D3YXG0 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
Hmcn1D3YXG0 Sorbs2-201ENSMUST00000067065 6337 ntTSL 5 BASIC1.3□□□□□ -2.2
Hmcn1D3YXG0 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
Hmcn1D3YXG0 AC159326.1-201ENSMUST00000219989 1302 ntBASIC1.3□□□□□ -2.2
Hmcn1D3YXG0 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
Hmcn1D3YXG0 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC1.3□□□□□ -2.2
Hmcn1D3YXG0 Dock5-201ENSMUST00000039135 9988 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
Hmcn1D3YXG0 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC1.3□□□□□ -2.2
Hmcn1D3YXG0 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.3□□□□□ -2.2
Hmcn1D3YXG0 Gm11692-201ENSMUST00000122121 902 ntBASIC1.3□□□□□ -2.2
Hmcn1D3YXG0 Gm25768-201ENSMUST00000158570 98 ntBASIC1.3□□□□□ -2.2
Hmcn1D3YXG0 AC154297.1-201ENSMUST00000171334 397 ntBASIC1.3□□□□□ -2.2
Hmcn1D3YXG0 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC1.3□□□□□ -2.2
Hmcn1D3YXG0 Gm27522-201ENSMUST00000183949 230 ntBASIC1.3□□□□□ -2.2
Hmcn1D3YXG0 Gm28282-201ENSMUST00000186072 186 ntBASIC1.3□□□□□ -2.2
Hmcn1D3YXG0 Gm28924-201ENSMUST00000190012 241 ntBASIC1.3□□□□□ -2.2
Hmcn1D3YXG0 Gm43114-201ENSMUST00000198298 343 ntBASIC1.3□□□□□ -2.2
Hmcn1D3YXG0 AC192091.2-201ENSMUST00000217869 117 ntBASIC1.3□□□□□ -2.2
Hmcn1D3YXG0 AC107453.2-201ENSMUST00000227714 655 ntBASIC1.3□□□□□ -2.2
Hmcn1D3YXG0 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC1.3□□□□□ -2.2
Hmcn1D3YXG0 Sox6-202ENSMUST00000106612 8193 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
Hmcn1D3YXG0 Amot-201ENSMUST00000112835 6519 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
Hmcn1D3YXG0 AC131687.1-201ENSMUST00000225931 5446 ntBASIC1.3□□□□□ -2.2
Hmcn1D3YXG0 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Gm23133-201ENSMUST00000104255 135 ntBASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Gm16186-201ENSMUST00000120132 216 ntBASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Gm13506-201ENSMUST00000120391 1083 ntBASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Gm13009-201ENSMUST00000121307 267 ntBASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Gm11403-201ENSMUST00000122195 369 ntBASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Gm23048-201ENSMUST00000157237 129 ntBASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Gm25465-201ENSMUST00000157716 105 ntBASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Gm17149-201ENSMUST00000164712 375 ntBASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Gm9613-201ENSMUST00000171662 196 ntBASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Gm23726-201ENSMUST00000178937 67 ntBASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Gm23306-201ENSMUST00000179058 105 ntBASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Gm27975-201ENSMUST00000184400 101 ntBASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Gm37050-201ENSMUST00000193464 466 ntBASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Gm42832-201ENSMUST00000196361 745 ntBASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Mir703-201ENSMUST00000197105 109 ntBASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Gm8069-201ENSMUST00000197887 154 ntBASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Gm43217-201ENSMUST00000199513 367 ntBASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 AC160031.2-201ENSMUST00000218242 274 ntBASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 AC155922.1-201ENSMUST00000220100 373 ntBASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 AC211878.5-201ENSMUST00000221697 409 ntBASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Gm24927-201ENSMUST00000083397 107 ntBASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Mir200b-201ENSMUST00000083615 70 ntBASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Mroh2a-201ENSMUST00000061013 7526 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Srcap-207ENSMUST00000187040 10654 ntAPPRIS P2 TSL 5 BASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Gm4732-201ENSMUST00000118778 473 ntBASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Gm25444-201ENSMUST00000158999 113 ntBASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Gm42593-201ENSMUST00000198469 377 ntBASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Gm6649-201ENSMUST00000199743 1165 ntBASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Gm43415-201ENSMUST00000201934 750 ntBASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Gm44389-201ENSMUST00000203795 182 ntBASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 AC153954.2-201ENSMUST00000213811 287 ntBASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 AC172027.1-201ENSMUST00000217659 337 ntBASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 AC167202.1-201ENSMUST00000219027 331 ntBASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 AC147633.1-201ENSMUST00000225134 259 ntBASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 AC133203.2-201ENSMUST00000226709 464 ntBASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Gm27450-201ENSMUST00000104632 90 ntBASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Gm5384-201ENSMUST00000120313 463 ntBASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Gm13560-201ENSMUST00000121865 329 ntBASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Gm25783-201ENSMUST00000122525 190 ntBASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Gm23441-201ENSMUST00000157268 127 ntBASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Gm24774-201ENSMUST00000157384 134 ntBASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Gm22804-201ENSMUST00000158052 101 ntBASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Gm26466-201ENSMUST00000179615 79 ntBASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Gm27599-201ENSMUST00000183758 174 ntBASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Gm27660-201ENSMUST00000184028 208 ntBASIC1.29□□□□□ -2.2
Hmcn1D3YXG0 Gm1833-201ENSMUST00000191608 682 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms