Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC0.76□□□□□ -2.29
Trav4-3A0A0B4J1K1 AC133934.2-201ENSMUST00000221729 4129 ntBASIC0.75□□□□□ -2.29
Trav4-3A0A0B4J1K1 AL645643.1-201ENSMUST00000222438 3897 ntBASIC0.75□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm15421-202ENSMUST00000118224 399 ntBASIC0.75□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm2003-201ENSMUST00000118537 636 ntBASIC0.75□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm12646-201ENSMUST00000119144 238 ntBASIC0.75□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm6461-201ENSMUST00000120015 633 ntBASIC0.75□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm13433-201ENSMUST00000121701 240 ntBASIC0.75□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm11965-201ENSMUST00000122017 277 ntBASIC0.75□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm25624-201ENSMUST00000157222 275 ntBASIC0.75□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm26049-201ENSMUST00000157313 108 ntBASIC0.75□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm24959-201ENSMUST00000157924 146 ntBASIC0.75□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm22074-201ENSMUST00000158595 113 ntBASIC0.75□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm24677-201ENSMUST00000158755 150 ntBASIC0.75□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm23339-201ENSMUST00000158962 139 ntBASIC0.75□□□□□ -2.29
Trav4-3A0A0B4J1K1 Mir6374-201ENSMUST00000184003 107 ntBASIC0.75□□□□□ -2.29
Trav4-3A0A0B4J1K1 Mir6380-201ENSMUST00000184334 81 ntBASIC0.75□□□□□ -2.29
Trav4-3A0A0B4J1K1 Mir6975-201ENSMUST00000184879 61 ntBASIC0.75□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm38238-201ENSMUST00000194334 346 ntBASIC0.75□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm43199-201ENSMUST00000200019 307 ntBASIC0.75□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm45207-201ENSMUST00000207469 145 ntBASIC0.75□□□□□ -2.29
Trav4-3A0A0B4J1K1 AC138290.2-201ENSMUST00000218822 369 ntBASIC0.75□□□□□ -2.29
Trav4-3A0A0B4J1K1 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC0.75□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm26493-201ENSMUST00000083155 136 ntBASIC0.75□□□□□ -2.29
Trav4-3A0A0B4J1K1 Mir211-201ENSMUST00000083651 106 ntBASIC0.75□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm25683-201ENSMUST00000083940 131 ntBASIC0.75□□□□□ -2.29
Trav4-3A0A0B4J1K1 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
Trav4-3A0A0B4J1K1 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
Trav4-3A0A0B4J1K1 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
Trav4-3A0A0B4J1K1 Mir758-201ENSMUST00000103260 81 ntBASIC0.74□□□□□ -2.29
Trav4-3A0A0B4J1K1 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm12636-201ENSMUST00000117395 624 ntBASIC0.74□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm13751-201ENSMUST00000120280 752 ntBASIC0.74□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm11430-201ENSMUST00000121317 217 ntBASIC0.74□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm14840-201ENSMUST00000122135 594 ntBASIC0.74□□□□□ -2.29
Trav4-3A0A0B4J1K1 Mup-ps12-201ENSMUST00000126217 549 ntBASIC0.74□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC0.74□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm26089-201ENSMUST00000157898 107 ntBASIC0.74□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm27520-201ENSMUST00000184872 81 ntBASIC0.74□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm29299-201ENSMUST00000185609 923 ntBASIC0.74□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
Trav4-3A0A0B4J1K1 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC0.74□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm29740-201ENSMUST00000193182 655 ntBASIC0.74□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm18985-201ENSMUST00000196472 1079 ntBASIC0.74□□□□□ -2.29
Trav4-3A0A0B4J1K1 Igkv1-108-201ENSMUST00000198926 298 ntBASIC0.74□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm45409-201ENSMUST00000211486 252 ntBASIC0.74□□□□□ -2.29
Trav4-3A0A0B4J1K1 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC0.74□□□□□ -2.29
Trav4-3A0A0B4J1K1 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC0.74□□□□□ -2.29
Trav4-3A0A0B4J1K1 AC142113.2-201ENSMUST00000217425 748 ntBASIC0.74□□□□□ -2.29
Trav4-3A0A0B4J1K1 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC0.74□□□□□ -2.29
Trav4-3A0A0B4J1K1 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
Trav4-3A0A0B4J1K1 Snord14a-201ENSMUST00000082807 87 ntBASIC0.74□□□□□ -2.29
Trav4-3A0A0B4J1K1 Mir322-201ENSMUST00000083484 95 ntBASIC0.74□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm16261-201ENSMUST00000096813 205 ntBASIC0.74□□□□□ -2.29
Trav4-3A0A0B4J1K1 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
Trav4-3A0A0B4J1K1 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC0.73□□□□□ -2.29
Trav4-3A0A0B4J1K1 Mir223-201ENSMUST00000102112 110 ntBASIC0.73□□□□□ -2.29
Trav4-3A0A0B4J1K1 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm12393-201ENSMUST00000117084 848 ntBASIC0.73□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm6444-201ENSMUST00000119611 458 ntBASIC0.73□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm8121-201ENSMUST00000153583 499 ntBASIC0.73□□□□□ -2.29
Trav4-3A0A0B4J1K1 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC0.73□□□□□ -2.29
Trav4-3A0A0B4J1K1 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC0.73□□□□□ -2.29
Trav4-3A0A0B4J1K1 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC0.73□□□□□ -2.29
Trav4-3A0A0B4J1K1 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC0.73□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm19140-201ENSMUST00000209790 421 ntBASIC0.73□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm7588-201ENSMUST00000216866 571 ntBASIC0.73□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm2446-201ENSMUST00000220144 772 ntBASIC0.73□□□□□ -2.29
Trav4-3A0A0B4J1K1 AC154828.2-201ENSMUST00000220908 1070 ntBASIC0.73□□□□□ -2.29
Trav4-3A0A0B4J1K1 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
Trav4-3A0A0B4J1K1 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm15084-201ENSMUST00000178585 1502 ntBASIC0.73□□□□□ -2.29
Trav4-3A0A0B4J1K1 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC0.72□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm14882-201ENSMUST00000117216 218 ntBASIC0.72□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm13046-201ENSMUST00000117391 501 ntBASIC0.72□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm13678-201ENSMUST00000118926 340 ntBASIC0.72□□□□□ -2.29
Trav4-3A0A0B4J1K1 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC0.72□□□□□ -2.29
Trav4-3A0A0B4J1K1 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 97 ms