Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm25071-201ENSMUST00000175232 70 ntBASIC4.35□□□□□ -1.71
Trim39Q9ESN2 Gm28097-201ENSMUST00000187333 366 ntBASIC4.35□□□□□ -1.71
Trim39Q9ESN2 Gm38270-201ENSMUST00000192721 407 ntBASIC4.35□□□□□ -1.71
Trim39Q9ESN2 Igkv2-113-201ENSMUST00000196138 362 ntBASIC4.35□□□□□ -1.71
Trim39Q9ESN2 Gm44349-201ENSMUST00000197048 123 ntBASIC4.35□□□□□ -1.71
Trim39Q9ESN2 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC4.35□□□□□ -1.71
Trim39Q9ESN2 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Trim39Q9ESN2 Gm43978-201ENSMUST00000203491 451 ntBASIC4.35□□□□□ -1.71
Trim39Q9ESN2 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC4.35□□□□□ -1.71
Trim39Q9ESN2 AC152062.1-201ENSMUST00000218129 386 ntBASIC4.35□□□□□ -1.71
Trim39Q9ESN2 CT025525.4-201ENSMUST00000227728 277 ntBASIC4.35□□□□□ -1.71
Trim39Q9ESN2 Gm37345-201ENSMUST00000193062 3138 ntBASIC4.35□□□□□ -1.71
Trim39Q9ESN2 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC4.35□□□□□ -1.71
Trim39Q9ESN2 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Trim39Q9ESN2 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Trim39Q9ESN2 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Trim39Q9ESN2 Gm24132-201ENSMUST00000104745 91 ntBASIC4.34□□□□□ -1.71
Trim39Q9ESN2 Gm11819-201ENSMUST00000122192 372 ntBASIC4.34□□□□□ -1.71
Trim39Q9ESN2 Gm23982-201ENSMUST00000157141 106 ntBASIC4.34□□□□□ -1.71
Trim39Q9ESN2 Gm26153-201ENSMUST00000157433 127 ntBASIC4.34□□□□□ -1.71
Trim39Q9ESN2 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Trim39Q9ESN2 Gm4617-201ENSMUST00000178993 331 ntBASIC4.34□□□□□ -1.71
Trim39Q9ESN2 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC4.34□□□□□ -1.71
Trim39Q9ESN2 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC4.34□□□□□ -1.71
Trim39Q9ESN2 Gm37417-201ENSMUST00000195257 454 ntBASIC4.34□□□□□ -1.71
Trim39Q9ESN2 Gm43704-201ENSMUST00000196164 496 ntBASIC4.34□□□□□ -1.71
Trim39Q9ESN2 Gm43724-201ENSMUST00000197516 226 ntBASIC4.34□□□□□ -1.71
Trim39Q9ESN2 Gm45420-201ENSMUST00000211243 425 ntBASIC4.34□□□□□ -1.71
Trim39Q9ESN2 Gm45860-201ENSMUST00000212700 334 ntBASIC4.34□□□□□ -1.71
Trim39Q9ESN2 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC4.34□□□□□ -1.71
Trim39Q9ESN2 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
Trim39Q9ESN2 Gm7422-201ENSMUST00000220115 640 ntBASIC4.34□□□□□ -1.71
Trim39Q9ESN2 Snord15b-201ENSMUST00000083032 145 ntBASIC4.34□□□□□ -1.71
Trim39Q9ESN2 Mir133a-1-201ENSMUST00000083465 68 ntBASIC4.34□□□□□ -1.71
Trim39Q9ESN2 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Trim39Q9ESN2 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Trim39Q9ESN2 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
Trim39Q9ESN2 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
Trim39Q9ESN2 AC144772.3-201ENSMUST00000228829 3126 ntBASIC4.34□□□□□ -1.72
Trim39Q9ESN2 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
Trim39Q9ESN2 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
Trim39Q9ESN2 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
Trim39Q9ESN2 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
Trim39Q9ESN2 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC4.33□□□□□ -1.72
Trim39Q9ESN2 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Trim39Q9ESN2 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
Trim39Q9ESN2 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Trim39Q9ESN2 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Trim39Q9ESN2 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Trim39Q9ESN2 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Trim39Q9ESN2 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Trim39Q9ESN2 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC4.33□□□□□ -1.72
Trim39Q9ESN2 Gm14107-201ENSMUST00000117774 330 ntBASIC4.33□□□□□ -1.72
Trim39Q9ESN2 Gm12808-201ENSMUST00000120597 404 ntBASIC4.33□□□□□ -1.72
Trim39Q9ESN2 Mup-ps20-201ENSMUST00000121132 389 ntBASIC4.33□□□□□ -1.72
Trim39Q9ESN2 Gm16354-201ENSMUST00000155376 150 ntBASIC4.33□□□□□ -1.72
Trim39Q9ESN2 Gm24720-201ENSMUST00000157518 166 ntBASIC4.33□□□□□ -1.72
Trim39Q9ESN2 Gm25599-201ENSMUST00000157816 103 ntBASIC4.33□□□□□ -1.72
Trim39Q9ESN2 Gm26028-201ENSMUST00000158660 294 ntBASIC4.33□□□□□ -1.72
Trim39Q9ESN2 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Trim39Q9ESN2 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Trim39Q9ESN2 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Trim39Q9ESN2 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC4.33□□□□□ -1.72
Trim39Q9ESN2 Gm29596-201ENSMUST00000185710 385 ntBASIC4.33□□□□□ -1.72
Trim39Q9ESN2 Gm42623-201ENSMUST00000197225 379 ntBASIC4.33□□□□□ -1.72
Trim39Q9ESN2 Gm44330-201ENSMUST00000200106 143 ntBASIC4.33□□□□□ -1.72
Trim39Q9ESN2 Gm5876-201ENSMUST00000203735 243 ntBASIC4.33□□□□□ -1.72
Trim39Q9ESN2 Gm44816-201ENSMUST00000206666 477 ntBASIC4.33□□□□□ -1.72
Trim39Q9ESN2 AC123533.1-201ENSMUST00000227782 446 ntBASIC4.33□□□□□ -1.72
Trim39Q9ESN2 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Trim39Q9ESN2 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Trim39Q9ESN2 Gm22294-201ENSMUST00000083308 104 ntBASIC4.33□□□□□ -1.72
Trim39Q9ESN2 Gm26314-201ENSMUST00000083891 107 ntBASIC4.33□□□□□ -1.72
Trim39Q9ESN2 Gm15304-201ENSMUST00000122150 2640 ntBASIC4.33□□□□□ -1.72
Trim39Q9ESN2 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Trim39Q9ESN2 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Trim39Q9ESN2 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
Trim39Q9ESN2 Gm23472-201ENSMUST00000101806 191 ntBASIC4.32□□□□□ -1.72
Trim39Q9ESN2 Gm8145-201ENSMUST00000118220 745 ntBASIC4.32□□□□□ -1.72
Trim39Q9ESN2 Gm13867-201ENSMUST00000120844 395 ntBASIC4.32□□□□□ -1.72
Trim39Q9ESN2 Gm24497-201ENSMUST00000177868 191 ntBASIC4.32□□□□□ -1.72
Trim39Q9ESN2 Gm35702-201ENSMUST00000198653 511 ntBASIC4.32□□□□□ -1.72
Trim39Q9ESN2 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC4.32□□□□□ -1.72
Trim39Q9ESN2 AC164437.2-201ENSMUST00000228915 797 ntBASIC4.32□□□□□ -1.72
Trim39Q9ESN2 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Trim39Q9ESN2 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Trim39Q9ESN2 Gm23444-201ENSMUST00000082922 191 ntBASIC4.32□□□□□ -1.72
Trim39Q9ESN2 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Trim39Q9ESN2 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
Trim39Q9ESN2 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Trim39Q9ESN2 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Trim39Q9ESN2 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
Trim39Q9ESN2 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Trim39Q9ESN2 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Trim39Q9ESN2 Gm44230-201ENSMUST00000203032 3550 ntBASIC4.31□□□□□ -1.72
Trim39Q9ESN2 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC4.31□□□□□ -1.72
Trim39Q9ESN2 Gm12902-201ENSMUST00000118389 322 ntBASIC4.31□□□□□ -1.72
Trim39Q9ESN2 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC4.31□□□□□ -1.72
Trim39Q9ESN2 Gm25115-201ENSMUST00000157187 140 ntBASIC4.31□□□□□ -1.72
Trim39Q9ESN2 Gm25383-201ENSMUST00000157810 144 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 88.8 ms